BAC Information

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BAC

Clone NameB6Ng01-187D23
Chromosome9 (Build37)
Map Location 90,664,446 - 90,665,410
singlet/doubletsinglet
Overlap genenone
Upstream geneRasgrf1, Ctsh, Morf4l1, LOC621414, Adamts7, Tbc1d2b, LOC100039777, LOC100039925
Downstream geneEG434428, LOC621576, Zic1, Zic4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187D23.bB6Ng01-187D23.g
ACCGA011873GA011874
length866993
definitionB6Ng01-187D23.b B6Ng01-187D23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgtgtgcagatatcttgttgtgtctagaagatactgatactgg
tttatttgttttgttttgtagtcatcaagtaagtgcctttgtctcttaac
tccttctttctcctcttccataatctttggcataaggggagtgaaatata
tgtcctattgtagactgagcatcctactgttttattccctgaactttgac
caattgtgcttctctgtgttaatcaccatttcctgcaaataggaatgtct
ctgatgagggatgaaaaatgcattagtctatcagtaaaaacaataaatca
gtaggagtcaaactatgtcccttcagcaaaataatagttgtatattctcc
cttaggacccatgaaaataatagtgccaaatatgggctttatcttgtaaa
gaggacctaattctaaagaaaaggtggttggtgtccattgatgtccttgc
tattagtgtagcagttgcaggtcttccaggccagtcactactgtagttca
aagggtttaaaactaggaaagactgatgagtattttacacctccttagta
tgaatagtagttgcctgcattctgaaaggtacccagtagtatgtaggtta
gtattaccttgatgccttcaaggtctatgacttaagcatgtgatgtcttc
tcttactttcatgttccagaaggtaagctggaacactggcaatagccttt
aatatatagtgatctaagaatctaacccaccaaaagatccaaaatatgta
acccattccaagaactatggttttatttgttagcctctgctgctgtctat
tacagacattgtcatcccattagggtaactccatttttaactgtgtgtgt
gtgtgtgtgtgtgtgg
gaattcccttcctgttcactttctgtctgttgaccttagtgttgatttgc
acctctaccgtctggcctgttaacacttccagaatgaaaaccgtaagtct
cccagtctgacttctctccagctcagcatttctacggctttccagtttat
agtttatctctcttcactcagcttaaaatagcttccacattagagtcttt
taattctgtgttgattggctatgtacatcattgggtttttggcccaatga
acaaaagtctcatccacatctttccttgctggaggcccttcctgagactg
catccttataaagctggtaggcaccaagccaatagaattctaacaggcga
gttgtttatcaagaaataaccatgaagcatacttaggaacattattcttc
agtcacattcttataacgttttctgagacatcagttatggacttcttagt
ggactttaactttgtgtttatttatttatttatttatttacttactgaaa
atagtgttttcaaatagtatttcctagttatggtttcctgtcccccaact
cctccaagatcctgccctccacccatcccatctgaattcataccctttat
gtctctcattagaaaatgaagccatttaaaaagtaatagtaatataaaac
aaaaataaacaaacaagataggacaacgcaaacaaatagaaaataattgg
gcaaagaaaaagcagaataaatgtgtataaaaacagaaacacgcacattc
atacttacaggaatcctataacaacacaaaactggaagcctatatatatg
ccagggacctgtaaggggaggctttcagtgagttccagtttagggaattc
tggaccctgtacccaaggtaatgatgtctttatcaaaagggactttacct
gctgtctctgggggcaataaacaaaggcaccagcaatagttctgtaatat
tttggaagcctttgaacaactgcgattaacaactctaactagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_90664446_90665410
seq2: B6Ng01-187D23.g_63_1028

seq1  GAATTCCCTTCCTGTTCACTTTCTGTCTGTTGACCTTAGTGTTGATTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTCCTGTTCACTTTCTGTCTGTTGACCTTAGTGTTGATTTGC  50

seq1  ACCTCTACCGTCTGGCCTGTTAACACTTCCAGAATGAAAACCGTAAGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTACCGTCTGGCCTGTTAACACTTCCAGAATGAAAACCGTAAGTCT  100

