BAC Information

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BAC

Clone NameB6Ng01-257D11
Chromosome9 (Build37)
Map Location 22,765,547 - 22,766,695
singlet/doubletsinglet
Overlap genenone
Upstream geneEpor, Rgl3, C330001K17Rik, Prkcsh, Elavl3, Zfp653, Ecsit, EG625409, Cnn1, Elof1, Acp5, Pigyl, LOC100034724, 9530015I07Rik, 1810064F22Rik, Zfp809, BC050092, Zfp810, LOC100041826, EG625603, Anln, 9530077C05Rik, rp9, LOC100041870, Bbs9, LOC100040805
Downstream geneBmper, LOC100040866, LOC100040878, LOC100040893
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257D11.bB6Ng01-257D11.g
ACCGA062972GA062973
length1,159418
definitionB6Ng01-257D11.b B6Ng01-257D11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttggaaatggatttagagttgaaatccacagcaggaagatc
ttccatttttcttacctaagttttctggctcttgggtagtggaagcagaa
aggaatgtgtttaaagtgtaggtatcctggctgctatcactggctgagcc
accgaaggtgattgtcatgcttgggggtggagtctcagccacactcactc
aggaccttttattggggtggtaacaaaagtgttcctcctgtaaatgatca
cagaaaggatgatctgaattaatttgggggaatttcatttcttagctcaa
atgttaacattgcctcccaccagtaaccataaactaggacctgctctgcc
acctcccctatgtttaaccaagctaacctaaaaagcaaagctttagagct
agtctgcttacccttaactgagaattaccatctgccttactatctttctg
ttggatgggtcacagtctattagccttattgaatactactgtttgcaaag
attgttctaaaatcagtatgatttctggaatgaaggcatttccagcacag
gaaaaatacaaccgagaaggacacagttgaggtactgagagaattttcca
tgtgcaccacccctcaggaaattttgtggcaaacctaccataccattgac
attcaaacaaattcaacctcaaataccagatcaaatttaagttggtgaaa
ttttgagggaggcagggttagctgtctgtgttcattgtcttggaaggcaa
agtccttttgcctttagagggcatacatgtaacttacatagtagaccttg
gcagtggatatatacatccctgaatctatacaccagcagatacagccaat
cacagatcaaaatactagaaaaaaaatacatatatcttgaacatatagac
ttcttttcttgccacaagtccataaataatttggtaaataatacatattt
actttacatttatgtattataagtaacccagaggtgatttaggtatgggg
atgggtatgcctattattataaatattaatgccttcatatatgaagtatt
gagcatccctcaaatttaggtatcctagaaggatcccgtgatgtcactca
ccctaaaacgtctagggggataccatataactctctgtacaacagtacgg
agagtgggg
tggtttgggggcttgatcatcaaatgcttttgccctctaagctatctgcc
agcccaagaaagttaggcttaactcacacatttaaaaacagataatccta
gcaagattttgctgaaaggactctgatatagctgtctcttgtgaggctat
gccggggcctagcaaatacagaagtggatgctcacagtcagctattggat
ggatcacagggcccccaatggagggactagagaaagtacccaaggagcta
aaggggtctgcaaccctataggtggaacaacactatgaactaaccagtct
ctgactgcatatgtatcagaagatggcctagttgcccatcaatggaaaga
gaggcccattggtcttgcaaactttatgtgcctcagtagaggggaatgcc
agggccaagaagtgggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_22765547_22766695
seq2: B6Ng01-257D11.b_50_1208

seq1  GAATTCACTTTGGAAATGGATTTAGAGTTGAAATCCACAGCAGGAAGATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGGAAATGGATTTAGAGTTGAAATCCACAGCAGGAAGATC  50

seq1  TTCCATTTTTCTTACCTAAGTTTTCTGGCTCTTGGGTAGTGGAAGCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTTTCTTACCTAAGTTTTCTGGCTCTTGGGTAGTGGAAGCAGAA  100

seq1  AGGAATGTGTTTAAAGTGTAGGTATCCTGGCTGCTATCACTGGCTGAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGTGTTTAAAGTGTAGGTATCCTGGCTGCTATCACTGGCTGAGCC  150

seq1  ACCGAAGGTGATTGTCATGCTTGGGGGTGGAGTCTCAGCCACACTCACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAAGGTGATTGTCATGCTTGGGGGTGGAGTCTCAGCCACACTCACTC  200

seq1  AGGACCTTTTATTGGGGTGGTAACAAAAGTGTTCCTCCTGTAAATGATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCTTTTATTGGGGTGGTAACAAAAGTGTTCCTCCTGTAAATGATCA  250

