BAC Information

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BAC

Clone NameB6Ng01-185F03
Chromosome9 (Build37)
Map Location 92,533,307 - 92,534,414
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC331000, Plscr1, Plscr2, 1700057G04Rik, LOC666850, Plscr4, Plod2, LOC100039921
Downstream geneLOC100039931, LOC100039944, LOC667009, LOC100040114, LOC674371
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185F03.bB6Ng01-185F03.g
ACCGA010467GA010468
length9871,119
definitionB6Ng01-185F03.b B6Ng01-185F03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttattgacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagggtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagtttggaattt
taatggggattgcattgaatctgtagattgcttttggcaagatagccatt
ttttacaatgttggtcctgccaatccatgagcatgggagatctttccatc
ttctgagatcttcttttaattttctttctcagggacttgaagttttttat
catacagatctttcactttccttcgttagagtcacgtccgaagataattt
catattatttgtggctattgagaaggggtggttgttt
gaattctgaatatcaaacacacacctgtccccagctccccagcatgcttg
catctcttatagatgagtgtgcctgaagagacttcctcttcagacaccct
ccagtctgagtgggccatcagccagtgtacaaaagtgatcagcagctcag
caagaaaacagctgcttcctagagtttgggcaataattaaaggacattcg
cggtggttttcttcactgggcgctttctggaaactgtggtaagcttcgaa
ataactaaactttccatggtttcagaaaagcagaatggcttgtaggactc
agtcaagagtttcagaaagaactaaaccatgctctgctaacagttcttct
ggactcctgggtgtgcagctcagaaattgatcatgagccactggatggca
gtgatcaagctaaacaaataaagaagaaaagctggggggcaggaaactga
tgctttgaagacatttaagaatgtcaccttccttctgaaagaagcagatg
ttggcataataaaggctgtatttaacaaacccacaggcaacatcatccaa
aatggagaaaaaccagaagctatcttgttaaaataaggaagaaaacaggg
ctatctattataactgctctttttcaatgtagtacttaatgaactaccca
gagtagtaagagaagacaaggaggggccatagaaaagtcactaagagcga
gcacttgtcactttttcagaggatcaagttagattcctagggtccacatg
gcaactatcacctttaattatagctccagaggatccaacaccttcttctg
gactaattccttaggaattataccgacaaatgttctacagacaatcatgt
aggcaaacacccacacagataaaataaaaatcagtacatctgaaatataa
aaatagaacaaggaaatataaaaagaagccaaattatcctgatttgtaaa
tgaatatatttatatgttagagtggaatatatataacataagaagatcct
taagaatcctaccagaaaacactagaaatggattcaacatgttcatcaaa
ttgcaaggatataaaacatacatataaaaattccagtatactctaataca
tccatcacacacaacacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_92533307_92534414
seq2: B6Ng01-185F03.g_66_1184 (reverse)

seq1  GTGTG-TGTGTGTG-----TGTATAGGAAGTATACTGAATTTTTTATATG  44
      ||||| ||||||||     |||||  | ||||||||| | ||||||||||
seq2  GTGTGTTGTGTGTGATGGATGTATTAG-AGTATACTGGAATTTTTATATG  49

seq1  TTGGTTTTATATCTTGACATTTTGATGAACATGTTGA--TCATTTCTAGT  92
      |  |||||||||| |  || |||||||||||||||||   ||||||||||
seq2  TATGTTTTATATCCTTGCAATTTGATGAACATGTTGAATCCATTTCTAGT  99

seq1  GGTTTTCTGGTA-GAATCTTAGGGATC-TCTTATGTATAATATAT--CAC  138
       ||||||||||| || ||||| ||||| ||||||||   ||||||  |||
seq2  -GTTTTCTGGTAGGATTCTTAAGGATCTTCTTATGTTATATATATTCCAC  148

seq1  TCTTACATAT-AATATA-TCATCTACAAATCAGGATAATTTGGCTTCTTT  186
      ||| |||||| |||||| |||| |||||||||||||||||||||||||||
seq2  TCTAACATATAAATATATTCATTTACAAATCAGGATAATTTGGCTTCTTT  198

seq1  TTATATTTCCTTGTTCTATTTTTATATTTCAGATGTACTGATTTTTATTT  236
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTCCTTGTTCTATTTTTATATTTCAGATGTACTGATTTTTATTT  248