seq1  CCCAGTCTGACTTCTCTCCAGCTCAGCATTTCTACGGCTTTCCAGTTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTCTGACTTCTCTCCAGCTCAGCATTTCTACGGCTTTCCAGTTTAT  150

seq1  AGTTTATCTCTCTTCACTCAGCTTAAAATAGCTTCCACATTAGAGTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATCTCTCTTCACTCAGCTTAAAATAGCTTCCACATTAGAGTCTTT  200

seq1  TAATTCTGTGTTGATTGGCTATGTACATCATTGGGTTTTTGGCCCAATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTGTGTTGATTGGCTATGTACATCATTGGGTTTTTGGCCCAATGA  250

seq1  ACAAAAGTCTCATCCACATCTTTCCTTGCTGGAGGCCCTTCCTGAGACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGTCTCATCCACATCTTTCCTTGCTGGAGGCCCTTCCTGAGACTG  300

seq1  CATCCTTATAAAGCTGGTAGGCACCAAGCCAATAGAATTCTAACAGGCGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTATAAAGCTGGTAGGCACCAAGCCAATAGAATTCTAACAGGCGA  350

seq1  GTTGTTTATCAAGAAATAACCATGAAGCATACTTAGGAACATTATTCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTATCAAGAAATAACCATGAAGCATACTTAGGAACATTATTCTTC  400

seq1  AGTCACATTCTTATAACGTTTTCTGAGACATCAGTTATGGACTTCTTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACATTCTTATAACGTTTTCTGAGACATCAGTTATGGACTTCTTAGT  450

seq1  GGACTTTAACTTTGTGTTTATTTATTTATTTATTTATTTACTTACTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTAACTTTGTGTTTATTTATTTATTTATTTATTTACTTACTGAAA  500

seq1  ATAGTGTTTTCAAATAGTATTTCCTAGTTATGGTTTCCTGTCCCCCAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTTTTCAAATAGTATTTCCTAGTTATGGTTTCCTGTCCCCCAACT  550

seq1  CCTCCAAGATCCTGCCCTCCACCCATCCCATCTGAATTCATACCCTTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAAGATCCTGCCCTCCACCCATCCCATCTGAATTCATACCCTTTAT  600

seq1  GTCTCTCATTAGAAAATGAAGCCATTTAAAAAGTAATAGTAATATAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCATTAGAAAATGAAGCCATTTAAAAAGTAATAGTAATATAAAAC  650

seq1  AAAAATAAACAAACAAGATAGGACAACGCAAACAAATAGAAAATAATTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAACAAACAAGATAGGACAACGCAAACAAATAGAAAATAATTGG  700

seq1  GCAAAGAAAAAGCAGAATAAATGTGTATAAAAACAGAAACACGCACATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGAAAAAGCAGAATAAATGTGTATAAAAACAGAAACACGCACATTC  750

seq1  ATACTTACAGGAATCCTATAACAACACAAAACTGGAAGCCTATATATATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTACAGGAATCCTATAACAACACAAAACTGGAAGCCTATATATATG  800

seq1  CCAGGGACCTGTAAGGGGAGGCTTTCAGGTGAGTTCCAGTTTAGGGAATT  850
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCAGGGACCTGTAAGGGGAGGCTTTCA-GTGAGTTCCAGTTTAGGGAATT  849

seq1  CTGGACCCTGTACCCAAGGTAATGATGTCTTTATCAAAAGGGAC-TTACC  899
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTGGACCCTGTACCCAAGGTAATGATGTCTTTATCAAAAGGGACTTTACC  899

seq1  TGCTGTCTCTGGGGGCAATAAACAAAGGCACCAGCAATAG-TCTGTAATA  948
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGCTGTCTCTGGGGGCAATAAACAAAGGCACCAGCAATAGTTCTGTAATA  949

seq1  TTTTGGAAGCCTTTGAA  965
      |||||||||||||||||
seq2  TTTTGGAAGCCTTTGAA  966