BAC Information

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BAC

Clone NameB6Ng01-212I06
Chromosome9 (Build37)
Map Location 120,279,791 - 120,280,510
singlet/doubletsinglet
Overlap geneMyrip
Upstream geneXylb, Acvr2b, Endogl1, Scn5a, Scn10a, Scn11a, LOC100039837, Wdr48, Gorasp1, Ttc21a, Axud1, Cmya1, Cx3cr1, Ccr8, Slc25a38, Rpsa, Snora62, EG546166, Mobp, LOC100039898, LOC666044
Downstream geneEif1b, LOC638068, Entpd3, Rpl14, 5830454E08Rik, LOC100040010, Ctnnb1, Ulk4, Trak1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212I06.bB6Ng01-212I06.g
ACCGA030290GA030291
length722837
definitionB6Ng01-212I06.b B6Ng01-212I06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagatgctgtggttggcgctgaggatgcagtgagcgaagccatt
catgccccagtgggaaggcagaggtcagccggataatcacagaagtggga
ctggagagatggctcatcggttacagcactggctgctctttcaaaggacc
tgggttccaggccagcattcccatgcagctcactactccctgtaatacca
ctccttcacccctcggccgccatccccccccaacacacacacacacacac
atacacacacacacacacacacacacacacacacacacatacacacacac
atacacacacacatacacacacacacacatacacacacacacacacacac
acacacacacacacacacttgaggttggcaatggggaggggaggtcgcca
ggccttgggacaggggaatcacttcttgatggatgcacactgagtttcct
gagatggagacttctgagtgagaaccacgtgaatgaatgcacactgtgga
tgtatttcataccactgaaatcggaccttgggatggttaatctggtaaat
gattgtgtttgtgatgtggtaaatggtatattttctcaccctttcttctt
aatcatcttggggctggagagacggtaagcctattctagacatctgaatt
cgtttcgggccccccatcttggggtggctcagagctgctctgtaggtccc
ggtggcaggagatcagatgccc
gaattcagcctacgggttaccacagccacatgcttctgtgtggcacagcc
cggaggactctgtgtcctggggactttacactgttatggagttctgctct
gcttgctgccctcacttccctcttaatctgagagttatgaaagctttaat
gggccctccagcccctcactgggcagtatctcaggcactcacaatactaa
tgcttgctctctttcaggcattgctgctggagcagttaatgattcaatct
ccaccctaggaaagggcttggaaatgtagcttgtcaacgatgaccaccac
ccttgggaggcaattttgcttcatccactctgtgtgtgtgtgcgcgagca
ttgggctcctctctttctttctcttcctctccagccccaaggagttaaaa
gagttcatagttttcccaatggccacagggagtgccggcctcagtaaatt
aagctttgttccctgagagaaaagtctgctaagaaacttctctaatcgct
ggctgccattggcagcagcccctgtgggtatctggatccaccccatagtg
gctctaagcactggcccccaacagtgtacccaccacatggatgacaaagc
tgggcactggcaaccctctgtttagtgtggtcaaacatggcttgaatgtg
gttctcatgacacatgcagcacgtgtcaccaggcatagcagtgtatgccc
ttaaccccagcattcaggaggcagaggctggctcattgtgagttccagac
cagcccgaactacacagagagacactgtctctgaaaaaggaggagaagaa
gatgaaaaaaaagaggaggaggaggaggagggggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_120279791_120280510
seq2: B6Ng01-212I06.b_43_764

seq1  GAATTCCAGATGCTGTGGTTGGCGCTGAGGATGCAGTGAGCGAAGCCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATGCTGTGGTTGGCGCTGAGGATGCAGTGAGCGAAGCCATT  50

seq1  CATGCCCCAGTGGGAAGGCAGAGGTCAGCCGGATAATCACAGAAGTGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCCCAGTGGGAAGGCAGAGGTCAGCCGGATAATCACAGAAGTGGGA  100

seq1  CTGGAGAGATGGCTCAGCGGTTACAGCACTGGCTGCTCTTTCAAAGGACC  150
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTGGAGAGATGGCTCATCGGTTACAGCACTGGCTGCTCTTTCAAAGGACC  150

seq1  TGGGTTCCAGGCCAGCATTCCCATGCAGCTCACTACTCCCTGTAATACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCCAGGCCAGCATTCCCATGCAGCTCACTACTCCCTGTAATACCA  200

seq1  CTCCTTCACCCCTCGGCCGCCATCCCCCCCCAACACACACACACACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCACCCCTCGGCCGCCATCCCCCCCCAACACACACACACACACAC  250

seq1  ATACACACACACACACACACACACACACACACACACACATACACACACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACACACACACACACACACACACACACACACACATACACACACAC  300

seq1  ATACACACACACATACACACACACACACATACACACACACACACACACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACACACATACACACACACACACATACACACACACACACACACAC  350

seq1  ACACACACACACACACACTTCAGGTTGGCAATGGTGAGGGGAGGTCGCCA  400
      |||||||||||||||||||| ||||||||||||| |||||||||||||||
seq2  ACACACACACACACACACTTGAGGTTGGCAATGGGGAGGGGAGGTCGCCA  400

seq1  GGCCTTGGGACAGGGGAATCACTTCTTGATGGATGCAGACTGAGTTTCAT  450
      ||||||||||||||||||||||||||||||||||||| |||||||||| |
seq2  GGCCTTGGGACAGGGGAATCACTTCTTGATGGATGCACACTGAGTTTCCT  450

seq1  AAGATGGAGAGTTCTGAGTGTGAACCACGTGAATGAATGCACACTGTGGA  500
       ||||||||| ||||||||| |||||||||||||||||||||||||||||
seq2  GAGATGGAGACTTCTGAGTGAGAACCACGTGAATGAATGCACACTGTGGA  500

seq1  TGTATTTCATACCACTGAGCCAGGCCCTTAGGATGGTTAATCTGGTAAAT  550
      ||||||||||||||||||    || |||| ||||||||||||||||||||
seq2  TGTATTTCATACCACTGAAATCGGACCTTGGGATGGTTAATCTGGTAAAT  550

seq1  GATTGTGTTTGTGATGTGGTAAATGGTATATTTAGTCACAGTTGTCTTTC  600
      |||||||||||||||||||||||||||||||||  ||||  || ||||  
seq2  GATTGTGTTTGTGATGTGGTAAATGGTATATTTTCTCACCCTT-TCTTCT  599

seq1  TAATCATCTTGGGGCTGGAGAGATGGTATGACTATTCTAGACGACCTGAA  650
      ||||||||||||||||||||||| |||| | ||||||||||| | |||||
seq2  TAATCATCTTGGGGCTGGAGAGACGGTAAGCCTATTCTAGAC-ATCTGAA  648

seq1  TTTGTTCCCAG-CCCCCATCAT-GGGTGGCTCAGAGCTGC-CTGTAGGTC  697
      || ||| |  | |||||||| | ||||||||||||||||| |||||||||
seq2  TTCGTTTCGGGCCCCCCATCTTGGGGTGGCTCAGAGCTGCTCTGTAGGTC  698

seq1  CAGGT-CCAGGAGATCAGATGCCC  720
      | |||  |||||||||||||||||
seq2  CCGGTGGCAGGAGATCAGATGCCC  722