BAC Information

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BAC

Clone NameB6Ng01-177E11
Chromosome9 (Build37)
Map Location 22,091,480 - 22,248,029
singlet/doubletdoublet
Overlap geneZfp810, LOC100041826, EG625603, Anln, 9530077C05Rik
Upstream geneBC021438, Cdkn2d, Ap1m2, Slc44a2, Ilf3, Qtrt1, Dnm2, Tmed1, AB124611, Carm1, Yipf2, 1810026J23Rik, EG666043, Smarca4, Ldlr, Spc24, Ankrd25, Dock6, EG624219, Rab3d, BC010787, 2510048L02Rik, BC018242, 2310047B19Rik, Epor, Rgl3, C330001K17Rik, Prkcsh, Elavl3, Zfp653, Ecsit, EG625409, Cnn1, Elof1, Acp5, Pigyl, LOC100034724, 9530015I07Rik, 1810064F22Rik, Zfp809, BC050092
Downstream generp9, LOC100041870, Bbs9, LOC100040805, Bmper
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177E11.bB6Ng01-177E11.g
ACCGA004594GA004595
length637856
definitionB6Ng01-177E11.b B6Ng01-177E11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,091,480 - 22,092,116)(22,247,163 - 22,248,029)
sequence
gaattctgtagaaactttagtatatcatatcttatcatctgcaaataagg
gtaatttgactgtttttctcatctgtttccctttaatttcattctcttac
tctctcgcaatccttttagaatgaggttggtggtaagtttgtcatagttt
atgttgaggtatgtccctcctagccccatcacgaaggcatatcggatatt
gccaaaggcctttctgcatctactgcaatgatcatttggtttcatacttg
tatacacttttgtaagtccatcttcaagcagagagagagacagagagaca
gagagagagacagagacaggcagagagaaagagagagagagagacagaga
gagagagagagagagagagagagacagagagacagagagaatgaacttga
aggaggcaggtagtggtggcatgctttacctatcaaggctacactacctc
cacctccactggagaccaagtggtcaaatgcctaagacgatgagggtatt
tctcattcaaaccatcacagcagctatcctccagacctgggtatttttga
gtcttgtggcgtttgtttgtttgtttgtttgttttggttttttttttttt
ttgagacagggtttagtcctgtatagtcctggctgtc
gaattctgattggatgaggtggggtggagctagaaggaagtcagttgccg
tgaggtaagttttagcccttgccttaagtagaagctagttgtagtaagag
aagctgttgtaaggggagttttgtaagaaaagctgcaagaaggagaacaa
gtaaagaagctgttgcgtaaacccgacttggtgtccgtgtcgttcctgtc
accgcaggaacgaaggacctgtagcatatggcctctcataactgagcata
aaaaagaaagtcagcacccgacttcacaccctgtcttggaactaattcag
tctgtgtgagcgttaggcagtgcgctccctgtgtgttcacagcagacttt
tacctttttggtgctactgagaacccaactttggcaaagcatattaggca
agtagtctaccactaagctccatactcaggtaagagagactttaaactca
aacaaattggttgattaaatctaaataaaagacagtgggatcaaatctga
agaagggacactcttacatcctggcttcctgattctgtttattaagccgg
cagacataatttgttagattctcttgctgtaactgaatttttctaagcac
ttaaagaacatggtaaactctccctgctggccagaggtgctctgctgggg
aggaactgtccccacgcttcactcggttcggctcacgattcgtccactgt
ggcatcttggacagctttacagggatggccactccttctgggtcaagatc
agagagtctctcataggagagatgtgtaaaggaaccatgaacctggcctg
aacctgtggtggaggagtcacagtcctcctgggagctactgtactgttgt
aaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_22091480_22092116
seq2: B6Ng01-177E11.b_39_675

seq1  GAATTCTGTAGAAACTTTAGTATATCATATCTTATCATCTGCAAATAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAGAAACTTTAGTATATCATATCTTATCATCTGCAAATAAGG  50

seq1  GTAATTTGACTGTTTTTCTCATCTGTTTCCCTTTAATTTCATTCTCTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTGACTGTTTTTCTCATCTGTTTCCCTTTAATTTCATTCTCTTAC  100

seq1  TCTCTCGCAATCCTTTTAGAATGAGGTTGGTGGTAAGTTTGTCATAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCGCAATCCTTTTAGAATGAGGTTGGTGGTAAGTTTGTCATAGTTT  150

seq1  ATGTTGAGGTATGTCCCTCCTAGCCCCATCACGAAGGCATATCGGATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGAGGTATGTCCCTCCTAGCCCCATCACGAAGGCATATCGGATATT  200

seq1  GCCAAAGGCCTTTCTGCATCTACTGCAATGATCATTTGGTTTCATACTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAGGCCTTTCTGCATCTACTGCAATGATCATTTGGTTTCATACTTG  250

seq1  TATACACTTTTGTAAGTCCATCTTCAAGCAGAGAGAGAGACAGAGAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACTTTTGTAAGTCCATCTTCAAGCAGAGAGAGAGACAGAGAGACA  300

seq1  GAGAGAGAGACAGAGACAGGCAGAGAGAAAGAGAGAGAGAGAGACAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGACAGAGACAGGCAGAGAGAAAGAGAGAGAGAGAGACAGAGA  350

seq1  GAGAGAGAGAGAGAGAGAGAGAGACAGAGAGACAGAGAGAATGAACTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGACAGAGAGACAGAGAGAATGAACTTGA  400

