BAC Information

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BAC

Clone NameB6Ng01-264J05
Chromosome9 (Build37)
Map Location 78,859,529 - 78,860,647
singlet/doubletsinglet
Overlap genenone
Upstream geneGcm1, LOC666353, Fbxo9, Ick, C920006O11Rik, Gsta4, LOC100041074, Gsta1, LOC666367, LOC100042295, LOC666373, LOC100042314, Omt2a, EG666383, Omt2b, Gsta2, Dppa5, 2410146L05Rik, LOC666408, LOC100042356, LOC666419, E330016A19Rik, Mto1, Eef1a1, Slc17a5, Cd109, LOC384957, EG666456
Downstream geneLOC436085, LOC235509, LOC666479, Col12a1, Cox7a2, Tmem30a, Filip1, LOC100041218, LOC666490
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264J05.bB6Ng01-264J05.g
ACCGA068446GA068447
length1,113733
definitionB6Ng01-264J05.b B6Ng01-264J05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaaaaatattataaaatgatgttaaacattttgttatatacat
tttcaagtaagcaatataaattcaagttttgtgcaccccctacactcacc
aactactgccaccacattgaaatccagatgtggtgttgaataaattttcc
actgagttagaccccatgatatacagggatctcttttctgtcaaactata
actgaaattctacaccagatgattgctaaagccctcaaggctctgagatt
ttgacataaaggacatttgagaccccatgaaaacaaaaataatcataaac
caaattttaaaaaattccaccaaagctgtgttcactgtgagaatacaaaa
tggttagaaaaaaaaatgaagtgcatattattctgacactccagactttc
ttttaaagccagattgaagttatgcactattgaaagagtggaaaaagcca
ttaaagttgatttttgtcaactttatgtttagccacagatgttagcatga
cacttaataatttctggtttatggaggaaattagaagagaatcctaacaa
tgcaagtgatatatagcctgcctgtaaaattacttcgtgtttcacttgaa
aacaatgtcaagaatgactttgatacatgcaagtattctacaatagatta
tctagtttagtagcctgactggtagcttagaagtttttatttttaaacca
aaattattaaaacgtgtttttattgcctgcaaggaagttatgtacccaac
ttgagattattcttctatgttcatcccctacatttattttgagtttagat
acaaataagggaggatacatagtaactcttaaatgtatgtagagggtgtg
ttcacctaggcaagatgctttccttttttttctttaatctttattttatg
agtattgggtacttttcttgcatgcatgcctttgtgaggatgcttgggat
cttggaagttataaccattgtaagctgccatgtggtactgggaaattgaa
ccctggtccttggagatcagtcatgctccttaagaacaaagacatcactc
caccccacaagtgccttcatgatcatcgaaaagtagactatttctactct
acatgaaatatct
gaattctctactgaggtaactcgaatggccaagaagcatctaaggaaaca
ttcaacatccttagtcatcagggaaatgcaaaccaaaattccacctcaca
ccagtcagaatagctaagatcaaaaactcaggtgacagcaggtgctggta
aggacgcgaagaaagaggaacactcctccattgctggtgggattgcaagc
tggtacaaccactctggaaatcagtttggcagttcctcagaaaattggac
atagtactacttgaggacccagctataccactcccggcatatacccaaaa
gatgttccaacatataacaaggacacatgctccactatgttcatagcagc
cttatttataatagccagaatctggaaagaactgagatgtccctcaacag
aggaatggatacagaaaacatggtacatttacacagaagagtactacgca
actattaaaaacaatgacttcatgaaatccttaggcaaatggatgaaact
agatcatcttaagtgaggtaacccagtcacaaaagaacatacatgttatg
tactcactgataagtggatgttaggaaaaaatgctctggaatacccacaa
tacaactcatagaccatatgaagctcaagaagaaggaaagccaaagtgtg
aatgctttagatttacttagaagggggaacgaagcaatcatgggaggtag
agggtaggaggggcttaggaggaatagaagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_78859529_78860647
seq2: B6Ng01-264J05.b_47_1159 (reverse)

seq1  AGATATTTTCATGTAGAGTAGGAAAATAGTTTTTCCTTTTTCGATGATCA  50
      ||||| |||||||||||||||  ||||||| |     |||||||||||||
seq2  AGATA-TTTCATGTAGAGTAG--AAATAGTCT---ACTTTTCGATGATCA  44

seq1  TGAAAGCACTTTGTGGGGTTGGAGTGATGTCTTTGTTCTTAA-GAGCATG  99
      |||| |||| |||||||| ||||||||||||||||||||||| |||||||
seq2  TGAAGGCAC-TTGTGGGG-TGGAGTGATGTCTTTGTTCTTAAGGAGCATG  92

