BAC Information

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BAC

Clone NameB6Ng01-205G19
Chromosome9 (Build37)
Map Location 78,224,339 - 78,225,232
singlet/doubletsinglet
Overlap gene2410146L05Rik
Upstream gene5730403I07Rik, Lrrc1, Klhl31, Gclc, LOC100042212, Elovl5, Gcm1, LOC666353, Fbxo9, Ick, C920006O11Rik, Gsta4, LOC100041074, Gsta1, LOC666367, LOC100042295, LOC666373, LOC100042314, Omt2a, EG666383, Omt2b, Gsta2, Dppa5
Downstream geneLOC666408, LOC100042356, LOC666419, E330016A19Rik, Mto1, Eef1a1, Slc17a5, Cd109, LOC384957, EG666456, LOC436085, LOC235509
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205G19.bB6Ng01-205G19.g
ACCGA025108GA025109
length1,288895
definitionB6Ng01-205G19.b B6Ng01-205G19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaattcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
ggaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcaaccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaattgggctggtgagatggctc
agtgggttagagcacccgactgctcttccgaaggtgcagagttcaaatcc
cagcaaccacatggtggctcacaaccatccgtaacaagatctgaccccct
cttctggagtgtctgaagacagctacaatgtacttacatataataaataa
ataaataaatcttaaaaaaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactaatg
aagactgaagtgtggacactatgctccctccttagaattgggaaaaaaca
cccatggaaggagttacaaagacaaagtttggagctgagatgaaaggatg
gaccatgtagagactgccatatccagggatccaccccataatcagcatcc
aaacgctgacaccattgtgttggagccgcgcccaatttcgccgttacaag
atggcgctgacagctgtgttctagtggaaaacaaatatctgcgcatgtgg
cgagggtggtcttcacctcatgtgctctgccttcctcgtggacgtcaact
cggcccatgggctgcagccaatcaggagatgaccgtcctagcgaagaaga
tttctctaataggacggctcgtttcctccttgctatctggacatcggtct
cagaatggattagcatcatgctattgactgcgctgaat
gaattctcctgtccaaccccattcctggtacaaggattctccagaattct
ggctggccttaaattcaagagatccacctgcctctgcctcaggtgctggg
atcaaaggcattgcaccaccactgcccagctcccaagtgaattcttgcac
actataaatcaatggttcccaatctttctaatgcttaggccctttaatac
atttcgcgttgtgttgatttccaatcgtacatttctttgctacttcataa
ctcgaccactcttctgaattgtaatgtaaatatctgatatacaggattat
attctgatcccaggttgagactactgccttaactggagtaggttaaaaag
tacaaaagggtagccagaaatggtggagcacacctttatcacagaacttg
ggaggcagaagcaggtagatcggagttcaaggccagcctggtctaaatag
gagactccaggacggtcggggcgacatagatattctgtctcaataaggaa
ggacaaagggatcaagagctgacattttaatgatgcccttttcccaaact
actgggtaacttaaaataatttgcttgggccaggcatggtggtgcatgtc
tttaatcccagcactcgggaggcagaggcaggcggatttctgagttcgag
gccagtctggtctacaaagtgagttcacgggcagccagggctgcacagag
aaaccctgtctcgaaaaaacaaaacaaaacaaacaaaaaaaaaaaacttg
cttgacacaggagttagggcccacttttaagtcaactgtgccattcttga
gggccagactgaagtgttgttagaaaccgtaggaatacaacctacatact
tccccgaaccattcaactgaatactcagttgttataaattttact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_78224339_78225232
seq2: B6Ng01-205G19.g_69_963

seq1  GAATTCTCCTGTCCAACCCCATTCCTGGTACAAGGATTCTCCAGAATTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGTCCAACCCCATTCCTGGTACAAGGATTCTCCAGAATTCT  50

seq1  GGCTGGCCTTAAATTCAAGAGATCCACCTGCCTCTGCCTCAGGTGCTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCCTTAAATTCAAGAGATCCACCTGCCTCTGCCTCAGGTGCTGGG  100

seq1  ATCAAAGGCATTGCACCACCACTGCCCAGCTCCCAAGTGAATTCTTGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGGCATTGCACCACCACTGCCCAGCTCCCAAGTGAATTCTTGCAC  150

seq1  ACTATAAATCAATGGTTCCCAATCTTTCTAATGCTTAGGCCCTTTAATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAAATCAATGGTTCCCAATCTTTCTAATGCTTAGGCCCTTTAATAC  200

seq1  ATTTCGCGTTGTGTTGATTTCCAATCGTACATTTCTTTGCTACTTCATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCGCGTTGTGTTGATTTCCAATCGTACATTTCTTTGCTACTTCATAA  250

seq1  CTCGACCACTCTTCTGAATTGTAATGTAAATATCTGATATACAGGATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGACCACTCTTCTGAATTGTAATGTAAATATCTGATATACAGGATTAT  300

seq1  ATTCTGATCCCAGGTTGAGACTACTGCCTTAACTGGAGTAGGTTAAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGATCCCAGGTTGAGACTACTGCCTTAACTGGAGTAGGTTAAAAAG  350

seq1  TACAAAAGGGTAGCCAGAAATGGTGGAGCACACCTTTATCACAGAACTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAGGGTAGCCAGAAATGGTGGAGCACACCTTTATCACAGAACTTG  400

seq1  GGAGGCAGAAGCAGGTAGATCGGAGTTCAAGGCCAGCCTGGTCTAAATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAGAAGCAGGTAGATCGGAGTTCAAGGCCAGCCTGGTCTAAATAG  450

seq1  GAGACTCCAGGACGGTCGGGGCGACATAGATATTCTGTCTCAATAAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTCCAGGACGGTCGGGGCGACATAGATATTCTGTCTCAATAAGGAA  500

seq1  GGACAAAGGGATCAAGAGCTGACATTTTAATGATGCCCTTTTCCCAAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAAGGGATCAAGAGCTGACATTTTAATGATGCCCTTTTCCCAAACT  550

seq1  ACTGGGTAACTTAAAATAATTTGCTTGGGCCAGGCATGGTGGTGCATGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTAACTTAAAATAATTTGCTTGGGCCAGGCATGGTGGTGCATGTC  600

seq1  TTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAG  650

seq1  GCCAGTCTGGTCTACAAAGTGAGTTCACGGGCAGCCAGGGCTGCACAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTCTGGTCTACAAAGTGAGTTCACGGGCAGCCAGGGCTGCACAGAG  700

seq1  AAACCCTGTCTCGAAAAAACAAAACAAAACAAACAAAAAAAAAAAACTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTGTCTCGAAAAAACAAAACAAAACAAACAAAAAAAAAAAACTTG  750

seq1  CTTGACACAGGAGTTAGGGCCCACTTTTAAGTCAACTGTGCCATTCTTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACACAGGAGTTAGGGCCCACTTTTAAGTCAACTGTGCCATTCTTGA  800

seq1  GGGCCAGACTGAAGTGTTGTTAGAAACCGTAGGAATACAACCTACATAC-  849
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGGCCAGACTGAAGTGTTGTTAGAAACCGTAGGAATACAACCTACATACT  850

seq1  TCCCCGAACCA-TCAACTGAATACTCAAGTGTTTATAAATTTTACT  894
      ||||||||||| |||||||||||||| |||  ||||||||||||||
seq2  TCCCCGAACCATTCAACTGAATACTC-AGTTGTTATAAATTTTACT  895