BAC Information

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BAC

Clone NameB6Ng01-193K02
Chromosome9 (Build37)
Map Location 3,069,398 - 3,177,823
singlet/doubletdoublet
Overlap gene4930433N12Rik
Upstream genenone
Downstream geneLOC664797, Olfr369-ps1, Alkbh8, Cwf19l2, LOC384911, Gucy1a2, LOC100039236
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193K02.bB6Ng01-193K02.g
ACCGA016548GA016549
length1,1241,023
definitionB6Ng01-193K02.b B6Ng01-193K02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(3,176,688 - 3,177,823)(3,069,398 - 3,070,410)
sequence
gaattcaaggtggcaatgctcaacatatatacatgtatgaaattgttaaa
aataaattttttgtagagaggagattactgctaataaatgtctagaaatt
taactcttgatccttgggtgggagaaccagagcaccatattgggcacagg
acttaaagaagtacacactcttttaatgtcattcaactcctattaatgtg
gatgccagcctcaggcaccagtgctttcccatggtggaagggcccccaac
aaggatggaatatgccagagagcagacagagtgtcctagtgtccagggca
tgtagctgttggctgtgacctactagagtggcacatgagcatatcaatca
tgccattgtgatttctgtccataagtcagtcctagccagcttgctgatca
ctaagccattttatttctgtgtcaagtgctaaatttgagctcctgagatg
ctgagtaaggttcacacccttactgcaggccctggatgaatcattacccc
ctttcctcagaactaatacagtgatttctgagaccatttcttccattaac
tacacagggctgtgcactcagaaactaaacaaggaggttcaatggagaga
tgaccaaagatttgcagggccttggtagtttctaatgcacatgttcttgc
ataacacagtgatgctggctggacctttatctctgagggctttcagatga
ctgctttaactgacaggtactctgtagtgtttgagaaatgttggctatat
ctgtgcccttagtcagtagcactgtaaagtgttagcagaggacccttagc
cctggcctgctgctgttcccatgggttcagtgagccttactcatgtgcac
cttcccagtgtctgcctccctggtgtgcacttgttactttgtgtgcctgc
tcaggaaacacttgatctctcccatctgtggtggccattgttgtggggac
ctcccagccatactgcatagctcactagctgtccctctgtcaagtcagtc
atgcaatgcatgtatttggaactggaggaggtgcttcagcattgtaaagc
aatgctcataaataggtgataaccttgtactatttacaggcaggaactgg
aggtacagtgcaataaggtgttgt

gaattcagtcatcacaggactgtgccgtaggggagtcagtcatcaaagaa
ctggcagttgggcatcagtcatcacatgactgtgcagtttgggagtctat
aatcaaggactgtgcattttgggagtcagtaattacaggactgtgcagtt
gggcattcaacatcacaggaatgtgcaggtgggcagtcagtcatcacagg
actgtgcagttgtgcagtcagtcatcacaggactgtgcagttgggtagta
atcaaggaactgtgcatttgggcagtcactcatcacaggactgtgcagtt
gggaaatcagttatcacaggactgtgcagttgggcagtcagttatcacaa
gactgtgcagttggtaagtcagtcatcaccggactgtgcagttggggagt
cagtcatcacaggactgtgaagttaggcaatctgtcatcacaagactttc
cagtagggtagtcagtcatcacaggactctgcagttggagagtctgtcat
cacaggactgtgcagttgagcagtcagtcatcacaatgctgtgcagtttg
ggctgtcaatcatcatatgactgtgtagttgggcaatcagttatcacagt
actgtgcagttgagcagtcagtcatcacaggactgtgcagtagggcatca
gtcatcacaggactgtgcagtagggtagtcatcacaggacttttaggttg
ggcagtcaacatcacaggaatgtgcagttgggcagtcagtaatcacagga
ctgtacagtttggcagtcagtcattacaggactctgcaagttcggtagtc
atcaccagactgtgcagttgggcaatcagtcatcacaagactgtcaattg
ggtagtcagtcatcacaggactgtgccatttggcagtcagttattcacag
gtcctgtgccagttgggcaattagttcatcacagaactgtgcaagttggg
tagtcaagtcatcacaaggaactgtgcattttggcagtcagtcaacacag
gcctgtggcattgggttggtccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_3176688_3177823
seq2: B6Ng01-193K02.b_43_1166 (reverse)

seq1  ACAACACACTTAATTGCACTGTACCTCAGTTTCCTGCCTGTAAAATAGGT  50
      ||||||| ||| |||||||||||||||   ||||||||||| ||||| ||
seq2  ACAACAC-CTT-ATTGCACTGTACCTCCAGTTCCTGCCTGT-AAATA-GT  46

seq1  ACAAAGTTATCAACCCTATTTATGAGCAATGCTTTACAATGCTG-AGCAC  99
      |||| |||||||  |||||||||||||| ||||||||||||||| |||||
seq2  ACAAGGTTATCA--CCTATTTATGAGCATTGCTTTACAATGCTGAAGCAC  94

