This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
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Search Result
BAC
Clone Name
B6Ng01-264O19
Chromosome
9 (Build37)
Map Location
81,541,707 - 81,687,256
singlet/doublet
doublet
Overlap gene
LOC671392
Upstream gene
EG666534
,
LOC100039038
,
Htr1b
Downstream gene
4930486G11Rik
,
LOC100039085
Link
Open Mouse BAC browser
Click to get alignment info.
name
EG666534
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:666534
MGI:3644503
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins
pseudo
: _no_value
name
LOC100039038
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100039038
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
name
Htr1b
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:15551
MGI:96274
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC671392
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:671392
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 246 ESTs, 17 Proteins
name
4930486G11Rik
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:75033
MGI:1922283
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC100039085
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100039085
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins
pseudo
: _no_value
name
LOC100039038
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149260104
GeneID:100039038
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
product
: hypothetical protein LOC100039038
transcript_id
: XM_001472137.1
name
Htr1b
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:6754257
GeneID:15551
MGI:96274
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: 5-hydroxytryptamine (serotonin) receptor 1B
transcript_id
: NM_010482.1
name
LOC671392
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149260100
GeneID:671392
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 245 ESTs, 17 Proteins
product
: similar to protein phosphatase 2A inhibitor-2 I-2PP2A, transcript variant 1
transcript_id
: XM_001472004.1
name
LOC671392
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149260102
GeneID:671392
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 170 ESTs, 1 Protein
product
: similar to protein phosphatase 2A inhibitor-2 I-2PP2A, transcript variant 2
transcript_id
: XM_001472036.1
name
4930486G11Rik
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:141803039
GeneID:75033
MGI:1922283
definition
exception
: mismatches in transcription
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: RIKEN cDNA 4930486G11 gene
transcript_id
: NM_175213.3
name
LOC100039038
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149260105
GeneID:100039038
definition
codon_start
: 1
product
: hypothetical protein
protein_id
: XP_001472187.1
name
Htr1b
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:6754258
CCDS:CCDS23370.1
GeneID:15551
MGI:96274
definition
GO_component
: GO:0016020 - membrane [Evidence IEA]
GO_function
: GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]
GO_process
: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
codon_start
: 1
note
: 5-HT1B receptor; 5-HT<1B> receptor
product
: 5-hydroxytryptamine (serotonin) receptor 1B
protein_id
: NP_034612.1
name
LOC671392
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149260101
GeneID:671392
definition
codon_start
: 1
product
: similar to protein phosphatase 2A inhibitor-2 I-2PP2A isoform 1
protein_id
: XP_001472054.1
name
LOC671392
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149260103
GeneID:671392
definition
codon_start
: 1
product
: similar to protein phosphatase 2A inhibitor-2 I-2PP2A isoform 2
protein_id
: XP_001472086.1
name
4930486G11Rik
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:30424840
CCDS:CCDS23371.1
GeneID:75033
MGI:1922283
definition
GO_component
: GO:0005575 - cellular_component [Evidence ND]
GO_function
: GO:0003674 - molecular_function [Evidence ND]
GO_process
: GO:0008150 - biological_process [Evidence ND]
codon_start
: 1
product
: hypothetical protein LOC75033
protein_id
: NP_780422.1
name
EG666534
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:666534
definition
number
: 3
pseudo
: _no_value
name
EG666534
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:666534
definition
number
: 2
pseudo
: _no_value
name
EG666534
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:666534
definition
number
: 1
pseudo
: _no_value
name
LOC100039085
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039085
definition
number
: 4
pseudo
: _no_value
name
LOC100039085
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039085
definition
number
: 3
pseudo
: _no_value
name
LOC100039085
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039085
definition
number
: 2
pseudo
: _no_value
name
LOC100039085
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039085
definition
number
: 1
pseudo
: _no_value
clone name
MSMg01-131B18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-517K21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-464A12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-069P04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-536O21
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-161A10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-428C10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-327M05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-419J12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-074I13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-152C09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-271D03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-131I07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-095D13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-276J15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-116H14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-320J24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-434D20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-316I13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-396E05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-478L11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-487N04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-375M12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-074M13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-490G14
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-316K23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-142E18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-176O17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-142E12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-411D22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-061B12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-116O21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-184I07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-060D06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-158P14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-522F17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-184C07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-194A17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-357L19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-544O17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-529M01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-106D08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-210H19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-516C22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-187N04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-489F12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-445K17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-319D18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-402F20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-489C14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-218F24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-515H06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-492G14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-499B07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-206P15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-057O06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-374K24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-507B13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-148L01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-112N17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-270H02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-432D23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-191H10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-109M22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-421F22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-389N19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-466I09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-478F16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-450C15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-535E14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-482N14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-141I15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-461L05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-290J21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-408H18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-478I11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-321K23
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-196L14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-350G05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-519I20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-322A22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-536L08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-143P22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-372J12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-295N14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-118J08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-332F06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-128K23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-163G15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-182J11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-181L02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-152K16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-182C09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-298F04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-094G18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-095J19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-093B03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-325O10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-334O12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-314I22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-237N11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-294H08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-348L14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-098P15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-201P09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-300J19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-130J01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-124M02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-047M10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-057B01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-232P23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-316P09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-060M01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-231M17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-162E04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-082G10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-308H08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-122K04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-037I19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-032N11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-248E17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-129L11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-208O08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-297G12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-182M23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-011A01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-065L05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-160O21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-332G06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-224N21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-229F19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-180O10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-337C03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-202B08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-347H06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-023G13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-183I10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-136F20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-293N10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-213K14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-133N16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-115L20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-307O11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-348J17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-291I22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-334J06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-264O19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-155D18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-111J09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-201G23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-038H22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-197P07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-200P13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-087K05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-189H20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-058K09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-185O03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-246G15
singlet/doublet
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doublet
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doublet
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B6Ng01-089H15
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B6Ng01-112D13
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doublet
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B6Ng01-263M21
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doublet
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B6Ng01-046I16
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doublet
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B6Ng01-039E05
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B6Ng01-048H24
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doublet
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doublet
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B6Ng01-305C10
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doublet
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B6Ng01-091G19
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B6Ng01-008C14
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doublet
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B6Ng01-145E09
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B6Ng01-039G19
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B6Ng01-129C12
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B6Ng01-057H15
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B6Ng01-218O05
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B6Ng01-007F21
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B6Ng01-322B05
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