MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-190N12
Chromosome	9 (Build37)
Map Location	100,571,584 - 100,571,651
singlet/doublet	singlet
Overlap gene	Stag1
Upstream gene	Cldn18, EG667429, Sox14, LOC667456, 4930519F24Rik, LOC100040590, Il20rb, Nck1, LOC633385, Tmem22, LOC667486
Downstream gene	LOC100040990, Pccb, LOC100041013, LOC100040707, Msl2l1, 3222402P14Rik, LOC100041065, EG382099
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cldn18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56492 MGI:1929209
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667429 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667429 MGI:3644692
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein pseudo : _no_value

name	Sox14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20669 MGI:98362
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs, 49 Proteins

name	LOC667456 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667456
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 51 ESTs pseudo : _no_value

name	4930519F24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108970 MGI:1922047
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040590 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040590
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Il20rb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213208 MGI:2143266
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Nck1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17973 MGI:109601
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC633385 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:633385
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Tmem22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245020 MGI:2685365
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins

name	LOC667486 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667486
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 Proteins pseudo : _no_value

name	Stag1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20842 MGI:1098658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040990 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040990
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein pseudo : _no_value

name	Pccb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66904 MGI:1914154
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041013 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041013
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100040707 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040707
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Msl2l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77853 MGI:1925103
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 180 ESTs, 3 Proteins

name	3222402P14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235542 MGI:2442104
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 218 ESTs, 9 Proteins

name	LOC100041065 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041065
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins pseudo : _no_value

name	EG382099 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382099 MGI:3648529
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 8 Proteins

name	Cldn18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130563 GeneID:56492 MGI:1929209
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : claudin 18 transcript_id : NM_019815.2

name	Sox14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260177 GeneID:20669 MGI:98362
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs, 49 Proteins product : SRY-box containing gene 14 transcript_id : XM_284529.7

name	4930519F24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386346 GeneID:108970 MGI:1922047
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930519F24 gene, transcript variant 2 transcript_id : XM_897583.2

name	Il20rb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370392 GeneID:213208 MGI:2143266
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 20 receptor beta transcript_id : NM_001033543.2

name	Il20rb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82524393 GeneID:213208 MGI:2143266
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 20 receptor beta transcript_id : NM_001037246.1

name	Nck1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328186 GeneID:17973 MGI:109601
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : non-catalytic region of tyrosine kinase adaptor protein 1 transcript_id : NM_010878.2

name	LOC633385 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260185 GeneID:633385
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical LOC633385 transcript_id : XM_001475636.1

name	Tmem22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260187 GeneID:245020 MGI:2685365
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins product : transmembrane protein 22 transcript_id : XM_147067.6

name	Stag1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130461 GeneID:20842 MGI:1098658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stromal antigen 1 transcript_id : NM_009282.3

name	Pccb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348575 GeneID:66904 MGI:1914154
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : propionyl Coenzyme A carboxylase, beta polypeptide transcript_id : NM_025835.2

name	Msl2l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386513 GeneID:77853 MGI:1925103
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 180 ESTs, 3 Proteins product : male-specific lethal 2-like 1 (Drosophila) transcript_id : XM_150227.8

name	3222402P14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260298 GeneID:235542 MGI:2442104
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 202 ESTs, 7 Proteins product : RIKEN cDNA 3222402P14 gene transcript_id : XM_001475836.1

name	EG382099 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386515 GeneID:382099 MGI:3648529
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 8 Proteins product : predicted gene, EG382099, transcript variant 1 transcript_id : XM_356179.5

name	Cldn18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790075 CCDS:CCDS23437.1 GeneID:56492 MGI:1929209
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence ISS] [Evidence IEA] GO_function : GO:0042802 - identical protein binding [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence ISS] codon_start : 1 note : Claudin-18 product : claudin 18 protein_id : NP_062789.1

name	Sox14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260178 GeneID:20669 MGI:98362
definition	codon_start : 1 product : SRY-box 14 protein_id : XP_284529.4

name	4930519F24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82930608 GeneID:108970 MGI:1922047
definition	codon_start : 1 product : hypothetical protein LOC108970 isoform 2 protein_id : XP_902676.1

name	Il20rb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702053 CCDS:CCDS23438.1 GeneID:213208 MGI:2143266
definition	codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2; fibronectin type III domain containing 6 product : fibronectin type III domain containing 6 isoform 2 protein_id : NP_001028715.1

name	Il20rb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82524394 CCDS:CCDS23439.1 GeneID:213208 MGI:2143266
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1; fibronectin type III domain containing 6 product : fibronectin type III domain containing 6 isoform 1 protein_id : NP_001032323.1

