BAC Information

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BAC

Clone NameB6Ng01-219K23
Chromosome9 (Build37)
Map Location 22,592,846 - 22,593,955
singlet/doubletsinglet
Overlap geneBbs9
Upstream geneAnkrd25, Dock6, EG624219, Rab3d, BC010787, 2510048L02Rik, BC018242, 2310047B19Rik, Epor, Rgl3, C330001K17Rik, Prkcsh, Elavl3, Zfp653, Ecsit, EG625409, Cnn1, Elof1, Acp5, Pigyl, LOC100034724, 9530015I07Rik, 1810064F22Rik, Zfp809, BC050092, Zfp810, LOC100041826, EG625603, Anln, 9530077C05Rik, rp9, LOC100041870, LOC100040805
Downstream geneBmper, LOC100040866
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219K23.bB6Ng01-219K23.g
ACCGA035450GA035451
length1,1671,115
definitionB6Ng01-219K23.b B6Ng01-219K23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattataaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacactattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaaggagctaaagggatctgcaaccct
atagtggacacattatgagctaacagtaccccggagctcttgactctagc
tgcattatatatcaaaagatggctagtcgcatcactggcaagaaaggcca
tgactgcaaccttataatgcccagtacaggaataccaggcccaaaatggg
gagatggggtggggcta
gaattcttgtgtaggtgagtagactaagcctgagagaggtaaaagttgaa
cagcttggaattggctttgcccatattcatacataagccttattgactcc
agagtcacatgactattctgacattttgaatgtcattaagcattaatggt
gttagccgttaatggatgaaaacttcttcttttacttttctcatcattgt
ggttagatagctgacaggaaccaacttgttttggcgcccggtttaaagaa
agtgtcccattgctggggagagatagtagaggactggcatggaggcagtt
gactccctgggcagggagggcctgtctgcttgcttcccaggctctctgtt
gtttgccgtttgatcctttctgtaattctttctccttatttttaagatgt
ggccaataatggtagctacctcctagggttgtttgtgagaatgaaacgga
ctaatccacataaagacttcagcctgggtttggttcctagaaagccttca
gtgaaatcttgacaattatcacaaatgcgggcttatttagacaattgaaa
acattgtaacttgtgattcatagaaaaatggatgaatcacccttttctga
aaaagtagcttctctaaagggatggcctgcagaatcactgttgtgcaact
ttcacatcgctgaactatacagaatataccactccctttgtttagagaaa
atgagattgtggtcaggtcgaattcttacacattatgaactgctgccttc
tgatgtgactttgggaagaaagcagccatcttcagttctcgtgttgaaag
ccccaaggatgtaaggtgtaactaaaggacatgcctgtggcaggtatgtt
atctgagcagtgcttaccttacgttatcaaaggaggatccactgctggtc
ttgtagggtcacctgtggatactcatatttctgtgcagacagagggcact
cattgagaaggcagcaaacacactggaatcctgcagttctctgcccttgc
tcattgccctggcccatgtgcacagaagacttcttagccttcatctctca
ctggggaatggacaactgtcagcactttctaatcctctgagtgacggaat
gcttaccgggctcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_22592846_22593955
seq2: B6Ng01-219K23.g_67_1181

seq1  GAATTCTTGTGTAGGTGAGTAGACTAAGCCTGAGAGAGGTAAAAGTTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTGTAGGTGAGTAGACTAAGCCTGAGAGAGGTAAAAGTTGAA  50

seq1  CAGCTTGGAATTGGCTTTGCCCATATTCATACATAAGCCTTATTGACTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTGGAATTGGCTTTGCCCATATTCATACATAAGCCTTATTGACTCC  100

seq1  AGAGTCACATGACTATTCTGACATTTTGAATGTCATTAAGCATTAATGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCACATGACTATTCTGACATTTTGAATGTCATTAAGCATTAATGGT  150

seq1  GTTAGCCGTTAATGGATGAAAACTTCTTCTTTTACTTTTCTCATCATTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCCGTTAATGGATGAAAACTTCTTCTTTTACTTTTCTCATCATTGT  200

seq1  GGTTAGATAGCTGACAGGAACCAACTTGTTTTGGCGCCCGGTTTAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGATAGCTGACAGGAACCAACTTGTTTTGGCGCCCGGTTTAAAGAA  250

