BAC Information

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BAC

Clone NameB6Ng01-168J08
Chromosome9 (Build37)
Map Location 29,913,597 - 29,914,818
singlet/doubletsinglet
Overlap genenone
Upstream geneHnt
Downstream geneSnx19, LOC666478, Adamts15, Adamts8, Zbtb44, BC038156, St14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168J08.b
ACCDH959784
length1,196
definitionDH959784|Mus musculus domesticus DNA, BAC clone: B6Ng01-168J08, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtgggttgataaaatcatcatttgcatgctctcccatcatcct
gaagaccagaaagaaaggcacagggaacttcaagctatgcaggaggatga
agacatccctagtgcagccatagtgtcctcacctgctgggcataagaatg
actctgcagaatcagagggcatggcagtcgagcagtggagagccagggag
aggggctacagagctcctgccaaggggaaaggcctcactcccagcctttt
gttgaggtttgcctctgtaacagtgacaaaagctttcaaggaataattat
agaaccctggggacttcagagagctaaagccactctgtgttctccctctg
gagtgtctctgtaccacataccatgatggaattttatacacactggtgag
attatagccccattctacagagagctgggaaatgtgaagtcaattgtttt
ttctcccatggggagtcctttagaggaccagtatatgactgaactgtgac
gtgcgccaggcaaggaggtaagggcttcgtgaaggggatagctgtcaggc
gagcacaggcttcaaaggtaggaacgcagaatttggggacaaggaaggcc
tggagcagctgtagcgaagtcacaggcctgccaagggtctgaacttttct
ttgatgactcttgcaagggtcccccatgtatttttggttagccacataga
acttggcagctccaattgccgacttaggtgtttagggaagaaacatgctg
atcaggagatgaggctctgggctcaaatgcctgaaaacctctgttaaggg
caagatggggaggtttacagactgcctgcaattcccaaaggaaaacaaaa
gaggcaaataaggggaacagaccaggtagaggatctgcagatccatttgt
atagctaactgaaggcatcatagagctctccctggtgccacacaggcctg
gacatggagctgggactcaaacagccacacctcagacacagtaatgaagc
cgagacgtcacatgacagaacagaggaagctgatggtaatatgtctccag
tcttcctttctccgtccaacacagatacataagcagcagcctatgccagg
tcagctgagatatcactgtgacattcttccatgttcgtttaaaatagaaa
cgtgatttagctaactccatgccagtctcaatctgcattccataga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_29913597_29914818
seq2: B6Ng01-168J08.b_46_1241 (reverse)

seq1  TCTATGGGAATGGGCAGAGATTGAGACCTGCATGGAGGTAAGGCTTAATC  50
      ||||| ||||||     ||||||||||  |||||||| ||  ||| ||| 
seq2  TCTAT-GGAATG----CAGATTGAGACTGGCATGGAGTTA--GCTAAAT-  42

seq1  CACTTTTTCTAATATCTAAAGGAACAT-GAAGAATTGTCAC-GTGATATC  98
      |||  ||||||   | |||| |||||| |||||| |||||| ||||||| 
seq2  CAC-GTTTCTA--TTTTAAACGAACATGGAAGAA-TGTCACAGTGATAT-  87

seq1  CTCAAGCTGACCTTGGCCTTAGGCTTCCTGCTTATGTGCTCTGTGTTGGA  148
      ||| |||||||||  | | ||||| | ||||||||||  |||||||||||
seq2  CTC-AGCTGACCT--GGCATAGGC-TGCTGCTTATGT-ATCTGTGTTGGA  132

seq1  CCGGAGAAAGGAAGACTTGGAGAACATATTACCATCAGCTTCCTCTTGTT  198
       ||||||||||||||| ||||| |||||||||||||||||||||| ||||
seq2  -CGGAGAAAGGAAGAC-TGGAG-ACATATTACCATCAGCTTCCTC-TGTT  178

seq1  CTGTCATGTTGACGTTCTCGGCTTCATTACTGTTGTCCTGAGGTGTGGCC  248
      |||||||| ||||| ||||||||||||||||| ||| ||||||||||| |
seq2  CTGTCATG-TGACG-TCTCGGCTTCATTACTG-TGT-CTGAGGTGTGG-C  223

seq1  TGTTTGAGTCCCAGCTCCATGTCCAGGCCTGTGTGGCACCAGGGAGAGCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGAGTCCCAGCTCCATGTCCAGGCCTGTGTGGCACCAGGGAGAGCT  273