name	Nck1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328187 CCDS:CCDS23440.1 GeneID:17973 MGI:109601
definition	GO_component : GO:0012506 - vesicle membrane [Evidence IDA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007015 - actin filament organization [Evidence IMP]; GO:0016477 - cell migration [Evidence IMP]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0030032 - lamellipodium biogenesis [Evidence IMP] codon_start : 1 product : non-catalytic region of tyrosine kinase adaptor protein 1 protein_id : NP_035008.2

name	LOC633385 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260186 GeneID:633385
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475686.1

name	Tmem22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260188 GeneID:245020 MGI:2685365
definition	codon_start : 1 product : similar to Transmembrane protein 22 protein_id : XP_147067.5

name	Stag1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254610 CCDS:CCDS23441.1 GeneID:20842 MGI:1098658
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]; GO:0007126 - meiosis [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA] codon_start : 1 product : stromal antigen 1 protein_id : NP_033308.2

name	Pccb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385310 CCDS:CCDS23442.1 GeneID:66904 MGI:1914154
definition	GO_component : GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004658 - propionyl-CoA carboxylase activity [Evidence ISS] [Evidence IEA] GO_process : GO:0006633 - fatty acid biosynthesis [Evidence IEA] codon_start : 1 product : propionyl Coenzyme A carboxylase, beta polypeptide protein_id : NP_080111.1

name	Msl2l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94386514 GeneID:77853 MGI:1925103
definition	codon_start : 1 product : ring finger protein 184 protein_id : XP_150227.6

name	3222402P14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260299 GeneID:235542 MGI:2442104
definition	codon_start : 1 product : alpha isoform of regulatory subunit B'', protein phosphatase 2 protein_id : XP_001475886.1

name	EG382099 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63592914 GeneID:382099 MGI:3648529
definition	codon_start : 1 product : similar to Small nuclear ribonucleoprotein polypeptide A isoform 1 protein_id : XP_356179.3

name	LOC100040590 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040590
definition	number : 1 pseudo : _no_value

name	LOC667486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667486
definition	number : 4 pseudo : _no_value

name	LOC667486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667486
definition	number : 3 pseudo : _no_value

name	LOC667486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667486
definition	number : 2 pseudo : _no_value

name	LOC667486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667486
definition	number : 1 pseudo : _no_value

name	LOC100041013 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041013
definition	number : 1 pseudo : _no_value

name	LOC100040707 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040707
definition	number : 2 pseudo : _no_value

name	LOC100040707 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040707
definition	number : 1 pseudo : _no_value

name	LOC100041065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041065
definition	number : 1 pseudo : _no_value

name	EG667429 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149260184 GeneID:667429 MGI:3644692
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein product : predicted gene, EG667429 pseudo : _no_value transcript_id : XR_032281.1

name	LOC667456 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260179 GeneID:667456
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 51 ESTs product : similar to membrane-associated ring finger (C3HC4) 5 pseudo : _no_value transcript_id : XR_031975.1

name	LOC100040990 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260189 GeneID:100040990
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein product : similar to adaptor-related protein complex 2, beta 1 subunit pseudo : _no_value transcript_id : XR_032402.1

