BAC Information

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BAC

Clone NameB6Ng01-190I09
Chromosome9 (Build37)
Map Location 22,615,675 - 22,805,586
singlet/doubletdoublet
Overlap geneBbs9
Upstream geneDock6, EG624219, Rab3d, BC010787, 2510048L02Rik, BC018242, 2310047B19Rik, Epor, Rgl3, C330001K17Rik, Prkcsh, Elavl3, Zfp653, Ecsit, EG625409, Cnn1, Elof1, Acp5, Pigyl, LOC100034724, 9530015I07Rik, 1810064F22Rik, Zfp809, BC050092, Zfp810, LOC100041826, EG625603, Anln, 9530077C05Rik, rp9, LOC100041870, LOC100040805
Downstream geneBmper, LOC100040866, LOC100040878, LOC100040893
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190I09.bB6Ng01-190I09.g
ACCGA014258GA014259
length1,2081,134
definitionB6Ng01-190I09.b B6Ng01-190I09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,804,386 - 22,805,586)(22,615,675 - 22,616,820)
sequence
gaattcttttactcctggctaagagtaagtatcattaaaccatccctggg
ggctgtttctttttcttctctatccaacattccataaaacaaaagccagt
taatctgtgaatttctaccctcctccaataccatttttaatagacaaaca
gtcccctgggttccccaaattccttccctggcagcacagatggaagtgga
tagctaagatgtaagagcaaaccttgctaggctctcctccactgggaccc
agaaggcagagctgggtagatgtattcgtttgctgaggctgctgtaacaa
aaaaccctgactgattagctgaaaccacagagctacagtgagagtcctga
gaaccctgagggaagggtgtgttccaggctatgtctttatattctacctt
ctttctttgatagagtgtgtttaaattcacctttcgactctgaaatctgg
tctgggaagttggcactagcctctgaaaacatgaataaatatcagctcca
tcatattatccccattaacacactgtctagaaatggtatgcaaatgtaga
gagagagtgtcacctctgtcccctccctggaagtgatttttctcaagcat
atagtctcccaaaccaatgtagtcatgttacaaaatagtgtcctgacaca
catgacacctcacttgtttttagtgaacttaacactgagctaaaaggaga
aagaagccggacagatggcagtaaggcagagaagtagctgcttcggtgtg
agttgcagtctgccgcttggcaagatggaaatgttccctatttggggctc
attttcagttcagcacatgcacatcacttcctgggtacccctcattagag
tctctcctcagaagccacctctctgcctcactagcaacatgagctctctg
cctgctgcccacctccccagcaccctgtctttttgatatggccattgccc
ccttgctgatagtatcctcaaaaacctgaatccttgaagagagaggccat
gttttatgacagcagacctggcgaaaacaaagaagagtgcttgtctatgt
gcagtaacagcagaaccatcaaacttcaatggtggtaaacaactgagctg
tccttatgggagcagaaaagcaacgacccccacccccccacccttctttt
cctggagatccagttttcttgtaaaatgtctacccaaatgccatctatcc
ctgttaat
gaattcctcttgaaaggattctcaggttcagttttctttttcctaatttg
ctggtggcatctattacagggagatagaaatgggtcaatggaatcaaaag
tcttggtttactgtttatggcagtcagagggaagctccctggtgggtata
gagagactctggactttggtttaagaaccaactctatgtgcctggaagga
atgaggaaggaccctgagctgtgtagtcattgcgcatccagagctcagtt
cagctaccaatagagcagagataaccagaggcttgtaggtaggactccta
ggaagcaggaggcaagtgccctcctaactttaacgccttacaccctctgt
caggaagaccttactcagttatccttaagttgcttttatgggctcttcct
gccatacagcctttacttcttgagcctgccagtttggtccctttggcact
agtacagtgtgctgctgctgtctttgctggcgctgaggtcccagtgcagc
agtgatgttcctaggattgcagcctccacattttaaggtgacaccacatt
tcctggggtctttactgtagctcatacaattgctccgaagaaaaatggga
caaattttgtaccattatttttgccacatgatactgaagtggaactagat
agatccttagagctcccaaaatccctctggagaccagcactatcagattt
tgtcaagactatggctcaaggagctgaaatgtcagtatcttctctccatc
ccaggtgcccctgctgtatctagggcttctgtaagggccagatccttttc
tgcagactgtaaggcagaagaagggacactcctggtagttaagccaccag
atcatcaaacaggcctgcactgggggattgatcttatcactgtgtttcct
attcctggcaccaggacaaagcacttcccacatgtggactcatccaattg
cctcagtccttggggggaggcagtcaaaagaactagtagctcactacctg
aaaaccttgctaacgcctcctcgtacagtacagtcctttggcctgctgtc
atttgtttacaattccaaattggcttgccacacaggctggaagaacgtga
tgctgccattgctaccttttgaaactgccctgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_22804386_22805586
seq2: B6Ng01-190I09.b_45_1252 (reverse)

