MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-158O03
Chromosome	9 (Build37)
Map Location	10,734,908 - 10,736,107
singlet/doublet	singlet
Overlap gene	LOC665178
Upstream gene	Cntn5, LOC665154, LOC100039970
Downstream gene	none
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cntn5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244682 MGI:3042287
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins

name	LOC665154 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665154
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins pseudo : _no_value

name	LOC100039970 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039970
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs

name	LOC665178 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665178
definition	note : CD2-associated protein pseudogene pseudo : _no_value

name	Cntn5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259445 GeneID:244682 MGI:3042287
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins product : contactin 5 transcript_id : XM_974864.2

name	LOC100039970 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259457 GeneID:100039970
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs product : hypothetical protein LOC100039970 transcript_id : XM_001473774.1

name	Cntn5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259446 GeneID:244682 MGI:3042287
definition	codon_start : 1 product : contactin 5 protein_id : XP_979958.2

name	LOC100039970 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259458 GeneID:100039970
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473824.1

name	LOC665178 (CDS detail)
type	misc_feature
link	vega ensembl
xref
definition	note : clone_boundary; clone_end:T7; site:EcoRI pseudo : _no_value

name	(CDS detail)
type	misc_feature
link
xref
definition	note : wgs_end_extension; clone_end:T7

name	LOC665154 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259447 GeneID:665154
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins product : similar to MGC27348 protein pseudo : _no_value transcript_id : XR_031035.1

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : single clone coverage

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : <30 qual single clone coverage

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : <30 qual single clone coverage

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : <30 qual single clone coverage