seq1  TATCTGTGTGGGTGTTTTGCCTACATGATTGTCTGTAGAACATTTGTCGG  286
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TATCTGTGTGGGTG-TTTGCCTACATGATTGTCTGTAGAACATTTGTCGG  297

seq1  TATAATTCCTAAGGAATTAGTCCAGAAGAAGGTGTTGGATCCTCTGGAGC  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTCCTAAGGAATTAGTCCAGAAGAAGGTGTTGGATCCTCTGGAGC  347

seq1  TATAATTAAAGGTGATAGTTGCCATGTGGACCCTAGGAATCTAACTTGAT  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTAAAGGTGATAGTTGCCATGTGGACCCTAGGAATCTAACTTGAT  397

seq1  CCTCTGAAAAAGTGACAAGTGCTCGCTCTTAGTGACTTTTCTATGGCCCC  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAAAAAGTGACAAGTGCTCGCTCTTAGTGACTTTTCTATGGCCCC  447

seq1  TCCTTGTCTTCTCTTACTACTCTGGGTAGTTCATTAAGTACTACATTGAA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTCTTCTCTTACTACTCTGGGTAGTTCATTAAGTACTACATTGAA  497

seq1  AAAGAGCAGTTATAATAGATAGCCCTGTTTTCTTCCTTATTTTAACAAGA  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCAGTTATAATAGATAGCCCTGTTTTCTTCCTTATTTTAACAAGA  547

seq1  TAGCTTCTGGTTTTTCTCCATTTTGGATGATGTTGCCTGTGGGTTTGTTA  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTCTGGTTTTTCTCCATTTTGGATGATGTTGCCTGTGGGTTTGTTA  597

seq1  AATACAGCCTTTATTATGCCAACATCTGCTTCTTTCAGAAGGAAGGTGAC  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGCCTTTATTATGCCAACATCTGCTTCTTTCAGAAGGAAGGTGAC  647

seq1  ATTCTTAAATGTCTTCAAAGCATCAGTTTCCTGCCCCCCAGCTTTTCTTC  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTAAATGTCTTCAAAGCATCAGTTTCCTGCCCCCCAGCTTTTCTTC  697

seq1  TTTATTTGTTTAGCTTGATCACTGCCATCCAGTGGCTCATGATCAATTTC  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTGTTTAGCTTGATCACTGCCATCCAGTGGCTCATGATCAATTTC  747

seq1  TGAGCTGCACACCCAGGAGTCCAGAAGAACTGTTAGCAGAGCATGGTTTA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGCACACCCAGGAGTCCAGAAGAACTGTTAGCAGAGCATGGTTTA  797

seq1  GTTCTTTCTGAAACTCTTGACTGAGTCCTACAAGCCATTCTGCTTTTCTG  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTCTGAAACTCTTGACTGAGTCCTACAAGCCATTCTGCTTTTCTG  847

seq1  AAACCATGGAAAGTTTAGTTATTTCGAAGCTTACCACAGTTTCCAGAAAG  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATGGAAAGTTTAGTTATTTCGAAGCTTACCACAGTTTCCAGAAAG  897

seq1  CGCCCAGTGAAGAAAACCACCGCGAATGTCCTTTAATTATTGCCCAAACT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCAGTGAAGAAAACCACCGCGAATGTCCTTTAATTATTGCCCAAACT  947

seq1  CTAGGAAGCAGCTGTTTTCTTGCTGAGCTGCTGATCACTTTTGTACACTG  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAAGCAGCTGTTTTCTTGCTGAGCTGCTGATCACTTTTGTACACTG  997

seq1  GCTGATGGCCCACTCAGACTGGAGGGTGTCTGAAGAGGAAGTCTCTTCAG  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATGGCCCACTCAGACTGGAGGGTGTCTGAAGAGGAAGTCTCTTCAG  1047

seq1  GCACACTCATCTATAAGAGATGCAAGCATGCTGGGGAGCTGGGGACAGGT  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACTCATCTATAAGAGATGCAAGCATGCTGGGGAGCTGGGGACAGGT  1097

seq1  GTGTGTTTGATATTCAGAATTC  1108
      ||||||||||||||||||||||
seq2  GTGTGTTTGATATTCAGAATTC  1119