MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-195N11
Chromosome	9 (Build37)
Map Location	33,920,572 - 33,921,530
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100042343
Downstream gene	Kirrel3, St3gal4
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042343 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042343
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 mRNAs, 476 ESTs, 8 Proteins

name	Kirrel3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67703 MGI:1914953
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	St3gal4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20443 MGI:1316743
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042343 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259895 GeneID:100042343
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 mRNAs, 476 ESTs, 8 Proteins product : similar to transmembrane protein transcript_id : XM_001478013.1

name	Kirrel3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892291 GeneID:67703 MGI:1914953
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kin of IRRE like 3 (Drosophila) transcript_id : NM_026324.2

name	St3gal4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361976 GeneID:20443 MGI:1316743
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ST3 beta-galactoside alpha-2,3-sialyltransferase 4 transcript_id : NM_009178.3

name	LOC100042343 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259896 GeneID:100042343
definition	codon_start : 1 product : similar to transmembrane protein protein_id : XP_001478063.1

name	Kirrel3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29824425 GeneID:67703 MGI:1914953
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA] [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0030165 - PDZ domain binding [Evidence NAS]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0030097 - hemopoiesis [Evidence IDA] codon_start : 1 note : X kin of IRRE like 3 product : membrane protein mKirre protein_id : NP_080600.1

name	St3gal4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543703 CCDS:CCDS22956.1 GeneID:20443 MGI:1316743
definition	GO_component : GO:0030173 - integral to Golgi membrane [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 note : sialyltransferase 4c; ST3Gal IV; sialyltransferase 4C (beta-galactosidase alpha-2,3-sialytransferase); sialyltransferase 4C (beta-galactoside alpha-2,3-sialytransferase) product : ST3 beta-galactoside alpha-2,3-sialyltransferase 4 protein_id : NP_033204.2

