BAC Information

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BAC

Clone NameB6Ng01-174I06
Chromosome9 (Build37)
Map Location 3,821,141 - 3,822,035
singlet/doubletsinglet
Overlap geneGucy1a2
Upstream gene4930433N12Rik, LOC664797, Olfr369-ps1, Alkbh8, Cwf19l2, LOC384911
Downstream geneLOC100039236, LOC384912, LOC100039253, Aasdhppt, Kbtbd3, LOC664860, 8430410K20Rik, Gria4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174I06.bB6Ng01-174I06.g
ACCGA002575GA002576
length357897
definitionB6Ng01-174I06.b B6Ng01-174I06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttggagtctgaccctgtccattttactttagccatatttaagcacagtac
aattctgagtaaatatattcagataagaattaattgactaccctgtaagt
acaacaatccttaagacatgtttacattgaagatctatgaagtaatttac
aaagtattgtaagaagtcctcttgttgacttagaaacaatccccaagata
agagctggggagaatgactgaggtaagtgtaatgcctggcactaagaaaa
tatagacatcacttaggctgttgcaaggtataaataatatctctcacaat
gacatagattttggcctaaaaatgatacttaaggttttatgggggagggg
ggtatgg

gaattcaccttggttgaagtgcatgatggctcaaacatatctgcaaacca
catagtatctaggaagcagagaggcaggcaaagggggagagtgtgagaaa
ggatgtatcctgcaagtatattttacaataggctttcaatactttttcaa
tgaactgtcattgactcaagatacaatcatttttcaataattagattgat
caactttggaaagatcaaactctgaacaagaaatctggaggacatttcct
ttctaagcctgtggtggtttgaatatgcttagcccttgggaagtgctact
actaagaagtgtggccttgctggtggaagtgtatcactgtgtaagagggc
ttttagggctcctagtgctcaagcttcacccactttaggagacagtattc
tccttgtagcattcagatggtcgatgtgtaaatagtttcattcaggtagg
agaaatagaccggaattaaattacagactcatgcgtctagaaatcaataa
taataataatgcatttatattttgaaataaatgtgaaaaaataaataaat
gaaacactaattaattgtcttttgccactctataatgtatacatgttttg
aaataaacattgaaatcatatattgaaatgtcactatgagataaagtata
atttttcatttttcaatcaaaataaaactgtccaggtggtcttggcgcat
gcctttggtgccagcactcaggaggcagagtcagagggatctctgatttc
aaagccatcctagtctacagcgtgagttccaggtcagacagagctacaca
gagaaacctctaaaacaaacaaacaaacaaacaaacaaaccaatagatga
tagaaggatggacaggtagattggacacatagatatgtagatacata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_3821141_3822035
seq2: B6Ng01-174I06.g_69_965

seq1  GAATTCACCTTGGTTGAAGTGCATGATGGCTCAAACATATCTGCAAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTTGGTTGAAGTGCATGATGGCTCAAACATATCTGCAAACCA  50

seq1  CATAGTATCTAGGAAGCAGAGAGGCAGGCAAAGGGGGAGAGTGTGAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTATCTAGGAAGCAGAGAGGCAGGCAAAGGGGGAGAGTGTGAGAAA  100

seq1  GGATGTATCCTGCAAGTATATTTTACAATAGGCTTTCAATACTTTTTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTATCCTGCAAGTATATTTTACAATAGGCTTTCAATACTTTTTCAA  150

seq1  TGAACTGTCATTGACTCAAGATACAATCATTTTTCAATAATTAGATTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTGTCATTGACTCAAGATACAATCATTTTTCAATAATTAGATTGAT  200

seq1  CAACTTTGGAAAGATCAAACTCTGAACAAGAAATCTGGAGGACATTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTGGAAAGATCAAACTCTGAACAAGAAATCTGGAGGACATTTCCT  250

seq1  TTCTAAGCCTGTGGTGGTTTGAATATGCTTAGCCCTTGGGAAGTGCTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGCCTGTGGTGGTTTGAATATGCTTAGCCCTTGGGAAGTGCTACT  300

seq1  ACTAAGAAGTGTGGCCTTGCTGGTGGAAGTGTATCACTGTGTAAGAGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGAAGTGTGGCCTTGCTGGTGGAAGTGTATCACTGTGTAAGAGGGC  350

seq1  TTTTAGGGCTCCTAGTGCTCAAGCTTCACCCACTTTAGGAGACAGTATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGGCTCCTAGTGCTCAAGCTTCACCCACTTTAGGAGACAGTATTC  400

seq1  TCCTTGTAGCATTCAGATGGTCGATGTGTAAATAGTTTCATTCAGGTAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTAGCATTCAGATGGTCGATGTGTAAATAGTTTCATTCAGGTAGG  450

seq1  AGAAATAGACCGGAATTAAATTACAGACTCATGCGTCTAGAAATCAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAGACCGGAATTAAATTACAGACTCATGCGTCTAGAAATCAATAA  500

seq1  TAATAATAATGCATTTATATTTTGAAATAAATGTGAAAAAATAAATAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATAATGCATTTATATTTTGAAATAAATGTGAAAAAATAAATAAAT  550

seq1  GAAACACTAATTAATTGTCTTTTGCCACTCTATAATGTATACATGTTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACTAATTAATTGTCTTTTGCCACTCTATAATGTATACATGTTTTG  600

seq1  AAATAAACATTGAAATCATATATTGAAATGTCACTATGAGATAAAGTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACATTGAAATCATATATTGAAATGTCACTATGAGATAAAGTATA  650

seq1  A-TTTTCATTTTTCAATCAAAATAAAACTGTCCAGGTGGTCTTGGCGCAT  699
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCATTTTTCAATCAAAATAAAACTGTCCAGGTGGTCTTGGCGCAT  700

seq1  GCCTTTGGTGCCAGCACTCAGGAGGCAGAGTCAGAGGGATCTCTGATTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTGGTGCCAGCACTCAGGAGGCAGAGTCAGAGGGATCTCTGATTTC  750

seq1  AAAGCCATCCTAGTCTACAGCGTGAGTTCCAGGTCAGACAGAGCTACACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCATCCTAGTCTACAGCGTGAGTTCCAGGTCAGACAGAGCTACACA  800

seq1  GAGAAACCTCAAAAACAAACAAACAAACAAACAAACAAACCAATAGATGA  849
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACCTCTAAAACAAACAAACAAACAAACAAACAAACCAATAGATGA  850

seq1  TAGAAGGAGTGACAGGTAGA-TAGACACATAGATATGTAGATACATA  895
      ||||||||  |||||||||| | ||||||||||||||||||||||||
seq2  TAGAAGGATGGACAGGTAGATTGGACACATAGATATGTAGATACATA  897


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