seq1  CTATGATGCCTTCAGTTAGCTATACAAATGGATCTGCAGATCCTCTACCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGATGCCTTCAGTTAGCTATACAAATGGATCTGCAGATCCTCTACCT  323

seq1  GGTCTGGTTCCCCTTATTTGCCTCTTTTGTTTTCCTTTGGGAATTGCAGG  398
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCT-GTTCCCCTTATTTGCCTCTTTTGTTTTCCTTTGGGAATTGCAGG  372

seq1  CAGTCTGTAAACCTCCCCATCTTGCCCTTAACAGAGGTTTTCAGGCATTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTGTAAACCTCCCCATCTTGCCCTTAACAGAGGTTTTCAGGCATTT  422

seq1  GAGCCCAGAGCCTCATCTCCTGATCAGCATGTTTCTTCCCTAAACACCTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCAGAGCCTCATCTCCTGATCAGCATGTTTCTTCCCTAAACACCTA  472

seq1  AGTCGGCAATTGGAGCTGCCAAGTTCTATGTGGCTAACCAAAAATACATG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGGCAATTGGAGCTGCCAAGTTCTATGTGGCTAACCAAAAATACATG  522

seq1  GGGGACCCTTGCAAGAGTCATCAAAGAAAAGTTCAGACCCTTGGCAGGCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACCCTTGCAAGAGTCATCAAAGAAAAGTTCAGACCCTTGGCAGGCC  572

seq1  TGTGACTTCGCTACAGCTGCTCCAGGCCTTCCTTGTCCCCAAATTCTGCG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTTCGCTACAGCTGCTCCAGGCCTTCCTTGTCCCCAAATTCTGCG  622

seq1  TTCCTACCTTTGAAGCCTGTGCTCGCCTGACAGCTATCCCCTTCACGAAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTACCTTTGAAGCCTGTGCTCGCCTGACAGCTATCCCCTTCACGAAG  672

seq1  CCCTTACCTCCTTGCCTGGCGCACGTCACAGTTCAGTCATATACTGGTCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTACCTCCTTGCCTGGCGCACGTCACAGTTCAGTCATATACTGGTCC  722

seq1  TCTAAAGGACTCCCCATGGGAGAAAAAACAATTGACTTCACATTTCCCAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGGACTCCCCATGGGAGAAAAAACAATTGACTTCACATTTCCCAG  772

seq1  CTCTCTGTAGAATGGGGCTATAATCTCACCAGTGTGTATAAAATTCCATC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGTAGAATGGGGCTATAATCTCACCAGTGTGTATAAAATTCCATC  822

seq1  ATGGTATGTGGTACAGAGACACTCCAGAGGGAGAACACAGAGTGGCTTTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTATGTGGTACAGAGACACTCCAGAGGGAGAACACAGAGTGGCTTTA  872

seq1  GCTCTCTGAAGTCCCCAGGGTTCTATAATTATTCCTTGAAAGCTTTTGTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTGAAGTCCCCAGGGTTCTATAATTATTCCTTGAAAGCTTTTGTC  922

seq1  ACTGTTACAGAGGCAAACCTCAACAAAAGGCTGGGAGTGAGGCCTTTCCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTACAGAGGCAAACCTCAACAAAAGGCTGGGAGTGAGGCCTTTCCC  972

seq1  CTTGGCAGGAGCTCTGTAGCCCCTCTCCCTGGCTCTCCACTGCTCGACTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCAGGAGCTCTGTAGCCCCTCTCCCTGGCTCTCCACTGCTCGACTG  1022

seq1  CCATGCCCTCTGATTCTGCAGAGTCATTCTTATGCCCAGCAGGTGAGGAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCCTCTGATTCTGCAGAGTCATTCTTATGCCCAGCAGGTGAGGAC  1072

seq1  ACTATGGCTGCACTAGGGATGTCTTCATCCTCCTGCATAGCTTGAAGTTC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGGCTGCACTAGGGATGTCTTCATCCTCCTGCATAGCTTGAAGTTC  1122

seq1  CCTGTGCCTTTCTTTCTGGTCTTCAGGATGATGGGAGAGCATGCAAATGA  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCCTTTCTTTCTGGTCTTCAGGATGATGGGAGAGCATGCAAATGA  1172

seq1  TGATTTTATCAACCCACTGAATTC  1222
      ||||||||||||||||||||||||
seq2  TGATTTTATCAACCCACTGAATTC  1196