clone name	MSMg01-110K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354F09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-433L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148P03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-148P05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-323P09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-215C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133E08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-135G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080N23
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-195N11.b	B6Ng01-195N11.g
ACC	GA018147	GA018148
length	1,117	962
definition	B6Ng01-195N11.b	B6Ng01-195N11.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcatatgtggggctgcattgcaatatacagaaaaaaaatcctgttt cctttcggtcattcactgcctttggctcttatgaagtcccctctttcaca attccctgagtctcggggaatggagatgtgataccaatgtcttattttag gctgagcatcttgaagtctttgaccagtgtgggtctctctctgccttaat tgccatccactataaatggaagcttctctggagaaggtttagagatgtac acatttatgggtgtaacagtaagtcattaggaattggtttaattccacca aatacttgttgtagttccttccttagggctcatgacttcttagaaccgca ggttgtaggctcccataactggtggcagcaacgttttccacttaaggaat agttcttaaattcaatcagcaaataggaacacctatgatatttgtgctac gatttcaccagtggtcatttcttgccagggtaatcatggttgaggcttgc agagtagtcatggtggtaacttttctactccagtagcgtgtatagtacct tccaccaccacaaagccagccagtagtgatgaagctcccaggtgagtacc agcttgatattccctatgactcaagagtgtgttatcttcagcaatgttgt cttaccctcaagttccagagggtggcaaagaatattggcaatagcctata atgtttatgggtctgtaggacttcacatgtccacaactcaagaagatgta actcatttctgcctctgggttttgtatttgttagtctgttataactgata agtgcattattgcctcattacaggataactccatttaaattcttttactc tatatgaatgtatgtattttaagatgcttctatagtagttggttttccat atgaattttcaaagtattaccagtttcagtttctcccattgtattcatgc cttctttcttgcctccccacactggtccttcaacatttacctttctgtac cattatgccttaaatcctttatacactggtttctaatctccctcccattg aatttcccatgcctactgatattctgacttaatagaaatttccaaggagg atataatattctcaacg	gaattccaggtagtgtatctgcctggtttttcttaagggaaataaaaaga atttaaaatatggtcagaataattgaggctcagtgatggagacttttgag gccattagttgctgggtaggattggacctggcactgtaaggtgagtttgg ccaggacaggttgaatttggagcataagttaaatgaaaatccaaccagaa acctccaactgatgtcagagtgtagaatatctgacgtccaaaaatgaagt gttaatagctgaaagcatcaacaaaatggatggagaagacaccttggaca cgggttggacaaggccttaaacaggaagacaaatggggaaagttcactag aaagctaagcgagaaaccatattgaacactgaaggatggtggtggctttc tcttcacatagtagaattcatgggtgtcagatttcaggtggatgaaacaa aatgggaggtaacaaagcaaagctacaaattgaggaacatttaggagatt caaacatcaagtataaaaagctttacagaaccacatcacattctcaaaag aatcacacagtgtcagccaagagctgaattacatagagaattgccccatt tcttcatagagcaaatctgtacataggttaggaagaaagctcagttggta agatgcttatctcaacagcatagtgaatctgagttccatccacagaacag aacagatgacaaagacaggagggggtgaggagtatcccatacttttcatt gcagaactggagaggcagagaatggacatagctggggacaggttgacccc gaggctaccctaacctacttagaaaactccaagccatcaagagaccctcc gctcaagggaaacattgaaataacagtaaaggaatgaaaagaaacagcac tcaaagttgtcctctggtcttcactctctctctctctctctctctctctc tctctctctctc
quality values	Open. Hide. 47 31 26 34 58 21 17 62 62 47 47 47 62 62 62 49 62 62 54 62 51 49 62 62 54 56 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 59 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 54 62 59 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 56 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 56 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 52 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 42 62 62 62 62 62 62 62 52 62 53 52 62 52 62 62 62 58 58 58 52 58 58 54 54 58 58 58 58 58 58 58 58 54 58 58 58 54 58 54 58 58 54 52 54 54 58 54 54 58 54 58 42 