BAC Information

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BAC

Clone NameB6Ng01-163I21
Chromosome9 (Build37)
Map Location 32,831,804 - 32,897,617
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC666619, LOC666622, Grit, Kcnj5, Kcnj1, Fli1, LOC669759, LOC100041398, Ets1, LOC100041426
Downstream geneLOC100042343
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163I21.bB6Ng01-163I21.g
ACCDH956110DH956111
length5281,107
definitionDH956110|Mus musculus domesticus DNA, BAC clone: B6Ng01-163I21, 5' end.DH956111|Mus musculus domesticus DNA, BAC clone: B6Ng01-163I21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,831,804 - 32,832,337)(32,896,506 - 32,897,617)
sequence
ctagaggagacattctgggttgtggaagaaatctgaacacacaagtagag
aacatgtgcttggtttaccagtgagataaacaaagctatagagtaaagac
atatagaaacagttcggactgagtccccgacactgccctgtagagagtga
gagatggaggtagaaatggcagatggagaaatggcagagtctaccatggg
tgcttgggaaactggatggtactgcctgctccagacgtgctttgattgca
tgaaaaaagcagatttgattttaattttaaaagaaagaagagaaggcatt
tgagagggagctggggttgggggcggttgggaagggttgcagggagggaa
agaatgagggaaatgatgtaatgatattttaattaaataaaaacacttag
aatttacttacacttagaatttacttttagatttattgtgaatgtgcatc
cctttcccccccacatccctgtgtatgtgtgtgtatgtgtgtgtgtgtgc
gcatatgcacatggggtggggggaggtg
gaattcacactgcctccacttgataacacagaatgagtgactccatgcat
tgctcctttgctcaaaacttcccatcttgtggagttcagcctgccagggt
agtcgagatgcagatgagacagcatcataatgagcatggccaacatctct
gtctcagcctcgatcatgataagggacacctttgagaacctgagctaaaa
tcttcacttgtttcctttaactctttcatctccaaaggacccactcattg
gaggtaacccattttgaataatatatgaacactatcattgatgaaatcat
tctaaaaatactacaaagccataacaggccagagcatggctggagacact
tgagagtagtagtgctgctgatattagaatccaccctgataaatccctaa
tacagatgcagtgcttccaaatagcatggagccctgacagccccttcact
gtccagttgcttcacatggccgccgtttgagaaagatttcccttgatgcc
atacgttgacatcccttctggctagatttcctgctatagtttgctactac
aaatataagaacaaatggaatgaacagccagaaaatgtctcccacataca
gaacagagaaaagggcagcactcagctagccgacacttccttaggacgga
ggttgcttcagtctttcttcttgcttctcaccagcctttttatatctgaa
agaggagtgacatgattggagttatgagcataagaagtaatagcatagat
tgagaactaatactattatttgcactttgtggctttatattctcttgcaa
atgaatatttcaatgaaacatttctttttttatgcagtctgttcaggtcc
taaaatcctgaaagcaaatgaaataaaactaagaatgttaaagtgagtca
caaacaccaaaacctaggagaaattattatattttcagtatttattcttt
cactgagtatgcttaaaggcatgctttttcttctgtttttccttgcacag
gagagctttgagcaggaaacccagagtcagagaatataatactaaagaag
tatttgttcaggagcaactttacttcgcttcagtctaataaatcttacct
cttacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_32831804_32832337
seq2: B6Ng01-163I21.b_47_580

seq1  GAATTCCTAGAGGAGACATTCTGGGTTGTGGAAGAAATCTGAACACACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGAGGAGACATTCTGGGTTGTGGAAGAAATCTGAACACACAA  50

seq1  GTAGAGAACATGTGCTTGGTTTACCAGTGAGATAAACAAAGCTATAGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGAACATGTGCTTGGTTTACCAGTGAGATAAACAAAGCTATAGAGT  100

seq1  AAAGACATATAGAAACAGTTCGGACTGAGTCCCCGACACTGCCCTGTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACATATAGAAACAGTTCGGACTGAGTCCCCGACACTGCCCTGTAGA  150

seq1  GAGTGAGAGATGGAGGTAGAAATGGCAGATGGAGAAATGGCAGAGTCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGAGATGGAGGTAGAAATGGCAGATGGAGAAATGGCAGAGTCTAC  200

seq1  CATGGGTGCTTGGGAAACTGGATGGTACTGCCTGCTCCAGACGTGCTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGTGCTTGGGAAACTGGATGGTACTGCCTGCTCCAGACGTGCTTTG  250

seq1  ATTGCATGAAAAAAGCAGATTTGATTTTAATTTTAAAAGAAAGAAGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATGAAAAAAGCAGATTTGATTTTAATTTTAAAAGAAAGAAGAGAA  300

seq1  GGCATTTGAGAGGGAGCTGGGGTTGGGGGCGGTTGGGAAGGGTTGCAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTGAGAGGGAGCTGGGGTTGGGGGCGGTTGGGAAGGGTTGCAGGG  350

seq1  AGGGAAAGAATGAGGGAAATGATGTAATGATATTTTAATTAAATAAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAGAATGAGGGAAATGATGTAATGATATTTTAATTAAATAAAAAC  400

seq1  ACTTAGAATTTACTTACACTTAGAATTTACTTTTAGATTTATTGTGAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGAATTTACTTACACTTAGAATTTACTTTTAGATTTATTGTGAATG  450

seq1  TGCATCCCTTTCCCCCCCACATCCCTGTGTATGTGTGTGTATGTGTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCCCTTTCCCCCCCACATCCCTGTGTATGTGTGTGTATGTGTGTGT  500

