BAC Information

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BAC

Clone NameB6Ng01-205I24
Chromosome9 (Build37)
Map Location 51,924,091 - 51,925,206
singlet/doubletsinglet
Overlap geneZc3h12c
Upstream geneBtg4, LOC100042825, Pou2af1, Gm684, 1810046K07Rik, LOC100042854, LOC640374, LOC668070, Arhgap20, LOC629554, LOC100043409, Fdx1, EG629557, Rdx, 9830163H01Rik
Downstream geneLOC100042876, AI593442, Gm1715, Ddx10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205I24.bB6Ng01-205I24.g
ACCGA025211GA025212
length8991,126
definitionB6Ng01-205I24.b B6Ng01-205I24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cttagtcgactgtagttgacctcatgtgtgctctcccatccatgttacta
tgcaactagtgttgctgtctttgttcagctcacattaggtagtcatgttg
gtgagactttataggtgtaactttataggtgtaacttattagtaggagac
acattctcacagcaaactctgtgcctttggcttttataatctatctactc
tatctttcacaatgttctctaagccttagataagtgtgggtgagttttgt
agatatctctctcaggactggactccacaactcttcatgttgatgggttg
tggttttatgcaacagcctccatttttgcaaagggaaattcccttgatga
ggggtgaggattacctttacctgtgagtaagatgtcaaatatttagaata
tgattagggattgtgctggttcttaataaggtggtagtactctctcctcc
aagacccatgacttcacctgccctgggttaggttttactaccaggcatgg
tctctcatattgagtgggtcttaagtccgattatccaaggtattcagacc
actgctacacacttagggttatgacgtcatgctggttgttgttgaggttc
ataggcatcatagctagacagaactgttggttgctttccccctttggaag
cttgcatggcaccttctggtaccatgaaagctaatctttagggaggagtc
attcagataagttccagcttaagagctgttaggccccctatgtctaaagt
acatgatatcttcagcaatagggacttaactgccacctcttgggggccaa
tcaagaacaatagcaatagggttacgtgtttgggagtctcttgacagccc
taatattgagggtttgtcaggcagtctctgggctcttgaagggagcatt
gaattcttttatgtaggtatgcatcagataagtgtagccctgttgctctt
catagcagactttcccacccagttgtaaagacgtggaagagaagaggcag
atctgatctgagagatcaacttcgagcttcctcggtgctcttcctagtaa
gcaagaagaccaaggagagcgaggaacacactaagacctagcccagctcc
catttctgcctttgttacacacgttcagatagccccgcctcactgactgt
gcaggacctcatggtgtgctcctttgcctaactgattttatctccctagg
aaagaagtgtacgtatggacacaagtgcaaatactaccacccagaaaggg
gcagtcagcctcagcggtcagtggctgatgaacttcgtgccatgtctaga
aacacagcagccaaaactacaaatgaagggggactggtgaaaagcaacag
tgttccttgcagcaccaaggcagacagcacttcggatgttaaacgcggtg
ctccaaagaggcagtcagacccaagcataaggactcacgtctaccaagac
atagaggagaagcttcccaccaaaaacaagttggaaaccaggtctgtacc
ttccttagttagtatcccggccacttctactgcaaaaccccaaagcacta
cacctttaagcaatggccttccatctggagttcatttcccacctcaggat
caaagaccacagggacaataccctccaatgatgatggcaaccaaaaatca
tggaacgccaatgccttatgaacagtatccaaaatgtgactcccctgttt
gacgtttggatattattccatgttgaatgcatattctaatctgagtatct
caggccccgaaagtcctgaaaggcgttttctcactagacactgattacag
agtaaaactctgtggccttcagactgcagcagtgaaagggagcatgagtt
gtgggaagcagcgacctctaacgtgggtacaatgaccgctcctatgtcag
ctctcctgacccacagctggaagagaagtctcaagttgttcagcacatgc
accccacaagcccgccttaattccagcccttcctgcagaaatttccacga
attgtaaccaagtcccagagttacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_51924091_51925206
seq2: B6Ng01-205I24.g_70_1195 (reverse)

seq1  CTGTAACTCT-GGACTCTGGTTAAGGGATCGTGGAAA-TTCTGCAGGAAG  48
      |||||||||| ||||| ||||| |    ||||||||| ||||||||||||
seq2  CTGTAACTCTGGGACT-TGGTT-ACAATTCGTGGAAATTTCTGCAGGAAG  48

seq1  GGCTGGGAATTAAGGC-GGCTGTGGGGGTGCATGTGCTGA--CACTTGAG  95
      |||| ||||||||||| ||||   ||||||||||||||||   |||||||
seq2  GGCT-GGAATTAAGGCGGGCTTGTGGGGTGCATGTGCTGAACAACTTGAG  97

seq1  AC-TCTCTTCCAGCTGTGGGTCAGGAGAGCTGACATAGGAGCGGTCATTG  144
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCTTCCAGCTGTGGGTCAGGAGAGCTGACATAGGAGCGGTCATTG  147

