BAC Information

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BAC

Clone NameB6Ng01-196L14
Chromosome9 (Build37)
Map Location 120,291,293 - 120,491,926
singlet/doubletdoublet
Overlap geneMyrip, Eif1b, LOC638068, Entpd3, Rpl14, 5830454E08Rik
Upstream geneXylb, Acvr2b, Endogl1, Scn5a, Scn10a, Scn11a, LOC100039837, Wdr48, Gorasp1, Ttc21a, Axud1, Cmya1, Cx3cr1, Ccr8, Slc25a38, Rpsa, Snora62, EG546166, Mobp, LOC100039898, LOC666044
Downstream geneLOC100040010, Ctnnb1, Ulk4, Trak1, Cck, Lyzl4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196L14.bB6Ng01-196L14.g
ACCGA018785GA018786
length700896
definitionB6Ng01-196L14.b B6Ng01-196L14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,491,228 - 120,491,926)(120,291,293 - 120,292,176)
sequence
gaattcattaatgtgtgttcacgtggtgccacctactggtgagaaggagc
tcgaggaagtgctaagctaaagctgcagggggaaggccgagaagaactga
caaccgtgaaagtcttcactgtgggagcacggccctgggagacacacgcg
ctaactgggcagatgaagagggtatttcaaatgcagcccaggaaccaacc
agcacagctggaggaaaggggggaagaggcacagctgcaggaggggctcg
cggctcctgcagaggaatctgagctgaggtggagggagtccctggggatc
accctgagtcagctccatctccaccaggtacagtttgaggtgctggagaa
aactcctgtaccatctgaaagctctccggcacttcttgcattcacacagc
ttctccgcagagtgaacaatctggtgctggaggaaggccacgcccctccg
gaaggccctaaggctctccttgcagacgtagggcttctctctggtgtcta
tcatccagtcctgggttaaggccccgctagaactcagatctttcctgcac
tgcctgcacttgtaggtgatccttccagtcgtggctggacctgaaggctt
tgcggcaccctttacattcgaaggactttttctcccaatgtgactcatct
ggttacgcagcagcatcgagttgtagctgagcctccccccccccccgcac

gaattcatcctaaaacccgtctgtgcttagttgtttacggtcatgtacca
cgtagcatttcagtgggtaacaggccgcacatacagcccataacgttaca
atggagccaagaagtccccacggcctggagacatcatagtcctcactagg
agagttccactaggaagttgtgaggcttctctcagctccgaccctgtggg
cacccagagccatcagagaaagtcttctcgccagcctcccctctcccccc
tgtaggatatatttttaaatgttctataggggctggcgtaaagtaagcgt
aagtccttgatccctagcatacacttaagaagtatggtaacccatgcttc
atctcaggctgggaggcggaggcagggggatcctagggctcacttgccat
gcagtgcagctgagcagtgaactctaggtccctgaagaggcaccgtggag
agcaatgaagctcgacacccagtgttgacttctggtctccacaggcgcaa
acacatgtatgcaccacacacacaaatgtaaaaccaaccaaccactgtgc
aggtttctctacagctccctcccatgaacttagacttggggaagatgtct
gctgtgaacagggctgttgaggatggaccaccaagctgccacccctagtg
ccgcatgccatctcctcacagctgacaggcgtctctacaggcacccccct
ctcacagatgaatcagatgcgcctctgattaggtgggagtttcacattca
tggcagtgaatgacacagcggatgttcaaggtagtgcactctgaggagca
acgcttttgaggtggacgtcgtgcccacccttggtggggggagagaacag
agcttctgtgcatctctgttttgttttactgtcaatctgccagagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_120491228_120491926
seq2: B6Ng01-196L14.b_47_746 (reverse)

seq1  GTGC-GGGGGGGGGGGAGGCTCAGCTACAACTCGATGCTGCTGCGTAACC  49
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGGGGGGGGGGGGAGGCTCAGCTACAACTCGATGCTGCTGCGTAACC  50