seq1  ATTAACA-GGATAGATGGCATTGTGGGTAGACATTTTTACAGAAAAACTG  49
      ||||||| |||||||||||||| |||||||||| |||||||  |||||||
seq2  ATTAACAGGGATAGATGGCATT-TGGGTAGACA-TTTTACAAGAAAACTG  48

seq1  GATCT-CAGG-AAAGAAGGGT--GGGGGTGGGGGTCTGTGCTTTTCTGCT  95
      ||||| |||| ||||||||||  |||||||||||||  ||||||||||||
seq2  GATCTCCAGGAAAAGAAGGGTGGGGGGGTGGGGGTCGTTGCTTTTCTGCT  98

seq1  -CCATAAGGACAGCTCAG-TGTTTACCACCATTGAGTTTTGATGG-TCTG  142
       ||||||||||||||||| ||||||||||||||||  |||||||| ||||
seq2  CCCATAAGGACAGCTCAGTTGTTTACCACCATTGAAGTTTGATGGTTCTG  148

seq1  CTGTTACTGCACATAGACAAGCACTCTTCTTTG-TATCGCCAGGTCTGCT  191
      ||||||||||||||||||||||||||||||||| | ||||||||||||||
seq2  CTGTTACTGCACATAGACAAGCACTCTTCTTTGTTTTCGCCAGGTCTGCT  198

seq1  GTCATAAAACATGGCCTCTCTCTTCAAGGATTCAGGTTTTTGAGGATACT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAAAACATGGCCTCTCTCTTCAAGGATTCAGGTTTTTGAGGATACT  248

seq1  ATCAGCAAGGGGGCAATGGCCATATCAAAAAGACAGGGTGCTGGGGAGGT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCAAGGGGGCAATGGCCATATCAAAAAGACAGGGTGCTGGGGAGGT  298

seq1  GGGCAGCAGGCAGAGAGCTCATGTTGCTAGTGAGGCAGAGAGGTGGCTTC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGCAGGCAGAGAGCTCATGTTGCTAGTGAGGCAGAGAGGTGGCTTC  348

seq1  TGAGGAGAGACTCTAATGAGGGGTACCCAGGAAGTGATGTGCATGTGCTG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGAGACTCTAATGAGGGGTACCCAGGAAGTGATGTGCATGTGCTG  398

seq1  AACTGAAAATGAGCCCCAAATAGGGAACATTTCCATCTTGCCAAGCGGCA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAAATGAGCCCCAAATAGGGAACATTTCCATCTTGCCAAGCGGCA  448

seq1  GACTGCAACTCACACCGAAGCAGCTACTTCTCTGCCTTACTGCCATCTGT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCAACTCACACCGAAGCAGCTACTTCTCTGCCTTACTGCCATCTGT  498

seq1  CCGGCTTCTTTCTCCTTTTAGCTCAGTGTTAAGTTCACTAAAAACAAGTG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCTTCTTTCTCCTTTTAGCTCAGTGTTAAGTTCACTAAAAACAAGTG  548

seq1  AGGTGTCATGTGTGTCAGGACACTATTTTGTAACATGACTACATTGGTTT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTCATGTGTGTCAGGACACTATTTTGTAACATGACTACATTGGTTT  598

seq1  GGGAGACTATATGCTTGAGAAAAATCACTTCCAGGGAGGGGACAGAGGTG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGACTATATGCTTGAGAAAAATCACTTCCAGGGAGGGGACAGAGGTG  648