seq1  GTGTGCGCATATGCACATGGGGTGGGGGGAGGTG  534
      ||||||||||||||||||||||||||||||||||
seq2  GTGTGCGCATATGCACATGGGGTGGGGGGAGGTG  534

seq1: chr9_32896506_32897617
seq2: B6Ng01-163I21.g_68_1174 (reverse)

seq1  TTGTAAGAGGGTTAAGATTTA-TAGACTGAAGCGAAGT-AAGTTGCTCCT  48
      ||||||||||  ||||||||| |||||||||||||||| |||||||||||
seq2  TTGTAAGAGG--TAAGATTTATTAGACTGAAGCGAAGTAAAGTTGCTCCT  48

seq1  GAACAAATACTTCTTTTAGTA-TATATTCTCTGACTCTGGGTTTCTTGCT  97
      ||||||||||||| ||||||| ||||||||||||||||||||||| ||||
seq2  GAACAAATACTTC-TTTAGTATTATATTCTCTGACTCTGGGTTTCCTGCT  97

seq1  CAAAGCTTCTTCCTTGTGCAAGGAAAAACAGAAGAAAAAGCATGCCTTTA  147
      |||||| |||  | ||||||||||||||||||||||||||||||||||||
seq2  CAAAGC-TCT--CCTGTGCAAGGAAAAACAGAAGAAAAAGCATGCCTTTA  144

seq1  AGCATACTCAGTGAAAGAATAAATACTGAAAATATTAATAATTTCTCCTA  197
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGCATACTCAGTGAAAGAATAAATACTGAAAATA-TAATAATTTCTCCTA  193

seq1  GGTTTTGGTGTTTGTGACTCACTTTAACATTCTTAGTTTTATTTTCATTT  247
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGTTTTGGTGTTTGTGACTCACTTTAACATTCTTAGTTTTA-TTTCATTT  242

seq1  GCTTTCAGGATTTTAGGACCTGAACAGACTGCATAAAAAAAGAAATGTTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCAGGATTTTAGGACCTGAACAGACTGCATAAAAAAAGAAATGTTT  292

seq1  CATTGAAATATTCATTTGCAAGAGAATATAAAGCCACAAAGTGCAAATAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAAATATTCATTTGCAAGAGAATATAAAGCCACAAAGTGCAAATAA  342

seq1  TAGTATTAGTTCTCAATCTATGCTATTACTTCTTATGCTCATAACTCCAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTAGTTCTCAATCTATGCTATTACTTCTTATGCTCATAACTCCAA  392

seq1  TCATGTCACTCCTCTTTCAGATATAAAAAGGCTGGTGAGAAGCAAGAAGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCACTCCTCTTTCAGATATAAAAAGGCTGGTGAGAAGCAAGAAGA  442

seq1  AAGACTGAAGCAACCTCCGTCCTAAGGAAGTGTCGGCTAGCTGAGTGCTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGAAGCAACCTCCGTCCTAAGGAAGTGTCGGCTAGCTGAGTGCTG  492

seq1  CCCTTTTCTCTGTTCTGTATGTGGGAGACATTTTCTGGCTGTTCATTCCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTCTCTGTTCTGTATGTGGGAGACATTTTCTGGCTGTTCATTCCA  542

seq1  TTTGTTCTTATATTTGTAGTAGCAAACTATAGCAGGAAATCTAGCCAGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTTATATTTGTAGTAGCAAACTATAGCAGGAAATCTAGCCAGAA  592

seq1  GGGATGTCAACGTATGGCATCAAGGGAAATCTTTCTCAAACGGCGGCCAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGTCAACGTATGGCATCAAGGGAAATCTTTCTCAAACGGCGGCCAT  642

seq1  GTGAAGCAACTGGACAGTGAAGGGGCTGTCAGGGCTCCATGCTATTTGGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGCAACTGGACAGTGAAGGGGCTGTCAGGGCTCCATGCTATTTGGA  692

seq1  AGCACTGCATCTGTATTAGGGATTTATCAGGGTGGATTCTAATATCAGCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGCATCTGTATTAGGGATTTATCAGGGTGGATTCTAATATCAGCA  742

seq1  GCACTACTACTCTCAAGTGTCTCCAGCCATGCTCTGGCCTGTTATGGCTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTACTACTCTCAAGTGTCTCCAGCCATGCTCTGGCCTGTTATGGCTT  792

seq1  TGTAGTATTTTTAGAATGATTTCATCAATGATAGTGTTCATATATTATTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTATTTTTAGAATGATTTCATCAATGATAGTGTTCATATATTATTC  842

seq1  AAAATGGGTTACCTCCAATGAGTGGGTCCTTTGGAGATGAAAGAGTTAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGGTTACCTCCAATGAGTGGGTCCTTTGGAGATGAAAGAGTTAAA  892

seq1  GGAAACAAGTGAAGATTTTAGCTCAGGTTCTCAAAGGTGTCCCTTATCAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAAGTGAAGATTTTAGCTCAGGTTCTCAAAGGTGTCCCTTATCAT  942

seq1  GATCGAGGCTGAGACAGAGATGTTGGCCATGCTCATTATGATGCTGTCTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCGAGGCTGAGACAGAGATGTTGGCCATGCTCATTATGATGCTGTCTC  992

seq1  ATCTGCATCTCGACTACCCTGGCAGGCTGAACTCCACAAGATGGGAAGTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCATCTCGACTACCCTGGCAGGCTGAACTCCACAAGATGGGAAGTT  1042

seq1  TTGAGCAAAGGAGCAATGCATGGAGTCACTCATTCTGTGTTATCAAGTGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCAAAGGAGCAATGCATGGAGTCACTCATTCTGTGTTATCAAGTGG  1092

seq1  AGGCAGTGTGAATTC  1112
      |||||||||||||||
seq2  AGGCAGTGTGAATTC  1107