58 54 58 58 58 54 48 54 58 58 54 58 43 54 58 42 58 58 54 58 58 54 58 54 58 54 58 58 58 49 58 58 45 42 58 58 58 52 58 54 53 58 52 49 48 47 48 58 58 37 58 41 38 58 51 49 54 58 50 58 51 50 40 41 58 50 58 58 49 53 52 58 51 39 53 50 50 54 52 58 32 46 46 30 49 51 39 52 39 58 58 52 41 52 40 52 58 51 50 58 39 53 58 40 52 51 52 53 40 58 58 54 53 41 39 49 58 50 53 51 52 37 54 18 43 43 40 51 58 39 58 58 58 50 58 50 37 39 26 54 54 51 33 50 53 49 41 30 34 51 50 51 52 49 51 50 44 15 58 30 50 53 58 49 39 41 53 45 54 37 52 30 44 39 23 51 33 37 34 52 39 38 54 39 42 46 37 45 32 46 37 53 45 39 39 33 34 32 30 39 32 53 37 33 39 42 53 40 37 47 54 39 52 42 52 33 39 41 45 42 41 44 54 35 54 54 41 54 29 40 32 54 42 52 45 31 34 31 32 32 31 53 28 41 33 33 29 39 40 37 53 52 32 52 45 21 33 40 32 37 42 53 35 23 12 39 18 27 33 31 31 21 27 31 31 38 39 38 30 28 31 36 38 42 33 36 21 41 46 31 28 51 13 24 34 46 31 46 46 23 31 31 31 42 26 30 27 38 32 32 31 31 34 48 18 38 33 46 30 42 32 46 46 35 27 24 24 43 24 36 37 38 26 39 14 31 25 27 22 26 37 18 18 11 9 7 5 39 31 31 31 25 14 23 14 27 32 44 32 36 41 41 43 26 29 41 17 16 31 34 30 31 32 19 30 23 22 24 44 26 17 6 17 7 41 14 21 23 30 36 22 32 14 18 25 6 19 34 31 12 10 18 30 14 22 13 7 10 17 43 25 31 19 12 24 39 43 10 29 43 43 31 24 18 20 18 16 11 14 3 13 7 7 8 11 6 14 6 3 3 17 18 23 18 15 3 34 27 28 9 8 4 5 13 14 28 27 25 19 6 8 9 3 3 19 15 16 15 17 15 21 24 29 18 25 16 7 6 19 14 9 7 5 5 14 6 11 5 6 9 12 15 19 11 17 27 15 13 28 18 4 15 10 10 13 9 18 30 8 16 16 13 13 12 7 5 5 3 5 23 6 19 13 6 4 6 9 10 4 8 7 15 10 8 15 21 16 10 5 5 6 3 4 30 13 19 13 16 9 15 9 22 8 12 3 5 6 9 11 9 4 8 22 6 6 7 5 5 11 7 11	Open. Hide. 62 47 43 37 62 62 39 23 62 62 62 62 56 56 49 62 56 54 62 62 59 62 62 62 62 62 62 62 62 62 49 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 62 62 59 59 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 37 35 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 54 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 54 58 58 58 54 54 52 58 58 52 54 41 58 54 58 58 58 58 54 58 58 58 58 58 58 54 58 52 58 58 58 58 58 58 58 58 58 52 54 49 58 58 53 51 58 50 58 58 58 58 58 49 50 58 58 58 58 58 50 58 58 58 50 58 51 49 58 50 58 58 58 51 51 53 58 58 58 53 47 51 46 49 58 53 58 46 58 58 58 58 52 53 58 42 53 52 58 51 51 58 51 58 50 46 58 58 50 58 58 48 43 58 58 58 51 50 58 51 34 53 52 50 58 42 49 44 58 49 52 51 58 58 50 40 50 50 58 50 33 58 51 50 50 32 54 51 58 52 49 36 54 45 52 53 45 53 40 51 54 44 44 40 51 51 40 47 28 51 50 54 54 51 53 54 54 39 21 40 53 33 49 53 40 53 53 35 53 49 49 45 40 42 51 45 54 32 54 51 29 45 31 45 53 54 38 52 40 39 36 41 37 35 37 54 34 40 31 45 34 30 53 41 32 29 47 52 32 33 32 31 52 51 41 19 49 49 49 46 32 46 37 29 53 35 33 45 34 40 43 53 47 31 42 31 35 43 51 46 31 38 33 31 33 30 41 31 21 51 31 30 30 40 36 32 30 31 16 41 32 31 31 46 12 51 29 29 33 27 17 31 33 42 31 31 34 38 46 46 41 46 28 26 22 12 46 28 31 31 32 12 40 40 38 16 42 29 43 29 27 24 31 46 30 31 19 31 32 30 23 31 31 28 23 32 31 42 46 46 27 32 43 31 34 15 22 30 32 38 32 37 32 23 32 38 39 22 32 20 41 28 25 13 31 23 19 31 31 21 14 14 33 31 14 44 9 25 20 29 31 31 28 44 25 18 14 18 29 22 27 30 16 44 16 22 25 25 9 14 24 18 47 47 27 19 35 32 31 29 23 31 34 21 32 30 24 18 48 30 32 14 14 24 21 22 25 11 14 14 28 31 22 27 26 48 9 28 7 34 15 25 10 37 15 30 8 16 5 16 10 21 13 10 5 24 13 39 23 31 12 20 19 18 7 5 12 28 11 22 9 21 7 11 4 8 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_33920572_33921530
seq2: B6Ng01-195N11.g_66_1027