seq1  ACACTCTCTCTCTACATTTGCATACCATTTCTAGACAGTGTGTTAATGGG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTCTCTCTACATTTGCATACCATTTCTAGACAGTGTGTTAATGGG  698

seq1  GATAATATGATGGAGCTGATATTTATTCATGTTTTCAGAGGCTAGTGCCA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATATGATGGAGCTGATATTTATTCATGTTTTCAGAGGCTAGTGCCA  748

seq1  ACTTCCCAGACCAGATTTCAGAGTCGAAAGGTGAATTTAAACACACTCTA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCAGACCAGATTTCAGAGTCGAAAGGTGAATTTAAACACACTCTA  798

seq1  TCAAAGAAAGAAGGTAGAATATAAAGACATAGCCTGGAACACACCCTTCC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAAAGAAGGTAGAATATAAAGACATAGCCTGGAACACACCCTTCC  848

seq1  CTCAGGGTTCTCAGGACTCTCACTGTAGCTCTGTGGTTTCAGCTAATCAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGTTCTCAGGACTCTCACTGTAGCTCTGTGGTTTCAGCTAATCAG  898

seq1  TCAGGGTTTTTTGTTACAGCAGCCTCAGCAAACGAATACATCTACCCAGC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTTTTTTGTTACAGCAGCCTCAGCAAACGAATACATCTACCCAGC  948

seq1  TCTGCCTTCTGGGTCCCAGTGGAGGAGAGCCTAGCAAGGTTTGCTCTTAC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTTCTGGGTCCCAGTGGAGGAGAGCCTAGCAAGGTTTGCTCTTAC  998

seq1  ATCTTAGCTATCCACTTCCATCTGTGCTGCCAGGGAAGGAATTTGGGGAA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGCTATCCACTTCCATCTGTGCTGCCAGGGAAGGAATTTGGGGAA  1048

seq1  CCCAGGGGACTGTTTGTCTATTAAAAATGGTATTGGAGGAGGGTAGAAAT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGGACTGTTTGTCTATTAAAAATGGTATTGGAGGAGGGTAGAAAT  1098

seq1  TCACAGATTAACTGGCTTTTGTTTTATGGAATGTTGGATAGAGAAGAAAA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGATTAACTGGCTTTTGTTTTATGGAATGTTGGATAGAGAAGAAAA  1148

seq1  AGAAACAGCCCCCAGGGATGGTTTAATGATACTTACTCTTAGCCAGGAGT  1191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAGCCCCCAGGGATGGTTTAATGATACTTACTCTTAGCCAGGAGT  1198

seq1  AAAAGAATTC  1201
      ||||||||||
seq2  AAAAGAATTC  1208

seq1: chr9_22615675_22616820
seq2: B6Ng01-190I09.g_66_1199

seq1  GAATTCCTCTTGAAAGGATTCTCAGGTTCAGTTTTCTTTTTCCTAATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTGAAAGGATTCTCAGGTTCAGTTTTCTTTTTCCTAATTTG  50

seq1  CTGGTGGCATCTATTACAGGGAGATAGAAATGGGTCAATGGAATCAAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGCATCTATTACAGGGAGATAGAAATGGGTCAATGGAATCAAAAG  100

seq1  TCTTGGTTTACTGTTTATGGCAGTCAGAGGGAAGCTCCCTGGTGGGTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTTTACTGTTTATGGCAGTCAGAGGGAAGCTCCCTGGTGGGTATA  150

seq1  GAGAGACTCTGGACTTTGGTTTAAGAACCAACTCTATGTGCCTGGAAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACTCTGGACTTTGGTTTAAGAACCAACTCTATGTGCCTGGAAGGA  200

seq1  ATGAGGAAGGACCCTGAGCTGTGTAGTCATTGCGCATCCAGAGCTCAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGAAGGACCCTGAGCTGTGTAGTCATTGCGCATCCAGAGCTCAGTT  250

seq1  CAGCTACCAATAGAGCAGAGATAACCAGAGGCTTGTAGGTAGGACTCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTACCAATAGAGCAGAGATAACCAGAGGCTTGTAGGTAGGACTCCTA  300

seq1  GGAAGCAGGAGGCAAGTGCCCTCCTAACTTTAACGCCTTACACCCTCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCAGGAGGCAAGTGCCCTCCTAACTTTAACGCCTTACACCCTCTGT  350