seq1  AGATGAGTCACATTGGGAGAAAAAGTCCTTCGAATGTAAAGGGTGCCGCA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGTCACATTGGGAGAAAAAGTCCTTCGAATGTAAAGGGTGCCGCA  100

seq1  AAGCCTTCAGGTCCAGCCACGACTGGAAGGATCACCTACAAGTGCAGGCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTCAGGTCCAGCCACGACTGGAAGGATCACCTACAAGTGCAGGCA  150

seq1  GTGCAGGAAAGATCTGAGTTCTAGCGGGGCCTTAACCCAGGACTGGATGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGGAAAGATCTGAGTTCTAGCGGGGCCTTAACCCAGGACTGGATGA  200

seq1  TAGACACCAGAGAGAAGCCCTACGTCTGCAAGGAGAGCCTTAGGGCCTTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACCAGAGAGAAGCCCTACGTCTGCAAGGAGAGCCTTAGGGCCTTC  250

seq1  CGGAGGGGCGTGGCCTTCCTCCAGCACCAGATTGTTCACTCTGCGGAGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGGGGCGTGGCCTTCCTCCAGCACCAGATTGTTCACTCTGCGGAGAA  300

seq1  GCTGTGTGAATGCAAGAAGTGCCGGAGAGCTTTCAGATGGTACAGGAGTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTGAATGCAAGAAGTGCCGGAGAGCTTTCAGATGGTACAGGAGTT  350

seq1  TTCTCCAGCACCTCAAACTGTACCTGGTGGAGATGGAGCTGACTCAGGGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAGCACCTCAAACTGTACCTGGTGGAGATGGAGCTGACTCAGGGT  400

seq1  GATCCCCAGGGACTCCCTCCACCTCAGCTCAGATTCCTCTGCAGGAGCCG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCCAGGGACTCCCTCCACCTCAGCTCAGATTCCTCTGCAGGAGCCG  450

seq1  CGAGCCCCTCCTGCAGCTGTGCCTCTTCCCCCCTTTCCTCCAGCTGTGCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCCCCTCCTGCAGCTGTGCCTCTTCCCCCCTTTCCTCCAGCTGTGCT  500

seq1  GGTTGGTTCCTGGGCTGCATTTGAAATACCCTCTTCATCTGCCCAGTTAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTTCCTGGGCTGCATTTGAAATACCCTCTTCATCTGCCCAGTTAG  550

seq1  CGCGTGTGTCTCCCAGGGCCGTGCTCCCACAGTGAAGACTTTCACGGTTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGTGTGTCTCCCAGGGCCGTGCTCCCACAGTGAAGACTTTCACGGTTG  600

seq1  TCAGTTCTTCTCGGCCTTCCCCCTGCAGCTTTAGCTTAGCACTTCCTCGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCTTCTCGGCCTTCCCCCTGCAGCTTTAGCTTAGCACTTCCTCGA  650

seq1  GCTCCTTCTCACCAGTAGGTGGCACCACGTGAACACACATTAATGAATTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTCTCACCAGTAGGTGGCACCACGTGAACACACATTAATGAATTC  700

seq1: chr9_120291293_120292176
seq2: B6Ng01-196L14.g_66_961

seq1  GAATTCATCCTAAAACCCGTCTGTGCTTAGTTGTTTACGGTCATGTACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCTAAAACCCGTCTGTGCTTAGTTGTTTACGGTCATGTACCA  50

seq1  CGTAGCATTTCAGTGGGTAACAGGCCGCACATACAGCCCATAACGTTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGCATTTCAGTGGGTAACAGGCCGCACATACAGCCCATAACGTTACA  100

seq1  ATGGAGCCAAGAAGTCCCCACGGCCTGGAGACATCATAGTCCTCACTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGCCAAGAAGTCCCCACGGCCTGGAGACATCATAGTCCTCACTAGG  150