seq1  TACCCCACG-TAGGAGTCGCTGC-TCCCACAACTCATGCTCCC-TTCACT  191
      || |||||| |||  |||||||| ||||||||||||||||||| ||||||
seq2  TA-CCCACGTTAGAGGTCGCTGCTTCCCACAACTCATGCTCCCTTTCACT  196

seq1  GCTGCAGTCTGAA-GCCACAGAG-TTTACTCTGTAATCAGTGTCTAGTGA  239
      ||||||||||||| ||||||||| ||||||||||||||||||||||||||
seq2  GCTGCAGTCTGAAGGCCACAGAGTTTTACTCTGTAATCAGTGTCTAGTGA  246

seq1  G-AAACGCCTTTCAGGACTTCGGGGGCCTGAGATACTCAGATTAGAATAT  288
      | ||||||||||||||||||  ||||||||||||||||||||||||||||
seq2  GAAAACGCCTTTCAGGACTTTCGGGGCCTGAGATACTCAGATTAGAATAT  296

seq1  GCATTCAACATGGAATAATATCC-AACGTC-AACAGGGGAGTCACATTTT  336
      ||||||||||||||||||||||| |||||| |||||||||||||||||||
seq2  GCATTCAACATGGAATAATATCCAAACGTCAAACAGGGGAGTCACATTTT  346

seq1  GGATACTGTTCATAAGGCATTGGCGTTCCATGATTTTTGGTTGCCATCAT  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACTGTTCATAAGGCATTGGCGTTCCATGATTTTTGGTTGCCATCAT  396

seq1  CATTGGAGGGTATTGTCCCTGTGGTCTTTGATCCTGAGGTGGGAAATGAA  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGAGGGTATTGTCCCTGTGGTCTTTGATCCTGAGGTGGGAAATGAA  446

seq1  CTCCAGATGGAAGGCCATTGCTTAAAGGTGTAGTGCTTTGGGGTTTTGCA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGATGGAAGGCCATTGCTTAAAGGTGTAGTGCTTTGGGGTTTTGCA  496

seq1  GTAGAAGTGGCCGGGATACTAACTAAGGAAGGTACAGACCTGGTTTCCAA  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAGTGGCCGGGATACTAACTAAGGAAGGTACAGACCTGGTTTCCAA  546

seq1  CTTGTTTTTGGTGGGAAGCTTCTCCTCTATGTCTTGGTAGACGTGAGTCC  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTTTGGTGGGAAGCTTCTCCTCTATGTCTTGGTAGACGTGAGTCC  596

seq1  TTATGCTTGGGTCTGACTGCCTCTTTGGAGCACCGCGTTTAACATCCGAA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTTGGGTCTGACTGCCTCTTTGGAGCACCGCGTTTAACATCCGAA  646

seq1  GTGCTGTCTGCCTTGGTGCTGCAAGGAACACTGTTGCTTTTCACCAGTCC  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTCTGCCTTGGTGCTGCAAGGAACACTGTTGCTTTTCACCAGTCC  696

seq1  CCCTTCATTTGTAGTTTTGGCTGCTGTGTTTCTAGACATGGCACGAAGTT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCATTTGTAGTTTTGGCTGCTGTGTTTCTAGACATGGCACGAAGTT  746

seq1  CATCAGCCACTGACCGCTGAGGCTGACTGCCCCTTTCTGGGTGGTAGTAT  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGCCACTGACCGCTGAGGCTGACTGCCCCTTTCTGGGTGGTAGTAT  796

seq1  TTGCACTTGTGTCCATACGTACACTTCTTTCCTAGGGAGATAAAATCAGT  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTTGTGTCCATACGTACACTTCTTTCCTAGGGAGATAAAATCAGT  846

seq1  TAGGCAAAGGAGCACACCATGAGGTCCTGCACAGTCAGTGAGGCGGGGCT  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAAAGGAGCACACCATGAGGTCCTGCACAGTCAGTGAGGCGGGGCT  896

seq1  ATCTGAACGTGTGTAACAAAGGCAGAAATGGGAGCTGGGCTAGGTCTTAG  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAACGTGTGTAACAAAGGCAGAAATGGGAGCTGGGCTAGGTCTTAG  946

seq1  TGTGTTCCTCGCTCTCCTTGGTCTTCTTGCTTACTAGGAAGAGCACCGAG  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCCTCGCTCTCCTTGGTCTTCTTGCTTACTAGGAAGAGCACCGAG  996

seq1  GAAGCTCGAAGTTGATCTCTCAGATCAGATCTGCCTCTTCTCTTCCACGT  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTCGAAGTTGATCTCTCAGATCAGATCTGCCTCTTCTCTTCCACGT  1046

seq1  CTTTACAACTGGGTGGGAAAGTCTGCTATGAAGAGCAACAGGGCTACACT  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACAACTGGGTGGGAAAGTCTGCTATGAAGAGCAACAGGGCTACACT  1096

seq1  TATCTGATGCATACCTACATAAAAGAATTC  1116
      ||||||||||||||||||||||||||||||
seq2  TATCTGATGCATACCTACATAAAAGAATTC  1126