BAC Information

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BAC

Clone NameB6Ng01-164B20
Chromosome9 (Build37)
Map Location 39,561,154 - 39,561,997
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933, Olfr934, Olfr935, Olfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1, Olfr27, Olfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945, GA_x5J8B7W60AJ-354484-355428, Olfr947-ps1, Olfr948, LOC667312, Olfr949-ps1, Olfr950-ps1, Olfr951, Olfr952, Olfr953-ps1, Olfr954, Olfr955, Olfr956-ps1, Olfr44, Olfr957, Olfr958, Olfr959, AW551984, Olfr148, Olfr960, Olfr961, GA_x5J8B7W60AJ-4787-4010, Olfr963, Olfr964-ps1, Olfr149, Olfr965, Olfr966-ps1, Olfr150, Olfr967
Downstream geneOlfr968, Olfr969, Olfr970, Olfr971, Olfr972, Olfr973, LOC100043015, Olfr974, Olfr975, Olfr976, Olfr977-ps1, Olfr978, Olfr979, Olfr980, Olfr981, 1700001J11Rik, Olfr982, Olfr983, Olfr984, Olfr985, 1700030E15Rik, LOC235279, Olfr986, Zfp202, Scn3b, Gramd1b, LOC270148, 9030425E11Rik, LOC100043076
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164B20.bB6Ng01-164B20.g
ACCDH956529DH956530
length844972
definitionDH956529|Mus musculus domesticus DNA, BAC clone: B6Ng01-164B20, 5' end.DH956530|Mus musculus domesticus DNA, BAC clone: B6Ng01-164B20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctagctggattctaaaatgtattcttacagccacagataagtgt
agcccccaattcttacaaaagacgattctctttgtaacaaagactgttag
agaaaaaaaccaagggtagttataataaatacaacaattgctcctaaaga
ttcctttgcctacagagaccttctacaaagactagaaaatgtctccctct
gaatcatatataatagtcatgcggggtcactgaggtgtgtatttgatgcc
atttcctcagaatgctgaggccccaccttacttagcttctctgtatgtgt
gtttttgtgtgtctgtcgttttgtcattctgcttttagggtttctaagat
gaaacaccatggtcaaaagtaacgtgggaagaaaagggtttatttcactt
atatgtccacatcacagttcatcactgcaagtagtcaaggcaggaactca
aacagggaaggaactggaggcaggagctgatgcagggccataaagaaatg
agtactgcttactgtcttgtatgtatggctttctcagtttactttcttat
agaacccaggaccacacacctagagatagcaccatctataatggactgag
tcttcccacaaagtctcttactaagaaaattatgtataggcttgcctgca
gcctgaattttatggaggcatttctcctttcagattatactatcttgtgt
cagattgacataagactagccaggacaatttctgttgctccttgtcatga
aaagttccagcaatataggacaccacagtcacagtcacctaccacaaatt
ctctctctctctctctctctctctctctctctctctctctctct
gaattcctgatatttccaagacttttttcaggaaagggtgttggattttg
tcaaatgctttctcagcctctaatgagataatcatgtggtttttgtcttt
gagtttatttatatagtggattatgttgatggattttcatacactgaacc
atccctgcgtccctgggatgatgcctacttgatcatagtggatgatcatt
ttgatgtgttcttgaatttggtttgtaaaaattctattcagtacttttgc
attgatattcataagggaaattggtctgaagttctttttcttttatgtgg
tttagatagcagagtaatggtggcttcatagaacaaattgggtagagtac
cttttgtttctattttgtgaaatagtttgaggaatattggaattaggtct
tttttgaaagtctgatagaactctgcactaaacacataaggtcttgggtt
ttttattgttgggagactattaatgactgcttttatttctttaggggatt
tgggactgtttagatcattaatctgatcctgatttaactttggtaccggg
catctgtctagaagattgtctatttcatctaggttttccagtcatgttaa
gtatagcctttcgtagtaggatcttatgattttttttttggattttcctc
aaattctgttgttatgtctctgttttcatttctgattttgttaattagga
tactgttcctgtgctctctagtgagtctggctaagggtttatctatcttg
ttatttttctcaaagaaccatctcctggtttggttgattttttgtatatt
tctttttgttctatttgtttgatttcagactggagtttgattatttcctg
ccatctatttctctggctaaattgttccatttgttctagagctttatgtt
gtactgtcaagctgctagttatcctctctccggagctttttggaagcact
cagagctatgagttttcctctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_39561154_39561997
seq2: B6Ng01-164B20.b_48_891