seq1  CTCCTCCAGTTCCCAAATACATGCATTGGCATGAACTGACTTGAACAGAG  149
      ||||||||||| ||||||||||||||| ||||| ||||||||| ||||| 
seq2  CTCCTCCAGTT-CCAAATACATGCATT-GCATG-ACTGACTTG-ACAGA-  139

seq1  GGGACAGGCTAGTGAGCTATGCAGTATGGCTGGGAGGTCCCCACAACAAT  199
      |||||| |||||||||||||||||||||||||||||||||||||||||| 
seq2  GGGACA-GCTAGTGAGCTATGCAGTATGGCTGGGAGGTCCCCACAACAA-  187

seq1  TGGCCACCACAGATGGGAGAGATCAAGTGTGTCCTGGAGCAGGCACACAA  249
      |||||||||||||||||||||||||||||| |||| ||||||||||||||
seq2  TGGCCACCACAGATGGGAGAGATCAAGTGTTTCCT-GAGCAGGCACACAA  236

seq1  AGTAACAAGTGCACACCAGGGAGGCAGACACTGGGAAGGTGCACATGAGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACAAGTGCACACCAGGGAGGCAGACACTGGGAAGGTGCACATGAGT  286

seq1  AAGGCTCACTGAA-CCATGGGAACAGCAGCAGGCCAGGGCTAAGGGTCCT  348
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCACTGAACCCATGGGAACAGCAGCAGGCCAGGGCTAAGGGTCCT  336

seq1  CTGCTAACACTTTACAGTGCTACTGACTAAGGGCACAGATATAGCCAACA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAACACTTTACAGTGCTACTGACTAAGGGCACAGATATAGCCAACA  386

seq1  TTTCTCAAACACTACAGAGTACCTGTCAGTTAAAGCAGTCATCTGAAAGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAAACACTACAGAGTACCTGTCAGTTAAAGCAGTCATCTGAAAGC  436

seq1  CCTCAGAGATAAAGGTCCAGCCAGCATCACTGTGTTATGCAAGAACATGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGAGATAAAGGTCCAGCCAGCATCACTGTGTTATGCAAGAACATGT  486

seq1  GCATTAGAAACTACCAAGGCCCTGCAAATCTTTGGTCATCTCTCCATTGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTAGAAACTACCAAGGCCCTGCAAATCTTTGGTCATCTCTCCATTGA  536

seq1  ACCTCCTTGTTTAGTTTCTGAGTGCACAGCCCTGTGTAGTTAATGGAAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTTGTTTAGTTTCTGAGTGCACAGCCCTGTGTAGTTAATGGAAGA  586

seq1  AATGGTCTCAGAAATCACTGTATTAGTTCTGAGGAAAGGGGGTAATGATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTCTCAGAAATCACTGTATTAGTTCTGAGGAAAGGGGGTAATGATT  636

seq1  CATCCAGGGCCTGCAGTAAGGGTGTGAACCTTACTCAGCATCTCAGGAGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAGGGCCTGCAGTAAGGGTGTGAACCTTACTCAGCATCTCAGGAGC  686

seq1  TCAAATTTAGCACTTGACACAGAAATAAAATGGCTTAGTGATCAGCAAGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTTAGCACTTGACACAGAAATAAAATGGCTTAGTGATCAGCAAGC  736

seq1  TGGCTAGGACTGACTTATGGACAGAAATCACAATGGCATGATTGATATGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAGGACTGACTTATGGACAGAAATCACAATGGCATGATTGATATGC  786

seq1  TCATGTGCCACTCTAGTAGGTCACAGCCAACAGCTACATGCCCTGGACAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGCCACTCTAGTAGGTCACAGCCAACAGCTACATGCCCTGGACAC  836

seq1  TAGGACACTCTGTCTGCTCTCTGGCATATTCCATCCTTGTTGGGGGCCCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACACTCTGTCTGCTCTCTGGCATATTCCATCCTTGTTGGGGGCCCT  886

seq1  TCCACCATGGGAAAGCACTGGTGCCTGAGGCTGGCATCCACATTAATAGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCATGGGAAAGCACTGGTGCCTGAGGCTGGCATCCACATTAATAGG  936

seq1  AGTTGAATGACATTAAAAGAGTGTGTACTTCTTTAAGTCCTGTGCCCAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAATGACATTAAAAGAGTGTGTACTTCTTTAAGTCCTGTGCCCAAT  986

seq1  ATGGTGCTCTGGTTCTCCCACCCAAGGATCAAGAGTTAAATTTCTAGACA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGCTCTGGTTCTCCCACCCAAGGATCAAGAGTTAAATTTCTAGACA  1036

seq1  TTTATTAGCAGTAATCTCCTCTCTACAAAAAATTTATTTTTAACAATTTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAGCAGTAATCTCCTCTCTACAAAAAATTTATTTTTAACAATTTC  1086

seq1  ATACATGTATATATGTTGAGCATTGCCACCTTGAATTC  1136
      ||||||||||||||||||||||||||||||||||||||
seq2  ATACATGTATATATGTTGAGCATTGCCACCTTGAATTC  1124


