BAC Information

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BAC

Clone NameB6Ng01-240O02
Chromosome9 (Build37)
Map Location 10,765,172 - 10,766,312
singlet/doubletsinglet
Overlap genenone
Upstream geneCntn5, LOC665154, LOC100039970, LOC665178
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240O02.bB6Ng01-240O02.g
ACCGA050936GA050937
length1,1511,126
definitionB6Ng01-240O02.b B6Ng01-240O02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctggatactttgcattaggatctttttgcattttgcattttctt
tgactgttgcatcaatgttttctatggtatctgagaatctctcttccatc
tcttatattctattggtggtttttgcatttatgactcctgatctctttcc
taggttttctatctgaaggttgtctccctttgtgaattctttgttgtttc
tatttccattttttagatcctggatggttttgttcaattccttcacttct
ttggttgtgttttaccgcaactctttaagagatttttgtgtttcctcttt
aagtgcttcaagctgtatacttgtgttctcctgtatttctttaagggagt
tatttatctccttgttaaattcctctatcatcatcatgagatgtgatttt
aaatctgagtccttttctggtgtgttggggtatccacttctcactgtggt
gggataactgggttctaaggatgccaagtagccttggattctgttgctta
tgttcttgaccttgtctctcgacatctggttatctctgctgttagctggt
cctactatctttgacaggggcttgtccctcctgcaagcctgtatgtcaga
acttctaggaaattagttctctctgggaggaatttgggcatagacagttg
tggcatatggtcagctccagggtgcagacagtaattggaaagatcctgtc
ctcagttgttccttgtttcttgtgtcctgatggctcggggagggtccctc
ttgggtccaggaatttgagcagaagtggtggtcttacctgtgttcacagg
tgagtcagcactcctgagagactagctctctcccagcagtatttggctat
ggatcattgaggcacaggatcagctccagtctcagacagaaccggaagga
tcctatcctaggctgctcctttggttcttgtgtcctgagagtcccagtgg
gtctctctgagcagagtagtggtctttatgtgtgctcacagcttgtcaac
actcctaggagacctgtctctcttgtttgtatttgatgtggagcacttgg
ggcacagatagtcttaggcacaaaattacctgtagcatctgactcttata
ataaacagtacattttgtctttcgtgtaagagaaagcgataacactttca
g

gaattccaactggttttaattttgcaataatatcttttggaaaatacttt
cgagcttcattgttgaataatttataatacaggtagcataaatttgtagt
ataagataaagttttcaaatttttagaatgtcttataatcaccacatcaa
tgctcctggtgtcctatgtctcaagaacatttagcatgctctttattttc
atgtatgtttttatttctgctaagtttatagattaaaaaaaaggattctg
atcatttgatcctattcttcctcttcaattctccagcatcctctatctca
tttgtctcccaaattcatctgatccttttcttatacctacggagtgttga
ccatgtgtacaggtgtaggtcaaccagctgggcaggcaccctaccaaggg
ctatacccttgaaaaaaagtgatctcctacccacagtagccattattact
attaatagctcttcaggaaggaatgtagcctttcaagcctctctctaatc
catactgtacatttcgatgtctagagatttgcatatgcatgcacacaatg
ggaattttgttccctttaccgtgacaatttccatttgaggaaatttgaga
ttgattctgcaaaaccgatgaaaaaactccaaggaagacacagaccaatc
ctaacaatcctagcagctaagggaagcaataacctgttcttcactttaag
aacaaacagctggagaaaggagatgaaaacaatgaagcttttgaatatat
atgactttggtaaaacaaaagtaaagagagaacacagaagttgctctttc
ttggggaattttgacactttagtaattaggaaaacttgactatctcagag
ctgactctatttcagtttgtttggtaactggcttgtcagatattcattct
aaattaaattctaaagctgtagaaacatcagcatgtagttagatatctgc
gttaaattatttttgattttcagataacagcttttatttaaaaaataagt
gtgatttctaaatatggaggagtgaggcgcttgcagtgatgacccatctt
agtgaacgtggattaccgagtctggatcaaatattttcagaatggtcatc
agtcagctgacaaagtacagtctagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_10765172_10766312
seq2: B6Ng01-240O02.g_61_1186 (reverse)

seq1  GCTAGACACTTGTACTTTTGCAGCTGACTGATGACTATCTGGAAAATA-T  49
      |||||||   ||||||||  ||||||||||||||| ||   ||||||| |
seq2  GCTAGAC---TGTACTTTGTCAGCTGACTGATGACCATTCTGAAAATATT  47

seq1  TGATCCCAGACTCGGGTAAATCCACGTTCACTAAAGGATGGGTTCATCAA  99
      |||| ||||||||||   ||||||||||||||||  |||||| ||||| |
seq2  TGAT-CCAGACTCGG--TAATCCACGTTCACTAA--GATGGG-TCATC-A  90