seq1  CAGGAAGACCTTACTCAGTTATCCTTAAGTTGCTTTTATGGGCTCTTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGACCTTACTCAGTTATCCTTAAGTTGCTTTTATGGGCTCTTCCT  400

seq1  GCCATACAGCCTTTACTTCTTGAGCCTGCCAGTTTGGTCCCTTTGGCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATACAGCCTTTACTTCTTGAGCCTGCCAGTTTGGTCCCTTTGGCACT  450

seq1  AGTACAGTGTGCTGCTGCTGTCTTTGCTGGCGCTGAGGTCCCAGTGCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAGTGTGCTGCTGCTGTCTTTGCTGGCGCTGAGGTCCCAGTGCAGC  500

seq1  AGTGATGTTCCTAGGATTGCAGCCTCCACATTTTAAGGTGACACCACATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGTTCCTAGGATTGCAGCCTCCACATTTTAAGGTGACACCACATT  550

seq1  TCCTGGGGTCTTTACTGTAGCTCATACAATTGCTCCGAAGAAAAATGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGGTCTTTACTGTAGCTCATACAATTGCTCCGAAGAAAAATGGGA  600

seq1  CAAATTTTGTACCATTATTTTTGCCACATGATACTGAAGTGGAACTAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTTGTACCATTATTTTTGCCACATGATACTGAAGTGGAACTAGAT  650

seq1  AGATCCTTAGAGCTCCCAAAATCCCTCTGGAGACCAGCACTATCAGATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTTAGAGCTCCCAAAATCCCTCTGGAGACCAGCACTATCAGATTT  700

seq1  TGTCAAGACTATGGCTCAAGGAGCTGAAATGTCAGTATCTTCTCTCCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAGACTATGGCTCAAGGAGCTGAAATGTCAGTATCTTCTCTCCATC  750

seq1  CCAGGTGCCCCTGCTGTATCTAGGGCTTCTGTAAGGGCCAGATCCTTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTGCCCCTGCTGTATCTAGGGCTTCTGTAAGGGCCAGATCCTTTTC  800

seq1  TGCAGACTGTAAGGCAGAAGAAGGGACACTCCTGGTAGTTAAGCCACCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGACTGTAAGGCAGAAGAAGGGACACTCCTGGTAGTTAAGCCACCAG  850

seq1  ATCATCAAACAGGCCTGCACT-GGGGATTGATCTTATCACTGTGTTTCCT  899
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATCATCAAACAGGCCTGCACTGGGGGATTGATCTTATCACTGTGTTTCCT  900

seq1  ATTCCTGGCA-CAGGACAAAGCACTTCCCACATGTGGACTCATCCAATTG  948
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGGCACCAGGACAAAGCACTTCCCACATGTGGACTCATCCAATTG  950

seq1  CCTCAGTCCTT-GGGGGAGGCAGTCAAAAAGAACTAGTAGCTCACTACCT  997
      ||||||||||| ||||||||||||| ||||||||||||||||||||||||
seq2  CCTCAGTCCTTGGGGGGAGGCAGTC-AAAAGAACTAGTAGCTCACTACCT  999

seq1  GAAAACCTTGCTAACGCCTCCTCGTTAACAGTAACAAGTCCCTTTGGCTT  1047
      |||||||||||||||||||||||||  ||||||   ||| |||||||| |
seq2  GAAAACCTTGCTAACGCCTCCTCGT--ACAGTA--CAGT-CCTTTGGCCT  1044

seq1  GCTGTCATTTGTATACAAATTCCAAATTGGCTTTTGCACACAGGGCTGGG  1097
      |||||||||||| ||| |||||||||||||| ||  |||||| |||| ||
seq2  GCTGTCATTTGTTTAC-AATTCCAAATTGGC-TTGCCACACA-GGCT-GG  1090

seq1  AAGAAACCGTGGATGCTGCCATTGCCTACCTTTTGAAAACCTG-CCTGTC  1146
      |||||  ||| ||||||||||||| |||||||||||||  ||| ||||||
seq2  AAGAA--CGT-GATGCTGCCATTG-CTACCTTTTGAAA--CTGCCCTGTC  1134