seq1  GAATTCCAGGTAGTGTATCTGCCTGGTTTTTCTTAAGGGAAATAAAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTAGTGTATCTGCCTGGTTTTTCTTAAGGGAAATAAAAAGA  50

seq1  ATTTAAAATATGGTCAGAATAATTGAGGCTCAGTGATGGAGACTTTTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAATATGGTCAGAATAATTGAGGCTCAGTGATGGAGACTTTTGAG  100

seq1  GCCATTAGTTGCTGGGTAGGATTGGACCTGGCACTGTAAGGTGAGTTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTAGTTGCTGGGTAGGATTGGACCTGGCACTGTAAGGTGAGTTTGG  150

seq1  CCAGGACAGGTTGAATTTGGAGCATAAGTTAAATGAAAATCCAACCAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACAGGTTGAATTTGGAGCATAAGTTAAATGAAAATCCAACCAGAA  200

seq1  ACCTCCAACTGATGTCAGAGTGTAGAATATCTGACGTCCAAAAATGAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCAACTGATGTCAGAGTGTAGAATATCTGACGTCCAAAAATGAAGT  250

seq1  GTTAATAGCTGAAAGCATCAACAAAATGGATGGAGAAGACACCTTGGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATAGCTGAAAGCATCAACAAAATGGATGGAGAAGACACCTTGGACA  300

seq1  CGGGTTGGACAAGGCCTTAAACAGGAAGACAAATGGGGAAAGTTCACTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTTGGACAAGGCCTTAAACAGGAAGACAAATGGGGAAAGTTCACTAG  350

seq1  AAAGCTAAGCGAGAAACCATATTGAACACTGAAGGATGGTGGTGGCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTAAGCGAGAAACCATATTGAACACTGAAGGATGGTGGTGGCTTTC  400

seq1  TCTTCACATAGTAGAATTCATGGGTGTCAGATTTCAGGTGGATGAAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACATAGTAGAATTCATGGGTGTCAGATTTCAGGTGGATGAAACAA  450

seq1  AATGGGAGGTAACAAAGCAAAGCTACAAATTGAGGAACATTTAGGAGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGAGGTAACAAAGCAAAGCTACAAATTGAGGAACATTTAGGAGATT  500

seq1  CAAACATCAAGTATAAAAAGCTTTACAGAACCACATCACATTCTCAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATCAAGTATAAAAAGCTTTACAGAACCACATCACATTCTCAAAAG  550

seq1  AATCACACAGTGTCAGCCAAGAGCTGAATTACATAGAGAATTGCCCCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACACAGTGTCAGCCAAGAGCTGAATTACATAGAGAATTGCCCCATT  600

seq1  TCTTCATAGAGCAAATCTGTACATAGGTTAGGAAGAAAGCTCAGTTGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATAGAGCAAATCTGTACATAGGTTAGGAAGAAAGCTCAGTTGGTA  650

seq1  AGATGCTTATCTCAACAGCATAGTGAATCTGAGTTCCATCCACAGAACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTTATCTCAACAGCATAGTGAATCTGAGTTCCATCCACAGAACAG  700

seq1  AACAGATGACAAAGACAGGAGGGGGTGAGGAGTATCCCATACTTTTCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATGACAAAGACAGGAGGGGGTGAGGAGTATCCCATACTTTTCATT  750

seq1  GCAGAACTGGAGAGGCAGAGAATGGACATAGCTGGGGACAGGTTGACCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAACTGGAGAGGCAGAGAATGGACATAGCTGGGGACAGGTTGACCCC  800

seq1  GAGGCTACCCTAACCTACTTAGAAAACTCCAAGCCATCAAGAGACCCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTACCCTAACCTACTTAGAAAACTCCAAGCCATCAAGAGACCCTCC  850

seq1  GCTCAAGGG-AACATTGAAATAACAGT-AAGGAATG-AAAGAAACAGCAC  897
      ||||||||| ||||||||||||||||| |||||||| |||||||||||||
seq2  GCTCAAGGGAAACATTGAAATAACAGTAAAGGAATGAAAAGAAACAGCAC  900

seq1  TCAAAGTTGTCCTCTGGTCTTCACTCTCTCTCTCTCTCTCTCTCTCTCTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGTTGTCCTCTGGTCTTCACTCTCTCTCTCTCTCTCTCTCTCTCTC  950

seq1  TCTCTCTCTCTC  959
      ||||||||||||
seq2  TCTCTCTCTCTC  962

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information