seq1  CTGCCAGCCGCCTCACTCCTTCCATATTTTAGAAATCACACTTATTTTTT  149
      |||| || ||||||||||| |||||| |||||||||||||||||||||||
seq2  CTGCAAG-CGCCTCACTCC-TCCATA-TTTAGAAATCACACTTATTTTTT  137

seq1  AAATAAAAGCCTGTTTATCTGAAAATCAAAAATAATTTAAACGCAGAATA  199
      ||||||||| ||| |||||||||||||||||||||||| ||||||| |||
seq2  AAATAAAAG-CTG-TTATCTGAAAATCAAAAATAATTT-AACGCAG-ATA  183

seq1  TCTAACTACATGCTGATGTTTCTACAGCTTTAGAA-TTAATTTAGAATGA  248
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCTAACTACATGCTGATGTTTCTACAGCTTTAGAATTTAATTTAGAATGA  233

seq1  ATATCTGACAAGCCAGTTACCAAACAAACTGAAATAGAGTCAGCTCTGAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGACAAGCCAGTTACCAAACAAACTGAAATAGAGTCAGCTCTGAG  283

seq1  ATAGTCAAGTTTTCCTAATTACTAAAGTGTCAAAATTCCCCAAGAAAGAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCAAGTTTTCCTAATTACTAAAGTGTCAAAATTCCCCAAGAAAGAG  333

seq1  CAACTTCTGTGTTCTCTCTTTACTTTTGTTTTACCAAAGTCATATATATT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCTGTGTTCTCTCTTTACTTTTGTTTTACCAAAGTCATATATATT  383

seq1  CAAAAGCTTCATTGTTTTCATCTCCTTTCTCCAGCTGTTTGTTCTTAAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCTTCATTGTTTTCATCTCCTTTCTCCAGCTGTTTGTTCTTAAAG  433

seq1  TGAAGAACAGGTTATTGCTTCCCTTAGCTGCTAGGATTGTTAGGATTGGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAACAGGTTATTGCTTCCCTTAGCTGCTAGGATTGTTAGGATTGGT  483

seq1  CTGTGTCTTCCTTGGAGTTTTTTCATCGGTTTTGCAGAATCAATCTCAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCTTCCTTGGAGTTTTTTCATCGGTTTTGCAGAATCAATCTCAAA  533

seq1  TTTCCTCAAATGGAAATTGTCACGGTAAAGGGAACAAAATTCCCATTGTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCAAATGGAAATTGTCACGGTAAAGGGAACAAAATTCCCATTGTG  583

seq1  TGCATGCATATGCAAATCTCTAGACATCGAAATGTACAGTATGGATTAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCATATGCAAATCTCTAGACATCGAAATGTACAGTATGGATTAGA  633

seq1  GAGAGGCTTGAAAGGCTACATTCCTTCCTGAAGAGCTATTAATAGTAATA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCTTGAAAGGCTACATTCCTTCCTGAAGAGCTATTAATAGTAATA  683

seq1  ATGGCTACTGTGGGTAGGAGATCACTTTTTTTCAAGGGTATAGCCCTTGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTACTGTGGGTAGGAGATCACTTTTTTTCAAGGGTATAGCCCTTGG  733

seq1  TAGGGTGCCTGCCCAGCTGGTTGACCTACACCTGTACACATGGTCAACAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTGCCTGCCCAGCTGGTTGACCTACACCTGTACACATGGTCAACAC  783

seq1  TCCGTAGGTATAAGAAAAGGATCAGATGAATTTGGGAGACAAATGAGATA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTAGGTATAAGAAAAGGATCAGATGAATTTGGGAGACAAATGAGATA  833

seq1  GAGGATGCTGGAGAATTGAAGAGGAAGAATAGGATCAAATGATCAGAATC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGCTGGAGAATTGAAGAGGAAGAATAGGATCAAATGATCAGAATC  883

seq1  CTTTTTTTTAATCTATAAACTTAGCAGAAATAAAAACATACATGAAAATA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTTAATCTATAAACTTAGCAGAAATAAAAACATACATGAAAATA  933

seq1  AAGAGCATGCTAAATGTTCTTGAGACATAGGACACCAGGAGCATTGATGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCATGCTAAATGTTCTTGAGACATAGGACACCAGGAGCATTGATGT  983

seq1  GGTGATTATAAGACATTCTAAAAATTTGAAAACTTTATCTTATACTACAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATTATAAGACATTCTAAAAATTTGAAAACTTTATCTTATACTACAA  1033

seq1  ATTTATGCTACCTGTATTATAAATTATTCAACAATGAAGCTCGAAAGTAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGCTACCTGTATTATAAATTATTCAACAATGAAGCTCGAAAGTAT  1083

seq1  TTTCCAAAAGATATTATTGCAAAATTAAAACCAGTTGGAATTC  1141
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAAAGATATTATTGCAAAATTAAAACCAGTTGGAATTC  1126


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