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : <30 qual SNGL region

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : <30 qual SNGL region

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : <30 qual SNGL region

clone name	MSMg01-494C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409G03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-145L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171C19
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-158O03.b	B6Ng01-158O03.g
ACC	DH952709	DH952710
length	1,085	1,190
definition	DH952709\|Mus musculus domesticus DNA, BAC clone: B6Ng01-158O03, 5' end.	DH952710\|Mus musculus domesticus DNA, BAC clone: B6Ng01-158O03, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcagtaagaatgttgtctattcagtgacattcagaatttcctttag tattttaagagagatagtgaaagaaatcaggcattactatctactacatc gagttagaaatctcagggcaagcttagcaacgtaagtttagaattcttat tatagttatatatggcagactacattacttattagtagaaagtcccccca cactatcacttaagataaaaaccaagtcgctctaatatacaggaatttac aatggtttaggaagtatatcgggctgtggttttagagtattgcattattt atgagaaggttagctagagggaactccctaattagaaccatgacttgggc atgaaagcccttgccctgggagtataaagacctcacacctggcttctaag aatatggctgaccttagatagagctgactttgtctcagttgttttatttc ccagttcctgccagtctttgtgcttacattcttctgttttgtgtaagagt catttgtaccttgccaatatgtcacctaacttccctattttcttctctat aaaaagtatgatgcttgatttgacaaattacactcagtttcaacacactc tcttgtgtcgcatctgtttgtcacccactttcaacgactccttcgcccac ctgcaaccagagacctgttccacgcagataggagaccccaaaaaaggggt tagtctgtggcaggtaagcctcatttctagcagtaggtagccaacacaaa atgaactcgatggaatttcctgaggttccttctctcataatggtaagtct agacattttatttctacactacaggtcctttggatgtgtatttcatggaa tctagttttggatttttatttaattcctgtctgtgggagtctgtgtgttt ctgctatttttgtgctttttctttggcttttttctatttgtttgtttgtt tgccttttgtcatattctaatttgtgtataatttgttatcttattttatt ttccatagctacctgttggttttcataagagcaagaacttgtggatccag ttggaagaaagttgaaaagaaatatgggaaggagt	gaattcagccacatccacaaaccaaagctattaagaagaagacaaagaaa gcatcagtgtaaagttcgttttgactgctctccacaagatgcgggtgaac tggaactgaccatggggatgttattgatgtcatcaaagaggtagaagaag gccggtggaacggaaccctgaacaataagttggcactgtttccttcaaac tttgtgaaagaattagagttcacagatgatggcgaaactcatgatgctca ggaggaatcagaaattcctttgactggccctacctcactcacccttgcct tctccagggaattggagtgaacctgctcccggatcagttgcacagccaaa gaaaatctgaagaattagattttgaggcatctttaaagaaggctatgtga aacttaggacaagaacttccagtattgaaacagaagagaaaaacaaacaa acaaacaacaacaaaacccagaaaagcctttagttctacagtcattggga tctagaacccagaatgtggaggcagtaaaaccagacattgatggcaagag taaagctaaggaatattgtagaacattatttccctatgcaggaaccaatc aagatgaacttatgtttagaggaggggagattatccatttgataagtaag gggactggagaagcaggctggtggaagggactgtttccacataacttgcc gttcagataagtgaacaagataaagactttccaaaaccaaagaaatcaca tcctcctgaaaaggtccagctccaaagcctgactcgtagctgcagagaag aaagcttttcctctaaaggctgaggaaaagatgaaaaatcactgctagaa cagaatcttctaaatcagctgctcctcaagtcctctccaaaaagctcact ccatccaccaaagccaataacttactgaggtcgtctggaacagtgaaccc aaagcggccagaaaagccagtcccttcttccacctccaacagccaaaata atggagaagtttctacatttcttcaaagattgatactgagccagtattca accaaagctagattcctgaacaactaactgccagtagaacaaaatagtag aacctgataccttgtagccagaacacaaaagccacagaatatggtaaatt tgataactgctttctcaagaccttggtaacctcactgcaa
quality values	Open. Hide. 61 47 43 30 61 38 29 47 61 61 61 55 61 41 30 30 47 61 59 61 61 61 61 61 61 22 13 18 13 28 16 26 28 38 55 59 43 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 59 59 55 44 59 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 55 61 61 61 61 61 61 61 61 59 59 61 59 59 61 61 61 61 61 61 61 61 55 61 59 55 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 47 57 57 57 57 47 53 53 52 57 57 39 57 57 57 57 57 47 47 57 57 57 57 53 32 57 57 47 57 53 57 47 57 57 53 47 53 53 57 57 47 38 53 53 50 57 53 57 57 53 57 53 57 57 57 42 57 50 53 45 52 53 53 53 53 57 50 57 47 57 53 53 40 37 47 25 43 57 57 57 53 50 38 57 53 53 53 45 53 42 53 50 53 45 45 50 41 33 43 38 53 53 53 53 52 50 32 43 36 43 52 32 37 31 46 53 57 30 39 37 43 24 45 45 53 50 38 52 42 50 37 57 57 24 52 30 53 38 46 27 53 53 57 57 44 17 57 41 47 24 33 47 42 44 50 39 53 40 53 52 28 37 11 57 31 40 37 31 45 53 52 33 37 44 57 57 