BAC Information

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BAC

Clone NameB6Ng01-193O05
Chromosome9 (Build37)
Map Location 94,305,329 - 94,306,007
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC674371, LOC384967
Downstream geneEG384968, 1190002N15Rik, EG667601, Slc9a9, Chst2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193O05.bB6Ng01-193O05.g
ACCGA016730GA016731
length1,166680
definitionB6Ng01-193O05.b B6Ng01-193O05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctaaggaataccgaatggcagagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcaaaatggctaagatcaaaaattcaggtgacag
cagatgctggcgtggatgtggagaaagaggaacactcctccattgttggg
gggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattggacatagtactactggaggatccagcaatacctctcctggg
catatatccagaagatgccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggagtaccactcagctattaaaaagaatgaatttatgaaattcctagcca
aatgaatggacctggagggcatcatcctgagtgaggtaacacattcacaa
aggaactcacacaatatgtactcactgataagtggatattagcccaaaac
ctaggatacccaagatataagatacaatttcctaaacacatgaaactcaa
gaaaaatgaagactgaagtgtggacactatgcccctccttagaagtggga
acaaaacacccttggaaggagttacagagacaaagtttgatgctgagatg
aaaggatggtccatgtagagacttccatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaggattttattgaa
aggacccagatgtagctttctcttgtgagactatgccggggcctagcaaa
cacagaagttggatgctcacagtcagctaatggatggatcacaggactcc
caatgagagctagagaaagtagccaggagctaaagggatcttcaacctat
taggctgacaaacttatgactaccagtacccgagctcttgactcgagctg
catatgtatcaaagattgcctagtcggcatcactggaaagaaagccatga
catgccaactttaattgccagttacaggaatcgcaggccaacgtccagtt
gttccgtttagcagaa

gaattcagtatgcacactccatagttctctttgagaatatttgcaagtgt
taattgcaaaatcttacatggagactttagacaaggtttttggtatgatt
tttctatgatagaaacatactatccatgtataatgttaatatttttgtat
ttaaaggtgtttgtattaagcagactggatgcttcctaaattgtaggtat
ttatgctaattcataatagaaatgcatatttgtaatctaatgttatccac
tctttagttattatatctttggtaatttactaaaccttgttctgtttctc
ctgcttgaacattattccccgaaacagaaacagcaacactagttaaaagt
tacttttcgttcttacaatatctcctaatttgtacatgatgaaacactgc
taatctttttgatagttgaccaggaaaaatggaagccttatcttgtttta
aagaaaaattggccgttaaacacacgagacaaaccatccgtaacataaag
agcacattggccatgagaattaccagtttatttctcacatggacaggctg
cacagcctcacattatgtatgagaatgcatagaagcaatgagaagtttaa
ggctaaatgggaaacaaaatactccctccagttttaatcactaattactg
gtctcctctcctctcctctcctctcctctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_94305329_94306007
seq2: B6Ng01-193O05.g_64_742 (reverse)

seq1  AGAGGAGAGGAGAGGAGAGGAGAGGAGACCAGTAATTAGTGATTAAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGAGGAGAGGAGAGGAGAGGAGACCAGTAATTAGTGATTAAAACT  50

seq1  GGAGGGAGTATTTTGTTTCCCATTTAGCCTTAAACTTCTCATTGCTTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAGTATTTTGTTTCCCATTTAGCCTTAAACTTCTCATTGCTTCTA  100

seq1  TGCATTCTCATACATAATGTGAGGCTGTGCAGCCTGTCCATGTGAGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCTCATACATAATGTGAGGCTGTGCAGCCTGTCCATGTGAGAAAT  150

seq1  AAACTGGTAATTCTCATGGCCAATGTGCTCTTTATGTTACGGATGGTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGTAATTCTCATGGCCAATGTGCTCTTTATGTTACGGATGGTTTG  200

seq1  TCTCGTGTGTTTAACGGCCAATTTTTCTTTAAAACAAGATAAGGCTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGTGTGTTTAACGGCCAATTTTTCTTTAAAACAAGATAAGGCTTCCA  250

seq1  TTTTTCCTGGTCAACTATCAAAAAGATTAGCAGTGTTTCATCATGTACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTGGTCAACTATCAAAAAGATTAGCAGTGTTTCATCATGTACAA  300

seq1  ATTAGGAGATATTGTAAGAACGAAAAGTAACTTTTAACTAGTGTTGCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGAGATATTGTAAGAACGAAAAGTAACTTTTAACTAGTGTTGCTGT  350

seq1  TTCTGTTTCGGGGAATAATGTTCAAGCAGGAGAAACAGAACAAGGTTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTCGGGGAATAATGTTCAAGCAGGAGAAACAGAACAAGGTTTAG  400

seq1  TAAATTACCAAAGATATAATAACTAAAGAGTGGATAACATTAGATTACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTACCAAAGATATAATAACTAAAGAGTGGATAACATTAGATTACAA  450

seq1  ATATGCATTTCTATTATGAATTAGCATAAATACCTACAATTTAGGAAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCATTTCTATTATGAATTAGCATAAATACCTACAATTTAGGAAGCA  500

seq1  TCCAGTCTGCTTAATACAAACACCTTTAAATACAAAAATATTAACATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCTGCTTAATACAAACACCTTTAAATACAAAAATATTAACATTAT  550

seq1  ACATGGATAGTATGTTTCTATCATAGAAAAATCATACCAAAAACCTTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGATAGTATGTTTCTATCATAGAAAAATCATACCAAAAACCTTGTC  600

seq1  TAAAGTCTCCATGTAAGATTTTGCAATTAACACTTGCAAATATTCTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTCTCCATGTAAGATTTTGCAATTAACACTTGCAAATATTCTCAAA  650

seq1  GAGAACTATGGAGTGTGCATACTGAATTC  679
      |||||||||||||||||||||||||||||
seq2  GAGAACTATGGAGTGTGCATACTGAATTC  679


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