seq1  GAATTCCTAGCTGGATTCTAAAATGTATTCTTACAGCCACAGATAAGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGCTGGATTCTAAAATGTATTCTTACAGCCACAGATAAGTGT  50

seq1  AGCCCCCAATTCTTACAAAAGACGATTCTCTTTGTAACAAAGACTGTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCCAATTCTTACAAAAGACGATTCTCTTTGTAACAAAGACTGTTAG  100

seq1  AGAAAAAAACCAAGGGTAGTTATAATAAATACAACAATTGCTCCTAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAACCAAGGGTAGTTATAATAAATACAACAATTGCTCCTAAAGA  150

seq1  TTCCTTTGCCTACAGAGACCTTCTACAAAGACTAGAAAATGTCTCCCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGCCTACAGAGACCTTCTACAAAGACTAGAAAATGTCTCCCTCT  200

seq1  GAATCATATATAATAGTCATGCGGGGTCACTGAGGTGTGTATTTGATGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCATATATAATAGTCATGCGGGGTCACTGAGGTGTGTATTTGATGCC  250

seq1  ATTTCCTCAGAATGCTGAGGCCCCACCTTACTTAGCTTCTCTGTATGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTCAGAATGCTGAGGCCCCACCTTACTTAGCTTCTCTGTATGTGT  300

seq1  GTTTTTGTGTGTCTGTCGTTTTGTCATTCTGCTTTTAGGGTTTCTAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGTGTGTCTGTCGTTTTGTCATTCTGCTTTTAGGGTTTCTAAGAT  350

seq1  GAAACACCATGGTCAAAAGTAACGTGGGAAGAAAAGGGTTTATTTCACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACCATGGTCAAAAGTAACGTGGGAAGAAAAGGGTTTATTTCACTT  400

seq1  ATATGTCCACATCACAGTTCATCACTGCAAGTAGTCAAGGCAGGAACTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTCCACATCACAGTTCATCACTGCAAGTAGTCAAGGCAGGAACTCA  450

seq1  AACAGGGAAGGAACTGGAGGCAGGAGCTGATGCAGGGCCATAAAGAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGAAGGAACTGGAGGCAGGAGCTGATGCAGGGCCATAAAGAAATG  500

seq1  AGTACTGCTTACTGTCTTGTATGTATGGCTTTCTCAGTTTACTTTCTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTGCTTACTGTCTTGTATGTATGGCTTTCTCAGTTTACTTTCTTAT  550

seq1  AGAACCCAGGACCACACACCTAGAGATAGCACCATCTATAATGGACTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCAGGACCACACACCTAGAGATAGCACCATCTATAATGGACTGAG  600

seq1  TCTTCCCACAAAGTCTCTTACTAAGAAAATTATGTATAGGCTTGCCTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCACAAAGTCTCTTACTAAGAAAATTATGTATAGGCTTGCCTGCA  650

seq1  GCCTGAATTTTATGGAGGCATTTCTCCTTTCAGATTATACTATCTTGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAATTTTATGGAGGCATTTCTCCTTTCAGATTATACTATCTTGTGT  700

seq1  CAGATTGACATAAGACTAGCCAGGACAATTTCTGTTGCTCCTTGTCATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTGACATAAGACTAGCCAGGACAATTTCTGTTGCTCCTTGTCATGA  750

seq1  AAAGTTCCAGCAATATAGGACACCACAGTCACAGTCACCTACCACAAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCCAGCAATATAGGACACCACAGTCACAGTCACCTACCACAAATT  800

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  844
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  844