37 35 37 40 47 35 33 36 48 16 53 34 48 37 35 53 19 53 35 35 41 37 53 57 57 34 40 33 37 27 41 33 30 30 27 35 53 31 44 30 57 40 33 37 32 44 32 12 44 23 25 21 32 36 48 30 33 32 30 27 27 38 32 32 32 31 46 32 39 48 27 30 30 30 31 34 39 24 29 48 51 51 35 29 28 51 41 37 31 28 29 21 33 28 24 32 25 29 45 25 28 30 29 51 29 30 33 30 23 41 25 43 29 28 29 51 29 35 29 29 29 39 29 31 29 35 34 35 29 29 51 51 30 26 26 29 21 51 51 51 36 28 27 51 36 26 30 29 43 29 29 27 36 25 31 28 36 21 41 46 33 32 16 28 28 28 43 25 43 27 26 14 51 28 22 20 21 25 34 29 29 51 51 51 30 20 13 21 25 28 36 38 36 22 28 15 51 29 20 29 29 41 36 41 46 36 29 15 8 16 12 51 24 28 12 32 18 33 16 38 25 32 15 38 25 26 27 26 22 38 36 22 32 10 22 17 14 29 17 28 20 11 28 30 9 32 20 33 6 16 6 19 10 5 25 6 35 23 31 23 19 6 5 15 9 18 33 18 35 44 15 19 17 42 44 24 18 28 15 16 31 22 30 20 23 30 31 13 29 6 12 27 23 22 35 42 15 19 6 4 14 20 5 29 9 15 15 14 6 6 8 9 5 5 6 5 5 21 5 7 11 10 19 6 6 8 14 19 5 5 10 3 12 10 28 5 4 14 6 6 6 4 4 4 8 9 4 3 3 4 11 4 3 4 6 5 3 4 3	Open. Hide. 61 49 52 49 19 15 12 11 19 16 11 19 11 27 26 32 37 61 52 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 59 59 59 49 44 43 36 39 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 59 61 61 61 61 61 59 61 55 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 52 59 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 59 59 55 59 59 61 61 61 61 61 61 59 59 55 61 61 61 61 59 59 59 59 59 61 59 61 61 59 59 61 61 59 59 59 59 59 59 61 59 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 55 55 61 61 61 61 55 55 61 61 61 61 55 61 55 55 55 61 52 61 55 61 61 61 55 61 61 61 61 61 61 55 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 52 52 55 55 55 55 61 61 61 61 61 61 50 50 61 41 55 50 61 61 61 61 61 55 55 55 61 55 61 50 61 61 61 55 61 50 55 50 55 55 55 55 55 50 50 61 61 61 61 61 55 55 55 55 50 49 61 61 61 61 61 61 61 50 50 50 53 50 50 50 53 43 50 50 50 43 50 50 50 43 50 50 43 38 50 33 42 52 50 50 50 50 50 42 61 61 61 52 50 30 50 50 52 61 61 61 61 61 50 53 50 53 43 50 47 47 50 61 61 61 61 61 61 53 61 61 61 52 53 50 47 47 43 45 40 61 61 61 61 50 57 57 53 47 53 42 47 53 53 52 47 42 42 47 47 38 42 53 53 50 53 53 57 47 53 57 57 45 43 53 57 57 52 53 50 45 45 47 42 47 38 53 40 57 53 53 52 50 47 57 57 50 57 35 53 47 42 34 47 53 50 52 50 47 30 34 26 32 42 53 47 45 45 39 53 47 43 39 39 27 39 47 38 45 53 53 52 36 50 47 43 43 38 47 50 57 57 53 57 43 50 53 53 31 46 52 23 43 43 57 52 33 31 23 57 42 41 26 25 27 34 43 57 52 43 40 27 57 34 43 50 42 27 57 38 52 34 16 46 53 57 52 27 53 53 23 34 25 8 41 32 50 50 57 30 57 47 37 40 28 57 36 38 17 39 53 47 38 42 26 22 19 34 24 39 32 53 30 33 43 38 26 37 37 40 33 35 36 31 42 21 26 41 30 39 40 31 45 33 16 53 33 37 24 33 57 57 41 48 30 41 47 27 12 22 20 37 38 33 18 20 24 33 57 44 14 8 7 5 10 8 10 7 5 9 10 28 17 20 29 40 51 45 45 30 9 14 15 26 30 23 30 29 31 17 41 17 27 30 29 22 20 29 48 31 16 7 25 16 24 44 24 29 31 30 24 24 31 41 29 39 41 26 47 46 36 29 23 29 46 51 28 23 29 29 26 29 22 51 29 28 41 14 29 29 31 14 29 29 51 51 30 20 19 17 26 29 46 51 46 27 34 31 23 26 32 41 28 38 28 29 29 23 14 24 11 21 17 5 10 10 17 27 28 15 10 8 4 10 13 19 31 35 29 25 27 16 18 20 18 22 20 28 31 23 21 5 5 5 12 10 18 18 51 51 29 29 29 5 15 8 8 43 16 9 10 6 8 8 8 8 9 8 12 20 23 17 8 10 10 23 16 26 23 29 31 23 20 27 35 28 21 31 21 20 12 6 29 22 25 22 23 9 17 23 15 26 19 18 24 19 18 18 8 28 15 17 20 13 21 7 18 17 29 34 29 22 19 16 22 27 17 28 24 19 31 18 8 9 32 13 13 28 10 6 12 14 13 5 18 9 8 13 17 19 9 15 12 26 23 23 9 5 5 7 23 16 18 11 17 34 13 22 25 16 16 7 7 8 9 6 30 23 18 10 32 16 6 30 6 7 28 24 17 33 15 23 17 23 29 23 23 22 13 13 9 29 13 11 16 6 4 7 11 4 7 8 21 24 20 18 29 11 14 5 13 20 8 8 14 14 10 7 12 7 6 8 13 5 9 7 17 19 7 9 7 6 17 5 6 12 7 5 2 8 36 6 7 5 8 7 10 6 10 8 13 8 21 6 5 16 11 12 8 11 12 11 10 11 4 3 13 5 21 10 9 8 9 10 9 27 27 24 6 5 9 16 5 4 4 13 16 8 21 5 16 7 3 4 5 8 14 29 17 16 6 5 8 6 3 3 1 5 8 19 20 9 5 5 12 13 4 14 4 6 16 11 3 4 18 5 9 17 6 11 7 7 4 4 6 4 6 7

