cagggtaggtagccttatttttctctgtctcttgaagacattccagaact
attactggagcataagggctggaaactgttgctgaccatttgtcattgtt
tcaggccaggtggcagagcagttgctgactagctgcctgaagcctaggtt
tttaggcctaatctcctgaactgtcaatttgaaccctgtcatggagtcag
cctgtcacatcaacacaaaataaactatggagtcaatgaaattcccatca
aaagtatattttctaaacacaaagaaattaaattagaaataatgaggaga
tttgggaaatccaaaatattttaaaagctaaacatgtttatccataatac
ctggataaaattatgaaattatgaaaacttgaacattttctgaagtaaat
tttcatgaacaatttgtagggtaaatacaaaagtatatggaatgtgcagt
atattcattcattctcccagtaccacaaaagagaaggaggaggaggaaag
gaggaggaggagga

gaattccacagaggcagctggaccccagacttcattgccagcagtggaag
ggaggcaggtgtaaatggaaggccgggggaaagggcaggagagtgggtaa
agccttgggacccccctccaagaggtatcatagaccacactgagggggca
tggctgccatctctaggaggctgagtaattagtgaatggagaaaagcttt
attagtcactgctgagaagaagcacaacaggtattatccaatcagctaat
ggagggcttcatggttttcaagaggctgctataaggagggaattttgttc
tcttctctctttgcccccagaagactcatggtgctgagagcagacggtga
gggggaagaggatgggcccttattcttgagtcacttagctgccagggtac
gtttttggggctctgggaagcacagcatagtcagctgcctgttggtagga
ggtaagggtcagattagggaggcgatgctacaaatgactgagggcctagt
cagaagtcataactgaaaatgactaagtgatgaaggaagagtcctggggg
ctagagctgactcaggactgatgctggctggaggctctgctctcccacct
gactcacctgctcctgaaagaggaaggctgcctgaaggaggaggtgagtg
atccagaggatgttgttaaagaagccatgtttcttatgctggggaagctt
tgggggtgcagagtgaaagaaaggccccttctggttggagatgcagctca
atggtagaacatttatctaggatgcccaaggccctggatttgatccccag
cattgaacaacacctctccccggccccccaaaaaaccccataagaaacca
cacaggacacttttctctagtagtaattttcccaataataatgtgagagg
atagggttcttccttgagatgtaccatcaagagatggggcgaagatgggg
ttcacaagacatgtgcagcagaagaagtggagatgctagttaagggtacc
caagtgttgagttggtctgcttgcctatctaagctaagctagggttctca
gactagagtcttccacggtaagaccctaaatgattttctggattggttaa
ta

seq1: chr9_27012045_27013136
seq2: B6Ng01-271D11.g_65_1166

seq1  GAATTCCACAGAGGCAGCTGGACCCCAGACTTCATTGCCAGCAGTGGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGAGGCAGCTGGACCCCAGACTTCATTGCCAGCAGTGGAAG  50

seq1  GGAGGCAGGTGTAAATGGAAGGCCGGGGGAAAGGGCAGGAGAGTGGGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAGGTGTAAATGGAAGGCCGGGGGAAAGGGCAGGAGAGTGGGTAA  100

seq1  AGCCTTGGGACCCCCCTCCAAGAGGTATCATAGACCACACTGAGGGGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGGGACCCCCCTCCAAGAGGTATCATAGACCACACTGAGGGGGCA  150

seq1  TGGCTGCCATCTCTAGGAGGCTGAGTAATTAGTGAATGGAGAAAAGCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCCATCTCTAGGAGGCTGAGTAATTAGTGAATGGAGAAAAGCTTT  200

seq1  ATTAGTCACTGCTGAGAAGAAGCACAACAGGTATTATCCAATCAGCTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTCACTGCTGAGAAGAAGCACAACAGGTATTATCCAATCAGCTAAT  250

seq1  GGAGGGCTTCATGGTTTTCAAGAGGCTGCTATAAGGAGGGAATTTTGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGCTTCATGGTTTTCAAGAGGCTGCTATAAGGAGGGAATTTTGTTC  300

seq1  TCTTCTCTCTTTGCCCCCAGAAGACTCATGGTGCTGAGAGCAGACGGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTCTTTGCCCCCAGAAGACTCATGGTGCTGAGAGCAGACGGTGA  350

