BAC Information

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BAC

Clone NameB6Ng01-204B17
Chromosome9 (Build37)
Map Location 4,180,050 - 4,181,143
singlet/doubletsinglet
Overlap genenone
Upstream gene4930433N12Rik, LOC664797, Olfr369-ps1, Alkbh8, Cwf19l2, LOC384911, Gucy1a2, LOC100039236
Downstream geneLOC384912, LOC100039253, Aasdhppt, Kbtbd3, LOC664860, 8430410K20Rik, Gria4, EG664889
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204B17.bB6Ng01-204B17.g
ACCGA024144GA024145
length1,1231,087
definitionB6Ng01-204B17.b B6Ng01-204B17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagctcaatgccggcttcaaggattttctaggaaccattggaa
cactggtggaggcttagctatgtcaaaaatcaatccttaaaggcacttat
aatgaaacaatactgaaagagagcatacaacagattattgcagggacagg
gtttgagtatacaggatatggaaatgtcaaggttccaggaggcaaagctt
ccttgaaactcttcacctcgtgcctggtttcaggcctttaggcctacaaa
gcagactacactggagtggacgtagcatgtgagcaccagaggaatttatt
ttctggtccaatctatttggagttctgtaggattcttgtatgttcatggg
catgactttctttaggttagggaagttttcttctataatttcattgcaga
tatttactatccctttaagttgggaatcttcactctcttctatacctatt
atccttaggtttggtcttcttattgtgccctggatttcctgtatgttttg
tgttatcagccttttgcattttgcatattctttcactgttgtgtcaatgt
tttctatggtatcttccgcacctgagcttctctcttctatctcttctatt
ctgttggtgatgctcgcatctatgactcctgatctctttcctaggtcttc
tatctccagtgctctcaccctttatgatttctttattgtctctgtttcca
tttttagatcctggatgcttttcttcagttccttcacctgtttgattatg
ttgtcctgtaattcttttaagggattttttgtttcctctttaaggtcttc
taccagttttgcttgtgttctctttgtattttcatcctacttaatgttcc
tctatcatcacaatgagatgcgatttttcatcagtcttgcttttctggtg
ttttggggtaaccaggtcctcattgtggtgaggaaaaacttcggttctga
tgatgccaagtagcttgggttcctgttggctttatgttctgtgctttgcc
tttgccatctggaatatctcaggtgtttagcttaccttcccttgctgtct
ctgactgtagactttcctctgtctgcaacctgtgtgtgtcctgtacttct
tgggagagacccagtttctctct
gaattctattgttaatgtagtttgaagttagatgttgttggtttcagatt
tattttacctccttgtcaaactgccagactttgcatactgagaccccgat
tttcagatactttcatatgactaagaaggtaaactgtttgaataatctag
aaacctcagcaatgtttggaaatagttttgaaaaatttatgtgttctttg
taaacccataggaaagaaataatattaacagaacttagcaagcttagact
atatttagagaactcttagatttctttttactcttctaaacaaatattta
agaagcaaaataaggtacaggcagatttttgtttgttttgatttgtttta
gattattcgtagattagtcaaagcactgttcagttatgtgaaactttatt
caagtcaaaaccacctaaacaagagactagattcaatattaaaggtattt
cccagcagctaaagaagtcttttttataatatagcttcaactgttttttg
ctaatactgtagaagcaagttattcagataatactgtgcaaaagttaccc
atactgccaggttatttctgccatcatcttctcttggatgcttgggatcc
tttcaagtagatttccaacagatcaaagcctgtttgatctgtggaaggac
actgtggtgagactacatggtagcccaaagcaaaacaagacaggaaagga
tcaaggagaaggacacaatccaaccatgcaaatgccctccagtaagccct
acctgaagactccactctcatgatgacacacttgagatcagctttcatgt
atatgctttggcatacatttcatatcacaactaatatacacttcaccttg
tgtgacccatgacttctgaaaaattgatactcctacataaaagggcattt
gttgtgttacatggttgatttaaaaggatcttggtgtctttttacctttt
caaaaaaaaaaaaaaatcactaatgagagtacccttcattatactagtaa
ttcttgcaaaaagatttaatttttaagttttgagtctgcactgtgatgac
atttctctttatttttgctgcatgacaatgaaacagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_4180050_4181143
seq2: B6Ng01-204B17.g_66_1152 (reverse)

seq1  ACTGTTTCATATGTCATGCAGCAAAAAATTAAAGAGAAATGTCATCACAG  50
      |||||||||| ||||||||||||||||  |||||||||||||||||||||
seq2  ACTGTTTCAT-TGTCATGCAGCAAAAA--TAAAGAGAAATGTCATCACAG  47