clone name	MSMg01-497C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344P08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-400J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140F17
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-190N12.b	B6Ng01-190N12.g
ACC	GA014498	GA014499
length	1,157	167
definition	B6Ng01-190N12.b	B6Ng01-190N12.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcatggagagataatgggtgaatttggttttgtcgtggaatacttt ggtttctccatctatggtaattgagagtttggctgggtatagtagcctgg gatggaatttgtgttctcttagtgtctgtataacatctgtccaggctctt ctgggtttcatattctctggtgaaaaatctggtgtaattctgataggctt gcctttatatgttacttgacctttttcccttactccttttagtattctat cttcatttagtgcatttgttgtcctgattattatgtgtcaggaggaattt cttttctggtccagtctatttggagttctgtaggtttcttgtatgttcat gggcatctctttctttagatttgggaagttttcttcaataattttgttta agatgtttgctggtcctttgagttgaaaatctttattctcatccactcct attatccgtaggtttggtcttctcattgtgtcctggatttcctggatgtt ttgagttaggatctttttgcattttccattttctttgattgttgtgccga tgttctctatggaatcttctgcacctgagattctctcttccatctcttgt attctgttgctgatgctcgcatctatggttccagatttctttcctagggt ttctatctccattgttgcctcactttgggttttctttattgtgtctactt ccctttttaggtcttggatgtttttattcaatttcatcacctgtttggtt gtgttttcctgcaattctttaagggatttttgtgtttcctctttcatgtc ttctacttgtttagtagtgttctcctgtatttctttaaagtgagttattt aagtccttctggatgtcttctaccatcatcatgagatatgcttttaaatc caggtctagcttttcaggtgtgttggggtgccctggactgggcgaagtgg gagttctgggttctgatgatggtgagtggtcctggtttctgtagtagatc ttacgtttaccttcacatctggtaatctctggagtagtgttataggttgc tctcgctagagaattatcctcactgggatttgtataccctctatcatcat aacctgggagcactacttctccctcttgaagttcagtgaatagagaggga ctctctg	aaggaaaaactgggcaacttagtttgagcctgtctcagaatttaaaactt tcgaagctgtggatatataggtcagtggtagagtggttgcttaaactgca ttaggctctaaatttaatctccacagaaagagagagggagagagggagag agggagagagggaggga
quality values	Open. Hide. 58 36 35 35 58 26 23 47 62 62 54 62 62 62 37 24 62 62 41 62 62 54 54 62 49 62 47 62 54 62 47 51 59 46 33 37 56 59 28 38 49 62 49 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 59 46 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 49 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 47 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 54 62 62 62 46 62 58 58 58 58 58 54 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 52 58 58 58 58 58 58 58 52 47 58 58 58 58 42 54 39 58 58 58 58 54 58 58 54 58 43 22 58 58 58 58 58 58 58 49 58 54 58 58 58 58 54 58 58 52 58 58 58 49 58 58 58 58 53 53 53 51 51 51 52 53 45 42 31 51 54 49 31 53 58 50 58 54 58 50 58 50 37 58 41 49 31 58 54 52 58 50 53 53 53 53 53 51 50 47 35 58 51 58 52 51 50 42 54 51 50 50 53 58 58 49 41 49 49 40 58 58 49 52 53 58 50 42 53 54 58 53 58 39 51 49 42 53 53 53 41 58 54 50 58 33 41 39 40 26 58 34 53 53 37 58 39 41 28 51 32 58 58 58 41 40 50 51 41 32 50 41 51 46 37 32 42 49 42 42 54 39 51 37 54 47 52 54 30 53 53 37 54 30 54 54 34 39 53 45 51 35 18 34 39 49 32 40 54 28 29 34 13 49 14 37 16 54 54 54 51 51 33 54 38 54 52 52 46 31 46 44 54 33 39 32 34 47 29 54 40 33 52 26 31 33 21 26 40 12 49 53 53 24 31 53 22 32 52 26 33 42 43 34 32 31 40 30 31 33 49 31 35 14 36 53 17 49 11 22 31 34 31 20 32 35 26 17 46 18 26 43 29 31 34 33 22 31 30 30 31 32 31 23 31 30 32 31 31 43 29 36 34 43 28 42 31 31 37 31 26 31 35 38 20 42 33 31 28 36 36 37 46 48 35 27 46 31 38 23 46 30 25 20 25 26 33 34 33 32 18 46 46 31 30 7 8 15 25 31 27 31 19 27 31 48 48 39 29 30 18 39 24 7 9 13 6 9 35 31 41 31 31 14 31 31 18 31 33 44 22 31 9 22 26 32 30 34 48 38 18 31 27 32 27 18 9 28 32 23 23 30 14 16 31 19 27 17 29 20 31 26 31 16 14 4 21 17 31 6 7 22 14 10 13 19 5 22 13 4 12 33 9 11 22 31 40 10 10 23 17 17 16 8 14 31 15 26 14 19 21 25 14 26 17 19 19 13 6 6 24 8 15 7 19 20 7 15 20 7 17 8 5 7 6 4 17 5 6 9 9 11 13 9 7 3 10 5 6 18 6 15 24 28 8 5 5 11 25 8 6 6 6 8 17 5 9 11 8 24 15 6 4 5 5 6 14 25 14 5 17 10 11 3 5 4 4 6 4 4 11 7 12 8 11 16 6 9 6 4 3 11 5 6 5 4 15 17 8 16 4 6 10 5 4 6 6 13 10 14 5 4 23 6 8 5 5 4 4 8 6 9 10 14 4 5 4 3 1 2 1 2 4 9 5 6 8	Open. Hide. 43 59 62 62 59 41 40 40 41 49 38 43 48 51 59 62 62 62 62 62 62 59 62 62 59 59 59 59 62 62 59 59 62 62 62 59 59 62 62 62 59 62 62 62 54 49 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 59 49 62 62 62 62 59 62 59 62 59 59 59 59 62 59 62 62 62 62 62 59 62 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 27 25

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_100571584_100571651
seq2: B6Ng01-190N12.g_192_236 (reverse)

seq1  TCCCTCCCTCTCTCCCTCCTTCCCTCCTCATGTGTTCCCTTCTTTGTCTT  50
      ||||||||||||||||||  ||||||                    ||| 
seq2  TCCCTCCCTCTCTCCCTCTCTCCCTC--------------------TCT-  29

seq1  TGCCCTCTCTCTTTCTGT  68
        ||||||||||||||||
seq2  --CCCTCTCTCTTTCTGT  45

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information