seq1  GGGGGAAGAGGATGGGCCCTTATTCTTGAGTCACTTAGCTGCCAGGGTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAAGAGGATGGGCCCTTATTCTTGAGTCACTTAGCTGCCAGGGTAC  400

seq1  GTTTTTGGGGCTCTGGGAAGCACAGCATAGTCAGCTGCCTGTTGGTAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGGGGCTCTGGGAAGCACAGCATAGTCAGCTGCCTGTTGGTAGGA  450

seq1  GGTAAGGGTCAGATTAGGGAGGCGATGCTACAAATGACTGAGGGCCTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGGGTCAGATTAGGGAGGCGATGCTACAAATGACTGAGGGCCTAGT  500

seq1  CAGAAGTCATAACTGAAAATGACTAAGTGATGAAGGAAGAGTCCTGGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTCATAACTGAAAATGACTAAGTGATGAAGGAAGAGTCCTGGGGG  550

seq1  CTAGAGCTGACTCAGGACTGATGCTGGCTGGAGGCTCTGCTCTCCCACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGCTGACTCAGGACTGATGCTGGCTGGAGGCTCTGCTCTCCCACCT  600

seq1  GACTCACCTGCTCCTGAAAGAGGAAGGCTGCCTGAAGGAGGAGGTGAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCACCTGCTCCTGAAAGAGGAAGGCTGCCTGAAGGAGGAGGTGAGTG  650

seq1  ATCCAGAGGATGTTGTTAAAGAAGCCATGTTTCTTATGCT-GGGAAGCTT  699
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATCCAGAGGATGTTGTTAAAGAAGCCATGTTTCTTATGCTGGGGAAGCTT  700

seq1  TGGGGGTGCAGAGTGAAAGAAAGGCCCCTTCTGGTTGGAGATGCAGCTCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGTGCAGAGTGAAAGAAAGGCCCCTTCTGGTTGGAGATGCAGCTCA  750

seq1  ATGGTAGAACATTTATCTAGGATGCCCAAGGCCCTGGATTTGATCCCCAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGAACATTTATCTAGGATGCCCAAGGCCCTGGATTTGATCCCCAG  800

seq1  CATTGAACAACACCTCTCCCC-GCCCCCCAAAAAACCCCATAAGAAACCA  848
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CATTGAACAACACCTCTCCCCGGCCCCCCAAAAAACCCCATAAGAAACCA  850

seq1  CACAGGACAC-TTTCTCTAGTAGTAATTTT-CCAATAATAATGTGAGAGG  896
      |||||||||| ||||||||||||||||||| |||||||||||||||||||
seq2  CACAGGACACTTTTCTCTAGTAGTAATTTTCCCAATAATAATGTGAGAGG  900

seq1  ATAGGG-TCTTCCTTGAGATGTACCATCAGGAGATGGGGCGAGGATGGG-  944
      |||||| |||||||||||||||||||||| |||||||||||| |||||| 
seq2  ATAGGGTTCTTCCTTGAGATGTACCATCAAGAGATGGGGCGAAGATGGGG  950

seq1  -TCAC-AGACATGTGCAGCAGAAGGAGTGGAGATGCTAGTTAAGGGTACC  992
       |||| |||||||||||||||||| |||||||||||||||||||||||||
seq2  TTCACAAGACATGTGCAGCAGAAGAAGTGGAGATGCTAGTTAAGGGTACC  1000

seq1  CAGGTGTTGAGGTTTGGTCTTGCTGTCTATCTAAGCTAAGTAAGGGTTCT  1042
      || ||||||||  |||||||   || ||||||||||||||  ||||||||
seq2  CAAGTGTTGAG--TTGGTCTGCTTGCCTATCTAAGCTAAGCTAGGGTTCT  1048

seq1  CAAGACCTAGAGTCTT-CACG--TAGACCC-AAATGA-TTTCT-GATTGG  1086
      | ||| |||||||||| ||||   |||||| |||||| ||||| ||||||
seq2  C-AGA-CTAGAGTCTTCCACGGTAAGACCCTAAATGATTTTCTGGATTGG  1096

seq1  TAAATA  1092
      | ||||
seq2  TTAATA  1102