seq1  TGCAGGACTTCAAAACTTAAAAATTAAATTCTTTTGCAGAATTTACTAGT  100
      |||| ||| ||||||||||||||||||||  |||||||  | ||||||||
seq2  TGCA-GAC-TCAAAACTTAAAAATTAAATCTTTTTGCAAGAATTACTAGT  95

seq1  AT-ATGAAGGGTACTCTCATTAGTGATTTTTTTTTTTTTTTTGGAAAAGG  149
      || ||||||||||||||||||||||||||||||||||||||  |||||||
seq2  ATAATGAAGGGTACTCTCATTAGTGATTTTTTTTTTTTTTT--GAAAAGG  143

seq1  TTAAAAAGACACCAAGATCCTTTTAAATCAACCATGTAACACAACAAATG  199
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TAAAAAGACACCAAGATCCTTTTAAATCAACCATGTAACACAACAAATG  192

seq1  CCCTTTTATGTAGGAGTATCAATTTTTCAGAAGTCATGGGTCACACAAGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTATGTAGGAGTATCAATTTTTCAGAAGTCATGGGTCACACAAGG  242

seq1  TGAAGTGTATATTAGTTGTGATATGAAATGTATGCCAAAGCATATACATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGTATATTAGTTGTGATATGAAATGTATGCCAAAGCATATACATG  292

seq1  AAAGCTGATCTCAAGTGTGTCATCATGAGAGTGGAGTCTTCAGGTAGGGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGATCTCAAGTGTGTCATCATGAGAGTGGAGTCTTCAGGTAGGGC  342

seq1  TTACTGGAGGGCATTTGCATGGTTGGATTGTGTCCTTCTCCTTGATCCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGAGGGCATTTGCATGGTTGGATTGTGTCCTTCTCCTTGATCCTT  392

seq1  TCCTGTCTTGTTTTGCTTTGGGCTACCATGTAGTCTCACCACAGTGTCCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCTTGTTTTGCTTTGGGCTACCATGTAGTCTCACCACAGTGTCCT  442

seq1  TCCACAGATCAAACAGGCTTTGATCTGTTGGAAATCTACTTGAAAGGATC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGATCAAACAGGCTTTGATCTGTTGGAAATCTACTTGAAAGGATC  492

seq1  CCAAGCATCCAAGAGAAGATGATGGCAGAAATAACCTGGCAGTATGGGTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCATCCAAGAGAAGATGATGGCAGAAATAACCTGGCAGTATGGGTA  542

seq1  ACTTTTGCACAGTATTATCTGAATAACTTGCTTCTACAGTATTAGCAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGCACAGTATTATCTGAATAACTTGCTTCTACAGTATTAGCAAAA  592

seq1  AACAGTTGAAGCTATATTATAAAAAAGACTTCTTTAGCTGCTGGGAAATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTGAAGCTATATTATAAAAAAGACTTCTTTAGCTGCTGGGAAATA  642

seq1  CCTTTAATATTGAATCTAGTCTCTTGTTTAGGTGGTTTTGACTTGAATAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAATATTGAATCTAGTCTCTTGTTTAGGTGGTTTTGACTTGAATAA  692

seq1  AGTTTCACATAACTGAACAGTGCTTTGACTAATCTACGAATAATCTAAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCACATAACTGAACAGTGCTTTGACTAATCTACGAATAATCTAAAA  742

seq1  CAAATCAAAACAAACAAAAATCTGCCTGTACCTTATTTTGCTTCTTAAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCAAAACAAACAAAAATCTGCCTGTACCTTATTTTGCTTCTTAAAT  792

seq1  ATTTGTTTAGAAGAGTAAAAAGAAATCTAAGAGTTCTCTAAATATAGTCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTTAGAAGAGTAAAAAGAAATCTAAGAGTTCTCTAAATATAGTCT  842

seq1  AAGCTTGCTAAGTTCTGTTAATATTATTTCTTTCCTATGGGTTTACAAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGCTAAGTTCTGTTAATATTATTTCTTTCCTATGGGTTTACAAAG  892

seq1  AACACATAAATTTTTCAAAACTATTTCCAAACATTGCTGAGGTTTCTAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATAAATTTTTCAAAACTATTTCCAAACATTGCTGAGGTTTCTAGA  942

seq1  TTATTCAAACAGTTTACCTTCTTAGTCATATGAAAGTATCTGAAAATCGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCAAACAGTTTACCTTCTTAGTCATATGAAAGTATCTGAAAATCGG  992

seq1  GGTCTCAGTATGCAAAGTCTGGCAGTTTGACAAGGAGGTAAAATAAATCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCAGTATGCAAAGTCTGGCAGTTTGACAAGGAGGTAAAATAAATCT  1042

seq1  GAAACCAACAACATCTAACTTCAAACTACATTAACAATAGAATTC  1094
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCAACAACATCTAACTTCAAACTACATTAACAATAGAATTC  1087