seq1  AGTGTCCCATTGCTGGGGAGAGATAGTAGAGGACTGGCATGGAGGCAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCCCATTGCTGGGGAGAGATAGTAGAGGACTGGCATGGAGGCAGTT  300

seq1  GACTCCCTGGGCAGGGAGGGCCTGTCTGCTTGCTTCCCAGGCTCTCTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCCTGGGCAGGGAGGGCCTGTCTGCTTGCTTCCCAGGCTCTCTGTT  350

seq1  GTTTGCCGTTTGATCCTTTCTGTAATTCTTTCTCCTTATTTTTAAGATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCCGTTTGATCCTTTCTGTAATTCTTTCTCCTTATTTTTAAGATGT  400

seq1  GGCCAATAATGGTAGCTACCTCCTAGGGTTGTTTGTGAGAATGAAACGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAATAATGGTAGCTACCTCCTAGGGTTGTTTGTGAGAATGAAACGGA  450

seq1  CTAATCCACATAAAGACTTCAGCCTGGGTTTGGTTCCTAGAAAGCCTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCCACATAAAGACTTCAGCCTGGGTTTGGTTCCTAGAAAGCCTTCA  500

seq1  GTGAAATCTTGACAATTATCACAAATGCGGGCTTATTTAGACAATTGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATCTTGACAATTATCACAAATGCGGGCTTATTTAGACAATTGAAA  550

seq1  ACATTGTAACTTGTGATTCATAGAAAAATGGATGAATCACCCTTTTCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTAACTTGTGATTCATAGAAAAATGGATGAATCACCCTTTTCTGA  600

seq1  AAAAGTAGCTTCTCTAAAGGGATGGCCTGCAGAATCACTGTTGTGCAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAGCTTCTCTAAAGGGATGGCCTGCAGAATCACTGTTGTGCAACT  650

seq1  TTCACATCGCTGAACTATACAGAATATACCACTCCCTTTGTTTAGAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATCGCTGAACTATACAGAATATACCACTCCCTTTGTTTAGAGAAA  700

seq1  ATGAGATTGTGGTCAGGTCGAATTCTTACACATTATGAACTGCTGCCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATTGTGGTCAGGTCGAATTCTTACACATTATGAACTGCTGCCTTC  750

seq1  TGATGTGACTTTGGGAAGAAAGCAGCCATCTTCAGTTCTCGTGTTGAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGACTTTGGGAAGAAAGCAGCCATCTTCAGTTCTCGTGTTGAAAG  800

seq1  CCCCAAGGATGTAAGGTGTAACTAAAGGACATGCCTGTGGCAGGTATGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAGGATGTAAGGTGTAACTAAAGGACATGCCTGTGGCAGGTATGTT  850

seq1  ATCTGAGCAGTGCTTACCTTACGTTATCAAAGGAGGATCCACTGCTGGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGCAGTGCTTACCTTACGTTATCAAAGGAGGATCCACTGCTGGTC  900

seq1  TTGTAGGGTCACCTGTGGATACTCATATTTCTGTGCAGACAGAGGGCACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGGGTCACCTGTGGATACTCATATTTCTGTGCAGACAGAGGGCACT  950

seq1  CATTGAGAAGGCAGCAAACACACTGGAATCCTGGCAGTTCTCTGCCCTTG  1000
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CATTGAGAAGGCAGCAAACACACTGGAATCCT-GCAGTTCTCTGCCCTTG  999

seq1  CTCATTGCCCTGGCCCATGTGCACAGAAGAC-TCTAAGCCTTCATCTCTT  1049
      ||||||||||||||||||||||||||||||| ||| |||||||||||| |
seq2  CTCATTGCCCTGGCCCATGTGCACAGAAGACTTCTTAGCCTTCATCTC-T  1048

seq1  CACTGGGAAATGGAC-ACTGTCAGCACTTTCTA--TCTCTGAGTGACGG-  1095
      ||||||| ||||||| |||||||||||||||||   ||||||||||||| 
seq2  CACTGGGGAATGGACAACTGTCAGCACTTTCTAATCCTCTGAGTGACGGA  1098

seq1  ATGCTAAC--GGCTCTA  1110
      ||||| ||  |||||||
seq2  ATGCTTACCGGGCTCTA  1115