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_10734908_10736107
seq2: B6Ng01-158O03.g_68_1257

seq1  GAATTCAGCCACATCCACAAACCAAAGCTATTAAGAAGAAGACAAAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCACATCCACAAACCAAAGCTATTAAGAAGAAGACAAAGAAA  50

seq1  GCATCAGTGTAAAGTTCGTTTTGACTGCTCTCCACAAGATGCGGGTGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGTGTAAAGTTCGTTTTGACTGCTCTCCACAAGATGCGGGTGAAC  100

seq1  TGGAACTGACCATGGGGATGTTATTGATGTCATCAAAGAGGTAGAAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTGACCATGGGGATGTTATTGATGTCATCAAAGAGGTAGAAGAAG  150

seq1  GCCGGTGGAACGGAACCCTGAACAATAAGTTGGCACTGTTTCCTTCAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGTGGAACGGAACCCTGAACAATAAGTTGGCACTGTTTCCTTCAAAC  200

seq1  TTTGTGAAAGAATTAGAGTTCACAGATGATGGCGAAACTCATGATGCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGAAAGAATTAGAGTTCACAGATGATGGCGAAACTCATGATGCTCA  250

seq1  GGAGGAATCAGAAATTCCTTTGACTGGCCCTACCTCACTCACCCTTGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAATCAGAAATTCCTTTGACTGGCCCTACCTCACTCACCCTTGCCT  300

seq1  TCTCCAGGGAATTGGAGTGAACCTGCTCCCGGATCAGTTGCACAGCCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGGGAATTGGAGTGAACCTGCTCCCGGATCAGTTGCACAGCCAAA  350

seq1  GAAAATCTGAAGAATTAGATTTTGAGGCATCTTTAAAGAAGGCTATGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCTGAAGAATTAGATTTTGAGGCATCTTTAAAGAAGGCTATGTGA  400

seq1  AACTTAGGACAAGAACTTCCAGTATTGAAACAGAAGAGAAAAACAAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAGGACAAGAACTTCCAGTATTGAAACAGAAGAGAAAAACAAACAA  450

seq1  ACAAACAACAACAAAACCCAGAAAAGCCTTTAGTTCTACAGTCATTGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAACAACAAAACCCAGAAAAGCCTTTAGTTCTACAGTCATTGGGA  500