seq1  ACTGATCTTCCAAAGGACCAGGGTTCAA-TTCCCAGTACCCACATGGCAG  148
      ||||||||  | |||||||||||||||| ||||||||| |||||||||||
seq2  ACTGATCT--CCAAGGACCAGGGTTCAATTTCCCAGTA-CCACATGGCAG  139

seq1  CTTACAATGGTTTATAAC-TCCAAGAT-CCAAGCATCCTCACAAAGGCAT  196
      |||||||||| ||||||| |||||||| ||||||||||||||||||||||
seq2  CTTACAATGG-TTATAACTTCCAAGATCCCAAGCATCCTCACAAAGGCAT  188

seq1  GCATGCAAGAAAAGTA-CCAATACTCATAAAATAAAGATTAAAG-AAAAA  244
      |||||||||||||||| ||||||||||||||||||||||||||| |||||
seq2  GCATGCAAGAAAAGTACCCAATACTCATAAAATAAAGATTAAAGAAAAAA  238

seq1  AAGGAAAGCATCTTGCCTAGGTGAACACACCCTCTACATACATTTAAGAG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGCATCTTGCCTAGGTGAACACACCCTCTACATACATTTAAGAG  288

seq1  TTACTATGTATCCTCCCTTATTTGTATCTAAACTCAAAATAAATGTAGGG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATGTATCCTCCCTTATTTGTATCTAAACTCAAAATAAATGTAGGG  338

seq1  GATGAACATAGAAGAATAATCTCAAGTTGGGTACATAACTTCCTTGCAGG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAACATAGAAGAATAATCTCAAGTTGGGTACATAACTTCCTTGCAGG  388

seq1  CAATAAAAACACGTTTTAATAATTTTGGTTTAAAAATAAAAACTTCTAAG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAAACACGTTTTAATAATTTTGGTTTAAAAATAAAAACTTCTAAG  438

seq1  CTACCAGTCAGGCTACTAAACTAGATAATCTATTGTAGAATACTTGCATG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAGTCAGGCTACTAAACTAGATAATCTATTGTAGAATACTTGCATG  488

seq1  TATCAAAGTCATTCTTGACATTGTTTTCAAGTGAAACACGAAGTAATTTT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAGTCATTCTTGACATTGTTTTCAAGTGAAACACGAAGTAATTTT  538

seq1  ACAGGCAGGCTATATATCACTTGCATTGTTAGGATTCTCTTCTAATTTCC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAGGCTATATATCACTTGCATTGTTAGGATTCTCTTCTAATTTCC  588

seq1  TCCATAAACCAGAAATTATTAAGTGTCATGCTAACATCTGTGGCTAAACA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAAACCAGAAATTATTAAGTGTCATGCTAACATCTGTGGCTAAACA  638

seq1  TAAAGTTGACAAAAATCAACTTTAATGGCTTTTTCCACTCTTTCAATAGT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTGACAAAAATCAACTTTAATGGCTTTTTCCACTCTTTCAATAGT  688

seq1  GCATAACTTCAATCTGGCTTTAAAAGAAAGTCTGGAGTGTCAGAATAATA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAACTTCAATCTGGCTTTAAAAGAAAGTCTGGAGTGTCAGAATAATA  738

seq1  TGCACTTCATTTTTTTTTCTAACCATTTTGTATTCTCACAGTGAACACAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTTCATTTTTTTTTCTAACCATTTTGTATTCTCACAGTGAACACAG  788

seq1  CTTTGGTGGAATTTTTTAAAATTTGGTTTATGATTATTTTTGTTTTCATG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTGGAATTTTTTAAAATTTGGTTTATGATTATTTTTGTTTTCATG  838

seq1  GGGTCTCAAATGTCCTTTATGTCAAAATCTCAGAGCCTTGAGGGCTTTAG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTCAAATGTCCTTTATGTCAAAATCTCAGAGCCTTGAGGGCTTTAG  888

seq1  CAATCATCTGGTGTAGAATTTCAGTTATAGTTTGACAGAAAAGAGATCCC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATCTGGTGTAGAATTTCAGTTATAGTTTGACAGAAAAGAGATCCC  938

seq1  TGTATATCATGGGGTCTAACTCAGTGGAAAATTTATTCAACACCACATCT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATCATGGGGTCTAACTCAGTGGAAAATTTATTCAACACCACATCT  988

seq1  GGATTTCAATGTGGTGGCAGTAGTTGGTGAGTGTAGGGGGTGCACAAAAC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCAATGTGGTGGCAGTAGTTGGTGAGTGTAGGGGGTGCACAAAAC  1038

seq1  TTGAATTTATATTGCTTACTTGAAAATGTATATAACAAAATGTTTAACAT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTTATATTGCTTACTTGAAAATGTATATAACAAAATGTTTAACAT  1088

seq1  CATTTTATAATATTTTTTAGAATTC  1119
      |||||||||||||||||||||||||
seq2  CATTTTATAATATTTTTTAGAATTC  1113