seq1  CAGAAAGGATGATCTGAATTAATTTGGGGGAATTTCATTTCTTAGCTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGGATGATCTGAATTAATTTGGGGGAATTTCATTTCTTAGCTCAA  300

seq1  ATGTTAACATTGCCTCCCACCAGTAACCATAAACTAGGACCTGCTCTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAACATTGCCTCCCACCAGTAACCATAAACTAGGACCTGCTCTGCC  350

seq1  ACCTCCCCTATGTTTAACCAAGCTAACCTAAAAAGCAAAGCTTTAGAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCCCTATGTTTAACCAAGCTAACCTAAAAAGCAAAGCTTTAGAGCT  400

seq1  AGTCTGCTTACCCTTAACTGAGAATTACCATCTGCCTTACTATCTTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGCTTACCCTTAACTGAGAATTACCATCTGCCTTACTATCTTTCTG  450

seq1  TTGGATGGGTCACAGTCTATTAGCCTTATTGAATACTACTGTTTGCAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGGGTCACAGTCTATTAGCCTTATTGAATACTACTGTTTGCAAAG  500

seq1  ATTGTTCTAAAATCAGTATGATTTCTGGAATGAAGGCATTTCCAGCACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCTAAAATCAGTATGATTTCTGGAATGAAGGCATTTCCAGCACAG  550

seq1  GAAAAATACAACCGAGAAGGACACAGTTGAGGTACTGAGAGAATTTTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATACAACCGAGAAGGACACAGTTGAGGTACTGAGAGAATTTTCCA  600

seq1  TGTGCACCACCCCTCAGGAAATTTTGTGGCAAACCTACCATACCATTGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACCACCCCTCAGGAAATTTTGTGGCAAACCTACCATACCATTGAC  650

seq1  ATTCAAACAAATTCAACCTCAAATACCAGATCAAATTTAAGTTGGTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAACAAATTCAACCTCAAATACCAGATCAAATTTAAGTTGGTGAAA  700

seq1  TTTTGAGGGAGGCAGGGTTAGCTGTCTGTGTTCATTGTCTTGGAAGGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGGGAGGCAGGGTTAGCTGTCTGTGTTCATTGTCTTGGAAGGCAA  750

seq1  AGTCCTTTTGCCTTTAGAGGGCATACATGTAACTTACATAGTAGACCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTTTGCCTTTAGAGGGCATACATGTAACTTACATAGTAGACCTTG  800

seq1  GCAGTGGATATATACATCCCTGAATCTATACACCAGCAGATACAGCCAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGGATATATACATCCCTGAATCTATACACCAGCAGATACAGCCAAT  850

seq1  CACAGATCAAAATACTAGAAAAAAAATACATATATCTTGAACATATAGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATCAAAATACTAGAAAAAAAATACATATATCTTGAACATATAGAC  900

seq1  TTCTTTTCTTGCCACAAGTCCATAAATAATTTGGTAAATAATACATATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCTTGCCACAAGTCCATAAATAATTTGGTAAATAATACATATTT  950

seq1  ACTTTACA-TTATGTATTATAAGTAACCCAGAGGTGATTTAGGGTATGGG  999
      |||||||| |||||||||||||||||||||||||||||||| ||||||||
seq2  ACTTTACATTTATGTATTATAAGTAACCCAGAGGTGATTTA-GGTATGGG  999

seq1  GATGGGTATGCCTATTATTTATAAATATT-ATGTCTTCATATATGAGGTA  1048
      ||||||||||||||||| ||||||||||| ||| |||||||||||| |||
seq2  GATGGGTATGCCTATTA-TTATAAATATTAATGCCTTCATATATGAAGTA  1048

seq1  TTTGAGCAT-CCTCAAATTTAGGTATCCTAG-AGGATCCC-AGAGCCAAC  1095
       |||||||| ||||||||||||||||||||| ||||||||  ||    ||
seq2  -TTGAGCATCCCTCAAATTTAGGTATCCTAGAAGGATCCCGTGATGTCAC  1097

seq1  ACCCCCTAGAAC-ACTAGGGGGTAACCATA----ACTCTGTACA--AGTA  1138
       | ||||| |||  ||||||||  ||||||     |||||||||  ||||
seq2  TCACCCTAAAACGTCTAGGGGGATACCATATAACTCTCTGTACAACAGTA  1147

seq1  CGGAG-GTGGGG  1149
      ||||| ||||||
seq2  CGGAGAGTGGGG  1159