BAC Information

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BAC

Clone NameB6Ng01-165L22
Chromosome9 (Build37)
Map Location 11,999,053 - 11,999,953
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039989
Downstream geneLOC622505, LOC100039680, LOC665285
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165L22.bB6Ng01-165L22.g
ACCDH957721DH957722
length9011,138
definitionDH957721|Mus musculus domesticus DNA, BAC clone: B6Ng01-165L22, 5' end.DH957722|Mus musculus domesticus DNA, BAC clone: B6Ng01-165L22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttacaaataagaaatcaagaacattacacaataattttgtatga
tctttatatattattttatgcataaaattatacaaatagtattgacatga
ctttatatgatttaacaactgtgaatatattataaaaatatatttacaga
actatatattatattcatacactatatacatgtttacatctataaatata
aacagataattatgtatacagatatatggattagtttaaatccagaagta
aaggaatgtttattatatggaagaattaatgtggaattattgcagtagta
aataaatccaaagaaaagtagaaagatggtatatagatgacaaggaacat
tcgggacataaataaacaacaacataaaacatttaaactttagtgtattc
atagtttgaacactacaattaaaggacacgtttacaattaatgatataaa
tctctcctggggatctatcccataaacaaccaccaaacccagacactatc
gtggaggccaacaagagcttgctgacaggagcctggtatagctttctcct
gagaggctctgccagtgcctgacaaacacagaagtggatgctcacagcca
tccattggatgaagcacagggtccccaatgcaggagttggagaaaggacc
catggaccagaaggggtttgcagccccataggaggaactacaatatgaac
taaccagtactcctagagctccctgtgactaaaccaccaaccaaagaaaa
cacatggtgcgactcatggctctagatggatatgtagcagatggcctagt
aggtcatcgatgtgagaagaggcccttggtcctgtgaaggttctatgtcc
caatataggggaatgccagggccaggaagtgggagtgggtgggttggtga
g
gaattcacatggaactgtgaatgaaatccacgagccagttctacaggtgt
ttgaatcaaaaagggcagaagcagctctagcggctttatcaaccaaatca
tggccctctgctaaagggccaggcaaacctgtgtgagcttgaatgtgttg
gacaaaaaatggagaacttctatttaaaattgaggattgtaatttattta
acaaataccctatagtggatcgaaaattcaccttccccaccacttccagc
gctgctaacgaattaaccacatactgactatctgaaattagattaaaaga
ttcagtctacaattcaaaacttttataacaatgtgcaactcaataacttg
gggagaagcagggggaaactgtaaagttactggcgtggagccatggacca
aatatgctccgcagcctgtcttagacccatctgtaaaaattaaaggggca
tcaggcaatggcactcgagaagtaattcgtggaaaaacaactggttgagc
tttaatcagctgcaaaatgggatccttagggaaatgattatccatctttc
ccataaagctacatctcaaaattgcccaatcatcaacagtagctgataat
acttctatttgcttcatgttatatggaacaatcaattcctgagggggatt
gccaaaatattgaatacattgttgtaggccaatcaaggccaattgtgcta
ccgaggcagggtaataagacatgatttttgcgggtgaaatcttgggatgt
atccatagcaaaggggtgccctgccagaggactccagtaggctgggtctc
caaggacaggatgcacaaaataataggacagaacagatttcttctcttta
atgctgctgtttgaataccctttttcactaaaacttaacactacaccggc
agattcagtaagctgctggggagagtttaattctatatttccccgtaaaa
ttcatataaatggttgtaattgttttttgttagccaaatagggacgtacc
cacttgtataatccccaattagcctttaaaatcattcgatgcctccaata
ctgtccgattctgaatttctggggagatatctttgactatcaaaatttta
cgtcctaattaatttaccactttcctttgccgagcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_11999053_11999953
seq2: B6Ng01-165L22.b_50_950

seq1  GAATTCTTACAAATAAGAAATCAAGAACATTACACAATAATTTTGTATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACAAATAAGAAATCAAGAACATTACACAATAATTTTGTATGA  50

seq1  TCTTTATATATTATTTTATGCATAAAATTATACAAATAGTATTGACATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATATATTATTTTATGCATAAAATTATACAAATAGTATTGACATGA  100

seq1  CTTTATATGATTTAACAACTGTGAATATATTATAAAAATATATTTACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATATGATTTAACAACTGTGAATATATTATAAAAATATATTTACAGA  150

seq1  ACTATATATTATATTCATACACTATATACATGTTTACATCTATAAATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATATATTATATTCATACACTATATACATGTTTACATCTATAAATATA  200

seq1  AACAGATAATTATGTATACAGATATATGGATTAGTTTAAATCCAGAAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATAATTATGTATACAGATATATGGATTAGTTTAAATCCAGAAGTA  250

seq1  AAGGAATGTTTATTATATGGAAGAATTAATGTGGAATTATTGCAGTAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATGTTTATTATATGGAAGAATTAATGTGGAATTATTGCAGTAGTA  300

seq1  AATAAATCCAAAGAAAAGTAGAAAGATGGTATATAGATGACAAGGAACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATCCAAAGAAAAGTAGAAAGATGGTATATAGATGACAAGGAACAT  350

seq1  TCGGGACATAAATAAACAACAACATAAAACATTTAAACTTTAGTGTATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGACATAAATAAACAACAACATAAAACATTTAAACTTTAGTGTATTC  400

seq1  ATAGTTTGAACACTACAATTAAAGGACACGTTTACAATTAATGATATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTGAACACTACAATTAAAGGACACGTTTACAATTAATGATATAAA  450

seq1  TCTCTCCTGGGGATCTATCCCATAAACAACCACCAAACCCAGACACTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCTGGGGATCTATCCCATAAACAACCACCAAACCCAGACACTATC  500

seq1  GTGGAGGCCAACAAGAGCTTGCTGACAGGAGCCTGGTATAGCTTTCTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGGCCAACAAGAGCTTGCTGACAGGAGCCTGGTATAGCTTTCTCCT  550

seq1  GAGAGGCTCTGCCAGTGCCTGACAAACACAGAAGTGGATGCTCACAGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCTCTGCCAGTGCCTGACAAACACAGAAGTGGATGCTCACAGCCA  600

seq1  TCCATTGGATGAAGCACAGGGTCCCCAATGCAGGAGTTGGAGAAAGGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGGATGAAGCACAGGGTCCCCAATGCAGGAGTTGGAGAAAGGACC  650

seq1  CATGGACCAGAAGGGGTTTGCAGCCCCATAGGAGGAACTACAATATGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGACCAGAAGGGGTTTGCAGCCCCATAGGAGGAACTACAATATGAAC  700

seq1  TAACCAGTACTCCTAGAGCTCCCTGTGACTAAACCACCAACCAAAGAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAGTACTCCTAGAGCTCCCTGTGACTAAACCACCAACCAAAGAAAA  750

seq1  CACATGGTGCGACTCATGGCTCTAGATGGATATGTAGCAGATGGCCTAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGTGCGACTCATGGCTCTAGATGGATATGTAGCAGATGGCCTAGT  800

seq1  AGGTCATCGATGTGAGAAGAGGCCCTTGGTCCTGTGAAGGTTCTATGTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCATCGATGTGAGAAGAGGCCCTTGGTCCTGTGAAGGTTCTATGTCC  850

seq1  CAATATAGGGGAATGCCAGGGCCAGGAAGTGGGAGTGGGTGGGTTGGTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATAGGGGAATGCCAGGGCCAGGAAGTGGGAGTGGGTGGGTTGGTGA  900

seq1  G  901
      |
seq2  G  901