BAC Information

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BAC

Clone NameB6Ng01-160L19
Chromosome9 (Build37)
Map Location 16,330,497 - 16,331,242
singlet/doubletsinglet
Overlap genenone
Upstream geneBC017612, Ccdc67, LOC665461, LOC330891, Slc36a4, Mtnr1b, Fat3
Downstream geneEG434373, LOC100040074, LOC100040090
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160L19.bB6Ng01-160L19.g
ACCDH954033DH954034
length7451,209
definitionDH954033|Mus musculus domesticus DNA, BAC clone: B6Ng01-160L19, 5' end.DH954034|Mus musculus domesticus DNA, BAC clone: B6Ng01-160L19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtcacaagaggcatcttgtttgattctagagagattcctccct
ccctcacatcattgtctcctctgtctatccaatttatatacccagatgaa
ctatcatttaagaattagagcaaaaaagaagtagcttaatatgtttaaag
ctctatggagtcatcacactcagaatctgattgaagcagcctttcaggaa
gcaggaaaatggaaccaaagagaaaaataaaagaaaacaagaacaccagc
tgagcagaaactgataactttctgggaaatcagccattttaagtgcaagt
gaactcctttttttttttttttttcttcttcactaaaatggagaagtaag
taattccaatatggatagggagcactgccacttatgaagaaggtctttag
tggaaaattacgtgataagtaatccaaggtcttaagctaatcatgaaaat
cctgagacatgatagatgcatttatacatttatgacataatttaagggtg
aggcaaactgtggtcgtgtatgcctttaatattcacacttggcaagctga
ggtgtggcaaggggataatgagttcaaggttaaccaaaccacaagagtaa
gaccttttctccaaacaaacaaacaaacaaacaaacaaacaacagaaaat
ttcaggacaaagacaaaaaataaaggtaaactataacaaggagaactcag
aactattaaaagtgtgtgtgtgtatgtgtgtgtgtgtgtggtgtg
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctggattctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtcttttttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcgccgcctgagaagctctgtggctcttgtccggaaggaggc
cggccgtctggagctgaggatggcgctgcctcagaagctctgtggctctt
gtcgggaaggtggctggttgtctggagctgaagatggcgccgggaggctg
atttctttggacaatatcctattttagtttactgagcaattgtagtacag
cagacaactgatcaagaaatgatccaactgtgatcacagcttgtacatca
taggaaaagactggaaagtaaaagcagagaaagatgagaacaaaggaact
gggtctagtcctagaaagcttgaaactactggctttctgaggaagcatat
acatcagtggccaccgtggaagtgcaacaaggtgaaactgaacctttgtc
ttgcttgcaggtagctaagcagacaattgaactgctgtctggcttgagaa
acgggacattaaatctcaaattcaagtgtgcagtcctcatgcatttagat
tctagattcctctcatgaatcaggggtatgacccagtgtctggggcctca
ctttgtaacagcaaagaactcactgcctcattcatcatctttgttcccag
gctgggaccatgtccgaaccacttccttaggtaaggatagattggggata
gaccgaattgcgtataatataccggagtttttccgccactgtaaggtgca
cgttcgcatggttgcaattacggttccttgatttcagtgagaagctatat
taaagatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_16330497_16331242
seq2: B6Ng01-160L19.b_42_786

seq1  GAATTCTGTCACAAGAGGCATCTTGTTTGATTCTAGAGAGATTCCTCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCACAAGAGGCATCTTGTTTGATTCTAGAGAGATTCCTCCCT  50

seq1  CCCTCACATCATTGTCTCCTCTGTCTATCCAATTTATATACCCAGATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCACATCATTGTCTCCTCTGTCTATCCAATTTATATACCCAGATGAA  100

seq1  CTATCATTTAAGAATTAGAGCAAAAAAGAAGTAGCTTAATATGTTTAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATTTAAGAATTAGAGCAAAAAAGAAGTAGCTTAATATGTTTAAAG  150

seq1  CTCTATGGAGTCATCACACTCAGAATCTGATTGAAGCAGCCTTTCAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGGAGTCATCACACTCAGAATCTGATTGAAGCAGCCTTTCAGGAA  200

seq1  GCAGGAAAATGGAACCAAAGAGAAAAATAAAAGAAAACAAGAACACCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAAATGGAACCAAAGAGAAAAATAAAAGAAAACAAGAACACCAGC  250

seq1  TGAGCAGAAACTGATAACTTTCTGGGAAATCAGCCATTTTAAGTGCAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGAAACTGATAACTTTCTGGGAAATCAGCCATTTTAAGTGCAAGT  300

seq1  GAACTCCTTTTTTTTTTTTTTTTTCTTCTTCACTAAAATGGAGAAGTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCCTTTTTTTTTTTTTTTTTCTTCTTCACTAAAATGGAGAAGTAAG  350

seq1  TAATTCCAATATGGATAGGGAGCACTGCCACTTATGAAGAAGGTCTTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCCAATATGGATAGGGAGCACTGCCACTTATGAAGAAGGTCTTTAG  400

seq1  TGGAAAATTACGTGATAAGTAATCCAAGGTCTTAAGCTAATCATGAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAATTACGTGATAAGTAATCCAAGGTCTTAAGCTAATCATGAAAAT  450

seq1  CCTGAGACATGATAGATGCATTTATACATTTATGACATAATTTAAGGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGACATGATAGATGCATTTATACATTTATGACATAATTTAAGGGTG  500

seq1  AGGCAAACTGTGGTCGTGTATGCCTTTAATATTCACACTTGGCAAGCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAACTGTGGTCGTGTATGCCTTTAATATTCACACTTGGCAAGCTGA  550

seq1  GGTGTGGCAAGGGGATAATGAGTTCAAGGTTAACCAAACCACAAGAGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGGCAAGGGGATAATGAGTTCAAGGTTAACCAAACCACAAGAGTAA  600

seq1  GACCTTTTCTCCAAACAAACAAACAAACAAACAAACAAACAACAGAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTTCTCCAAACAAACAAACAAACAAACAAACAAACAACAGAAAAT  650

seq1  TTCAGGACAAAGACAAAAAATAAAGGTAAACTATAACAAGGAGAACTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGACAAAGACAAAAAATAAAGGTAAACTATAACAAGGAGAACTCAG  700

seq1  AACTATTAAAAGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTG  746
      |||||||||||||||||||||||||||||||||||||||| |||||
seq2  AACTATTAAAAGTGTGTGTGTGTATGTGTGTGTGTGTGTG-GTGTG  745