seq1  AGGAGGCAGGTAGTGGTGGCATGCTTTACCTATCAAGGCTACACTACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCAGGTAGTGGTGGCATGCTTTACCTATCAAGGCTACACTACCTC  450

seq1  CACCTCCACTGGAGACCAAGTGGTCAAATGCCTAAGACGATGAGGGTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCACTGGAGACCAAGTGGTCAAATGCCTAAGACGATGAGGGTATT  500

seq1  TCTCATTCAAACCATCACAGCAGCTATCCTCCAGACCTGGGTATTTTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTCAAACCATCACAGCAGCTATCCTCCAGACCTGGGTATTTTTGA  550

seq1  GTCTTGTGGCGTTTGTTTGTTTGTTTGTTTGTTTTGGTTTTTTTTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGTGGCGTTTGTTTGTTTGTTTGTTTGTTTTGGTTTTTTTTTTTTT  600

seq1  TTGAGACAGGGTTTAGTCCTGTATAGTCCTGGCTGTC  637
      |||||||||||||||||||||||||||||||||||||
seq2  TTGAGACAGGGTTTAGTCCTGTATAGTCCTGGCTGTC  637

seq1: chr9_22247163_22248029
seq2: B6Ng01-177E11.g_65_920 (reverse)

seq1  TCCTTTGCCAACAGTAACAGTAGCTTCCCAGCGAGGACTGTGACTCCTCC  50
      ||||||  ||||||| |||||||| |||||| ||||||||||||||||||
seq2  TCCTTT-ACAACAGT-ACAGTAGC-TCCCAG-GAGGACTGTGACTCCTCC  46

seq1  ACCACAGGCTTCAGGCCAGGTTCATGGTTCCTTTACAACATTCTCTCCTA  100
      |||||||| ||||||||||||||||||||||||||| ||| |||||||||
seq2  ACCACAGG-TTCAGGCCAGGTTCATGGTTCCTTTAC-ACA-TCTCTCCTA  93

seq1  TGGAGAGACTCTCTTGATCTTGACCCAGAAGGAGTTGGCCATCCCTGTAA  150
      | ||||||||||| |||||||||||||||||||| |||||||||||||||
seq2  T-GAGAGACTCTC-TGATCTTGACCCAGAAGGAG-TGGCCATCCCTGTAA  140

seq1  AGCTGTCCAAGATGCCACAGTGGACGAATCGCTGAGCCGAACCGAGTGAA  200
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGCTGTCCAAGATGCCACAGTGGACGAATCG-TGAGCCGAACCGAGTGAA  189

seq1  GCGTGGGGACAGTTCCTCCCCAGCAGAGCACCTCTGGCCAGCAGGGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGGGGACAGTTCCTCCCCAGCAGAGCACCTCTGGCCAGCAGGGAGAG  239

seq1  TTTACCATGTTCTTTAAGTGCTTAGAAAAATTCAGTTACAGCAAGAGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCATGTTCTTTAAGTGCTTAGAAAAATTCAGTTACAGCAAGAGAAT  289

seq1  CTAACAAATTATGTCTGCCGGCTTAATAAACAGAATCAGGAAGCCAGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAAATTATGTCTGCCGGCTTAATAAACAGAATCAGGAAGCCAGGAT  339

seq1  GTAAGAGTGTCCCTTCTTCAGATTTGATCCCACTGTCTTTTATTTAGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGTGTCCCTTCTTCAGATTTGATCCCACTGTCTTTTATTTAGATT  389

seq1  TAATCAAGAGATTTGTTTGAGTTTAAAGTCTCTCTTACCTGAGTATGGAG  450
      |||||||   ||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAACCAATTTGTTTGAGTTTAAAGTCTCTCTTACCTGAGTATGGAG  439

seq1  CTTAGTGGTAGACTACTTGCCTAATATGCTTTGCCAAAGTTGGGTTCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTGGTAGACTACTTGCCTAATATGCTTTGCCAAAGTTGGGTTCTCA  489

seq1  GTAGCACCAAAAAGGTAAAAGTCTGCTGTGAACACACAGGGAGCGCACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCACCAAAAAGGTAAAAGTCTGCTGTGAACACACAGGGAGCGCACTG  539

seq1  CCTAACGCTCACACAGACTGAATTAGTTCCAAGACAGGGTGTGAAGTCGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACGCTCACACAGACTGAATTAGTTCCAAGACAGGGTGTGAAGTCGG  589

seq1  GTGCTGACTTTCTTTTTTATGCTCAGTTATGAGAGGCCATATGCTACAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGACTTTCTTTTTTATGCTCAGTTATGAGAGGCCATATGCTACAGG  639

seq1  TCCTTCGTTCCTGCGGTGACAGGAACGACACGGACACCAAGTCGGGTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCGTTCCTGCGGTGACAGGAACGACACGGACACCAAGTCGGGTTTA  689

seq1  CGCAACAGCTTCTTTACTTGTTCTCCTTCTTGCAGCTTTTCTTACAAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAACAGCTTCTTTACTTGTTCTCCTTCTTGCAGCTTTTCTTACAAAAC  739

seq1  TCCCCTTACAACAGCTTCTCTTACTACAACTAGCTTCTACTTAAGGCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTACAACAGCTTCTCTTACTACAACTAGCTTCTACTTAAGGCAAG  789

seq1  GGCTAAAACTTACCTCACGGCAACTGACTTCCTTCTAGCTCCACCCCACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAAACTTACCTCACGGCAACTGACTTCCTTCTAGCTCCACCCCACC  839

seq1  TCATCCAATCAGAATTC  867
      |||||||||||||||||
seq2  TCATCCAATCAGAATTC  856