seq1  AGAGTTCCACTAGGAAGTTGTGAGGCTTCTCTCAGCTCCGACCCTGTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTCCACTAGGAAGTTGTGAGGCTTCTCTCAGCTCCGACCCTGTGGG  200

seq1  CACCCAGAGCCATCAGAGAAAGTCTTCTCGCCAGCCTCCCCTCTCCCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAGAGCCATCAGAGAAAGTCTTCTCGCCAGCCTCCCCTCTCCCCCC  250

seq1  TGTAGGATATATTTTTAAATGTTCTATAGGGGCTGGCGTAAAGTAAGCGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGATATATTTTTAAATGTTCTATAGGGGCTGGCGTAAAGTAAGCGT  300

seq1  AAGTCCTTGATCCCTAGCATACACTTAAGAAGTATGGTAACCCATGCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCTTGATCCCTAGCATACACTTAAGAAGTATGGTAACCCATGCTTC  350

seq1  ATCTCAGGCTGGGAGGCGGAGGCAGGGGGATCCTAGGGCTCACTTGCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGGCTGGGAGGCGGAGGCAGGGGGATCCTAGGGCTCACTTGCCAT  400

seq1  GCAGTGCAGCTGAGCAGTGAACTCTAGGTCCCTGAAGAGGCACCGTGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGCAGCTGAGCAGTGAACTCTAGGTCCCTGAAGAGGCACCGTGGAG  450

seq1  AGCAATGAAGCTCGACACCCAGTGTTGACTTCTGGTCTCCACAGGCGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGAAGCTCGACACCCAGTGTTGACTTCTGGTCTCCACAGGCGCAA  500

seq1  ACACATGTATGCACCACACACACAAATGTAAAACCAACCAACCACTGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGTATGCACCACACACACAAATGTAAAACCAACCAACCACTGTGC  550

seq1  AGGTTTCTCTACAGCTCCCT-CCATGAACTTAGACTTGGGGAAGATGTCT  599
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGGTTTCTCTACAGCTCCCTCCCATGAACTTAGACTTGGGGAAGATGTCT  600

seq1  GCTGTGAACAGGGCTGTTGAGGATGGACCACCAAGCTGCCACCCCTAGTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGAACAGGGCTGTTGAGGATGGACCACCAAGCTGCCACCCCTAGTG  650

seq1  CCGCATGCCATCTCCTCACAGCTGACAGGCGTCTCTACAGGCACCCCCCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCATGCCATCTCCTCACAGCTGACAGGCGTCTCTACAGGCACCCCCCT  700

seq1  CTCACAGATGAATCAGATGCGCCTCTGATTAGGTGGGAG-TTCACATTCA  748
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTCACAGATGAATCAGATGCGCCTCTGATTAGGTGGGAGTTTCACATTCA  750

seq1  TGGCAGTGAATGACACAGCGGATGT--CAGGGAGTGCAC-CTGAGGAGCA  795
      |||||||||||||||||||||||||   ||| ||||||| ||||||||||
seq2  TGGCAGTGAATGACACAGCGGATGTTCAAGGTAGTGCACTCTGAGGAGCA  800

seq1  ACGC-TTTGAGGTGGACGTCGTGCCCA-CCTTGGT-GGGGGAGAGAACAG  842
      |||| |||||||||||||||||||||| ||||||| ||||||||||||||
seq2  ACGCTTTTGAGGTGGACGTCGTGCCCACCCTTGGTGGGGGGAGAGAACAG  850

seq1  AGC-TCTGTGCATCTCTGTTTTG-TTTACTGTC-ATCTG-CAGAGT  884
      ||| ||||||||||||||||||| ||||||||| ||||| ||||||
seq2  AGCTTCTGTGCATCTCTGTTTTGTTTTACTGTCAATCTGCCAGAGT  896