seq1  TCTAGAACCCAGAATGTGGAGGCAGTAAAACCAGACATTGATGGCAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAACCCAGAATGTGGAGGCAGTAAAACCAGACATTGATGGCAAGAG  550

seq1  TAAAGCTAAGGAATATTGTAGAACATTATTTCCCTATGCAGGAACCAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTAAGGAATATTGTAGAACATTATTTCCCTATGCAGGAACCAATC  600

seq1  AAGATGAACTTATGTTTAGAGGAGGGGAGATTATCCATTTGATAAGTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAACTTATGTTTAGAGGAGGGGAGATTATCCATTTGATAAGTAAG  650

seq1  GGGACTGGAGAAGCAGGCTGGTGGAAGGGACTGTTTCCACATAACTTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTGGAGAAGCAGGCTGGTGGAAGGGACTGTTTCCACATAACTTGCC  700

seq1  GTTCAGATAAGTGAACAAGATAAAGACTTTCCAAAACCAAAGAAACCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTTCAGATAAGTGAACAAGATAAAGACTTTCCAAAACCAAAGAAATCACA  750

seq1  CCCTCCTGAAAAGGTCCAGCTCCAAAGCCTGACCCGTAGCTGCAGAGAAG  800
       |||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCCTCCTGAAAAGGTCCAGCTCCAAAGCCTGACTCGTAGCTGCAGAGAAG  800

seq1  AAAGCTTTTCCTCTAAAGGCTGAGGAAAAGATGAAAAATCACTGCTAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTTTCCTCTAAAGGCTGAGGAAAAGATGAAAAATCACTGCTAGAA  850

seq1  CAGAACCTTCTAAACCAGCTGCTCCTCAAGTCCCACCCAAAAAGCCCACT  900
      ||||| |||||||| ||||||||||||||||||   ||||||||| ||||
seq2  CAGAATCTTCTAAATCAGCTGCTCCTCAAGTCCTCTCCAAAAAGCTCACT  900

seq1  CCACCCACCAAAGCCAATAACTTACTGAGGTCGCCTGGAACAGTGAACCC  950
      ||| ||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CCATCCACCAAAGCCAATAACTTACTGAGGTCGTCTGGAACAGTGAACCC  950

seq1  AAAGCGGCCAGAAAAGCCAGTCCC-TCCTCCACCTCCAACAGCCAAAATT  999
      |||||||||||||||||||||||| || |||||||||||||||||||| |
seq2  AAAGCGGCCAGAAAAGCCAGTCCCTTCTTCCACCTCCAACAGCCAAAA-T  999

seq1  AATGGAGAAGTTTCTACAATTTCTTCAAAGATTGATACTGAGCCAGTATC  1049
      ||||||||||||||||| ||||||||||||||||||||||||||||||| 
seq2  AATGGAGAAGTTTCTAC-ATTTCTTCAAAGATTGATACTGAGCCAGTAT-  1047

seq1  AAAACCAAAGCTAGATT-CTGAACAACTAACTGCCAGTTAGACCAAAATC  1098
        ||||||||||||||| ||||||||||||||||||| |||| |||||| 
seq2  TCAACCAAAGCTAGATTCCTGAACAACTAACTGCCAG-TAGAACAAAAT-  1095

seq1  AGTAGACCTTGATACCTTTGTAGCCAGGAACACAAAAGCAACAGATAATG  1148
      |||||| | ||||||| ||||||||| |||||||||||| |||||  |||
seq2  AGTAGAACCTGATACC-TTGTAGCCA-GAACACAAAAGCCACAGAATATG  1143

seq1  TAAATTTTGATAACATAGCCTTTCTCAAAGAACTTGTTACACCTCACTGC  1198
        || |||||||||     ||||||| |||| |||| || ||||||||||
seq2  GTAAATTTGATAAC---TGCTTTCTC-AAGACCTTGGTA-ACCTCACTGC  1188

seq1  AA  1200
      ||
seq2  AA  1190

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information