BAC Information

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BAC

Clone NameB6Ng01-248B19
Chromosome9 (Build37)
Map Location 39,955,215 - 39,955,681
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945, GA_x5J8B7W60AJ-354484-355428, Olfr947-ps1, Olfr948, LOC667312, Olfr949-ps1, Olfr950-ps1, Olfr951, Olfr952, Olfr953-ps1, Olfr954, Olfr955, Olfr956-ps1, Olfr44, Olfr957, Olfr958, Olfr959, AW551984, Olfr148, Olfr960, Olfr961, GA_x5J8B7W60AJ-4787-4010, Olfr963, Olfr964-ps1, Olfr149, Olfr965, Olfr966-ps1, Olfr150, Olfr967, Olfr968, Olfr969, Olfr970, Olfr971, Olfr972, Olfr973, LOC100043015, Olfr974, Olfr975, Olfr976, Olfr977-ps1, Olfr978, Olfr979, Olfr980, Olfr981, 1700001J11Rik, Olfr982, Olfr983, Olfr984, Olfr985
Downstream gene1700030E15Rik, LOC235279, Olfr986, Zfp202, Scn3b, Gramd1b, LOC270148, 9030425E11Rik, LOC100043076, LOC100043071, Hspa8, Bsx, 4931429I11Rik, Crtam, 2810457I06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248B19.bB6Ng01-248B19.g
ACCGA056271GA056272
length4611,150
definitionB6Ng01-248B19.b B6Ng01-248B19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tctgtctgttggtttgacccttgaccttggtacctagggcattggaacca
ctaaggttctttgaaagagctacaatgtgatgaggtctgatttcacactc
ctccacacacactcataccccttcacacccctccatctcccgagagagaa
agagagagagaggggagagagagagagagagagagaaagagagagagaga
gagagagagagagagagagagagagagagagagagagagagagatttcaa
agacttaacgggcttaactgaagaggtcctagtcctgtactgcatcggaa
tacttgtgtagagggttagtgacacacagtggagattgagaaaaggagaa
tcctaaggtcgtttggatgagtgctcagttagttggaaccataagaggta
atgccttctcaggaccaatgacctttgggttctttaagaggggaattctg
tgtaaatctgc
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgtgat
tccacttcactccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgttggcgtggatgtggagaaaggggaacactcctccattgttggtg
agattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagactaccggaggatcccgcaatacctctcctgggca
tatatccagaagatgtcccaaccggtaagaagaacacatgctccactatg
ttcatagcagccttgtttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
aatactactcagctattaaaaaaatgaatttatgaaattcctaggcaaat
ggatggacctggagggtatcatcctgagtgtagtaacccaatcacaaagg
aactctcactatatgtactcactgataagtggataatagcccagaaactt
aggatacccaagatataagatacaacttgccaaacgcatgaattcaagaa
gaacgaagaccaaagtgtggacactttaccctttcttagaaatgggaaca
aaacacccatagaaggagttacagagacaaaatttggagctgtgaccaaa
ggatggaccatctagtgactgctatatgcagggatccatcccataatcag
cttccaaatgctgacaccattgcatacactagcaagatttcgctgaaagg
acccagttatagctctctcttgtgagactatgccggggcctaccaacaca
gtagtggatgctcacagtcagctattggatgggtcacacggccctaatgg
aggagctagagaaattacccaaggagctaagggactgcaaccttatagtg
accacatatggactacagtaccgggagctcttgtctttagctgcatatgt
tatcaaagatgctagctgtcaatcactgcagagagcccaatggaacgtgc
aacttattgccagtacatggaacgcccagccaaaacgcggattgcgtgtg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_39955215_39955681
seq2: B6Ng01-248B19.b_45_511 (reverse)

seq1  GCAGATTTACACAGAATTCCCCTCTTAAAGAACCCAAAGGTCCTTGGTCC  50
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GCAGATTTACACAGAATTCCCCTCTTAAAGAACCCAAAGGTCATTGGTCC  50

seq1  TGTGAAGGCATTACCTCTTATGGTTCCAACTAACTGAGCACTCATCCAAA  100
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGGCATTACCTCTTATGGTTCCAACTAACTGAGCACTCATCCAAA  100

seq1  CGACCTTAGGATTCTCCTTTTCTCAATCTCCACTGTGTGTCACTAACCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACCTTAGGATTCTCCTTTTCTCAATCTCCACTGTGTGTCACTAACCCT  150

seq1  CTACACAAGTATTCCGATGCAGTACAGGACTAGGACCTCTTCAGTTAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACAAGTATTCCGATGCAGTACAGGACTAGGACCTCTTCAGTTAAGC  200

seq1  CCGTTAAGTCTTTGAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTAAGTCTTTGAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  250

seq1  CTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCCCC  300

seq1  TCTCTCTCTCTTTCTCTCTCGGGAGATGGAGGGGTGTGAAGGGGTATGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTTTCTCTCTCGGGAGATGGAGGGGTGTGAAGGGGTATGAG  350

seq1  TGTGTGTGGAGGAGTGTGAAATCAGACCTCATCACATTGTAGCTCTTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGGAGGAGTGTGAAATCAGACCTCATCACATTGTAGCTCTTTCA  400

seq1  AAGAACCTTAGTGGTTCCAATGCCCTAGGTACCAAGGTCAAGGGTCAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACCTTAGTGGTTCCAATGCCCTAGGTACCAAGGTCAAGGGTCAAAC  450

seq1  CAACAGACAGAGAATTC  467
      |||||||||||||||||
seq2  CAACAGACAGAGAATTC  467