seq1: chr9_3069398_3070410
seq2: B6Ng01-193K02.g_65_1087

seq1  GAATTCAGTCATCACAGGACTGTGCCGTAGGGGAGTCAGTCATCAAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCATCACAGGACTGTGCCGTAGGGGAGTCAGTCATCAAAGAA  50

seq1  CTGGCAGTTGGGCATCAGTCATCACATGACTGTGCAGTTTGGGAGTCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGTTGGGCATCAGTCATCACATGACTGTGCAGTTTGGGAGTCTAT  100

seq1  AATCAAGGACTGTGCATTTTGGGAGTCAGTAATTACAGGACTGTGCAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAGGACTGTGCATTTTGGGAGTCAGTAATTACAGGACTGTGCAGTT  150

seq1  GGGCATTCAACATCACAGGAATGTGCAGGTGGGCAGTCAGTCATCACAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATTCAACATCACAGGAATGTGCAGGTGGGCAGTCAGTCATCACAGG  200

seq1  ACTGTGCAGTTGTGCAGTCAGTCATCACAGGACTGTGCAGTTGGGTAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCAGTTGTGCAGTCAGTCATCACAGGACTGTGCAGTTGGGTAGTA  250

seq1  ATCAAGGAACTGTGCATTTGGGCAGTCACTCATCACAGGACTGTGCAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGAACTGTGCATTTGGGCAGTCACTCATCACAGGACTGTGCAGTT  300

seq1  GGGAAATCAGTTATCACAGGACTGTGCAGTTGGGCAGTCAGTTATCACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATCAGTTATCACAGGACTGTGCAGTTGGGCAGTCAGTTATCACAA  350

seq1  GACTGTGCAGTTGGTAAGTCAGTCATCACCGGACTGTGCAGTTGGGGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGCAGTTGGTAAGTCAGTCATCACCGGACTGTGCAGTTGGGGAGT  400

seq1  CAGTCATCACAGGACTGTGAAGTTAGGCAATCTGTCATCACAAGACTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATCACAGGACTGTGAAGTTAGGCAATCTGTCATCACAAGACTTTC  450

seq1  CAGTAGGGTAGTCAGTCATCACAGGACTCTGCAGTTGGAGAGTCTGTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGGGTAGTCAGTCATCACAGGACTCTGCAGTTGGAGAGTCTGTCAT  500

seq1  CACAGGACTGTGCAGTTGAGCAGTCAGTCATCACAATGCTGTGCAGTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGACTGTGCAGTTGAGCAGTCAGTCATCACAATGCTGTGCAGTTTG  550

seq1  GGCTGTCAATCATCATATGACTGTGTAGTTGGGCAATCAGTTATCACAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTCAATCATCATATGACTGTGTAGTTGGGCAATCAGTTATCACAGT  600

seq1  ACTGTGCAGTTGAGCAGTCAGTCATCACAGGACTGTGCAGTAGGGCATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCAGTTGAGCAGTCAGTCATCACAGGACTGTGCAGTAGGGCATCA  650

seq1  GTCATCACAGGACTGTGCAGTAGGGTAGTCATCACAGGAC-TTTAGGTTG  699
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GTCATCACAGGACTGTGCAGTAGGGTAGTCATCACAGGACTTTTAGGTTG  700

seq1  GGCAGTCAACATCACAGGAATGTGCAGTTGGGCAGTCAGTAATCACAGGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTCAACATCACAGGAATGTGCAGTTGGGCAGTCAGTAATCACAGGA  750

seq1  CTGTACAGTTTGGCAGTCAGTCATTACAGGACTCTGC-AGTTCGGTAGTC  798
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTGTACAGTTTGGCAGTCAGTCATTACAGGACTCTGCAAGTTCGGTAGTC  800

seq1  ATCACAAGACTGTGCAGTTGGGCAATCAGTCATCACAAGACTGTCCAATT  848
      ||||| |||||||||||||||||||||||||||||||||||||| |||||
seq2  ATCACCAGACTGTGCAGTTGGGCAATCAGTCATCACAAGACTGT-CAATT  849

seq1  GGGTAGTCAGTCATCACAGGACTGTGCCATTTGGCAGTCAGTCA-TCACA  897
      |||||||||||||||||||||||||||||||||||||||||| | |||||
seq2  GGGTAGTCAGTCATCACAGGACTGTGCCATTTGGCAGTCAGTTATTCACA  899

seq1  GG-CCTGTG-CAGTTGGGCAGTCAG-TCATCACAGGACTGTGC-AGTTGG  943
      || |||||| |||||||||| | || ||||||||| ||||||| ||||||
seq2  GGTCCTGTGCCAGTTGGGCAATTAGTTCATCACAGAACTGTGCAAGTTGG  949

seq1  GTAGTC-AGTCATCACA--GGACTGTGCATTTTGGCAGTCAGTCATCACA  990
      |||||| ||||||||||  | |||||||||||||||||||||||| ||||
seq2  GTAGTCAAGTCATCACAAGGAACTGTGCATTTTGGCAGTCAGTCAACACA  999

seq1  GGCCTGT-GCATTTGGGTTGTCCG  1013
      ||||||| ||||| || | |||||
seq2  GGCCTGTGGCATTGGGTTGGTCCG  1023


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