BAC Information

Click to search

BAC

Clone NameB6Ng01-284K17
Chromosome9 (Build37)
Map Location 38,065,851 - 38,066,593
singlet/doubletsinglet
Overlap genenone
Upstream geneCcdc15, Hepacam, Robo4, Robo3, BC024479, Esam1, Vsig2, Nrgn, Spa17, Siae, Tbrg1, Panx3, LOC666881, EG627798, Olfr160, Olfr151, Olfr874, Olfr875, Olfr876, Olfr877, Olfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143
Downstream geneOlfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933, Olfr934, Olfr935, Olfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1, Olfr27, Olfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284K17.bB6Ng01-284K17.g
ACCGA083313GA083314
length1,1781,188
definitionB6Ng01-284K17.b B6Ng01-284K17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctttaaagaagaagaaatattcagttttcccagcagtatttg
ttgtaaagaattgtgttggaattttgatgggcttaacaataatctgtaga
ctgattttggtaagatgacagactgattttggtaagatgacatttttcac
tcagctaattctactaaaccatgaacatgtgagatctttcttctgttatc
ttcttcaatttctttcttcaaagtcttgaagtgttatcacttatcataca
agtgtttacttacttgtttgtttagagttactccaagatggcatttgata
ctactgtgaaaggtgttgtttgtctaaatttttttctcagtccaattatc
atttgtatataggaaggctactgctacttttgtatatagctagatactct
ttcttttgtcaaactttttctttattagatattttctttatatttcaaat
gcaatcctgaaagttccctatacactgtcccctacccacccactcccgct
tcttggccctggcattcacttgtactggggcatataaagtttgcaatacc
aaggggcctctcttcccagtgatggccagctaggccatcttctgctacat
atgcagctagagacatgagctctgtgggtactggttatttcatattgttg
ttccacatatagggttgcagacctcttcagctccttggtgctttttctag
cttctccattgggggccctgtgttccatcttataggtgactgtgagcatc
tagccactttgctgaaagtgcttatcatgcttaggaattccctggttcat
atatactatcacatcattggaaagtaatgatacccttttccctttccaat
ttgtacacccctgtttgcctattactctagataagacctcaagttctata
actaataggatggaaaaaatagacagctgtaagtacgcatgcttacttat
caggcaaagtcagctgatagggcctaaaggaattaaaccaggtcatttgg
aggggcacagcaaagctttaagttttgttaactttatgaaacaatcagag
ccttttaatttcttttttcagaaacagaataatagtgaccgatggccaag
ataaaatacagtgcatgccataaatatatagtatagttttgtaacatatt
cacggctttttataaagaataatgtcta
gaattccaggaaaacataaccaaataggtgtaggaattaaaaaaaaaatc
caagatctagaaaaggaagtagaaacaataaagaaaacccaaagggatac
aactctggagatagtaaccttaggaaagaaatcaggaaacatagattcga
gcatcagcaacagaatacaagagatggaagagagaaactaaggtgcagaa
gattccatagaaaacatgaacaaaacaatcaaagaaaatgcaaaatacaa
aaatatcctacctcgaaacatccaggaaatccaggacacaatgagaatac
caaacctactgataataggagtagatgagaatgaagattttcaacttaaa
gggccagtaaatatcttcaacaaaattatagaagaaaacttccctaacct
aaagaaagagatgcccgtgaacatacaagaagcctacaggacaccaaata
gactgtagcagaaaaaaaaattccaaaagctctagagcaaaaggaagcaa
atacacccaagaggagtaaacaggagtaaataatcaaactcaggaaagaa
atcaaccaagtggaaaggaaaagaactatacaaataatcaaccaaactag
gagctggttctttgagaaaatcaacaagatagataaacccttagccagac
taactagagggcacagggacagtatcctaattaacaaaatcagatatgaa
aagggagacataacagaatacgaggaaattcaaaacatcatcagatccta
ctacaaaagtctatactcaacaaaactgcaaaatctggatgaaatggaca
aaatcctagaaagataccaggtaccaaaattaaatcaggatcagattaat
gatctaaacagccccatatcccctaaagaaatagaaaggaatcattaaga
gtctcccaacccaaagaaaagcccagggaccaatgcagagttctattaga
ccttcaaagaaaacctaattctaattctctgaaactaattccacaaaagg
aggaacagaggtactctaccaaagtgattcttattgaagcacaattactc
tgattcattaaacacataaagacccaccaaaggaaagaacttgaaacgag
ttcctatggaaatattctatgaatgaaatccaaaatactctaataatggc
tcaacttaaaagatattccaaggatcacatctccagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_38065851_38066593
seq2: B6Ng01-284K17.b_472_1222

seq1  GATATTTTCTTTATATTTCAAATGCAATCCTGAAAGTTCCCTATACACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTTCTTTATATTTCAAATGCAATCCTGAAAGTTCCCTATACACTG  50

seq1  TCCCCTACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCACTTGTACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCACTTGTACTG  100

seq1  GGGCATATAAAGTTTGCAATACCAAGGGGCCTCTCTTCCCAGTGATGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATATAAAGTTTGCAATACCAAGGGGCCTCTCTTCCCAGTGATGGCC  150

seq1  AGCTAGGCCATCTTCTGCTACATATGCAGCTAGAGACATGAGCTCTGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGGCCATCTTCTGCTACATATGCAGCTAGAGACATGAGCTCTGTGG  200

seq1  GTACTGGTTATTTCATATTGTTGTTCCACATATAGGGTTGCAGACCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGTTATTTCATATTGTTGTTCCACATATAGGGTTGCAGACCTCTT  250

seq1  CAGCTCCTTGGTGCTTTTTCTAGCTTCTCCATTGGGGGCCCTGTGTTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCTTGGTGCTTTTTCTAGCTTCTCCATTGGGGGCCCTGTGTTCCA  300

seq1  TCTTATAGGTGACTGTGAGCATCTAGCCACTTTGCTGAAAGTGCTTATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAGGTGACTGTGAGCATCTAGCCACTTTGCTGAAAGTGCTTATCA  350

seq1  TGCTTAGGAATTCCCTGGTTCATATATACTATCACATCATTGGAAAGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAGGAATTCCCTGGTTCATATATACTATCACATCATTGGAAAGTAA  400

seq1  TGATACCCTTTTCCCTTTCCAATTTGTACACCCCTGTTTGCCTATTACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACCCTTTTCCCTTTCCAATTTGTACACCCCTGTTTGCCTATTACTC  450

seq1  TAGATAAGACCTCAAGTTCTATAACTAATAGGATGGAAAAAATAGACAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAAGACCTCAAGTTCTATAACTAATAGGATGGAAAAAATAGACAGC  500

seq1  TGTAAGTACGCATGCTTACTTATCAGGGCAAGGTCAGCTGATAGGGCCTA  550
      ||||||||||||||||||||||||| ||||| ||||||||||||||||||
seq2  TGTAAGTACGCATGCTTACTTATCA-GGCAAAGTCAGCTGATAGGGCCTA  549

seq1  AAGGAATTAAACCAGGTCATTTGGAGGGGCCACAGCAAAGC-TTAAGTTT  599
      ||||||||||||||||||||||||||||| ||||||||||| ||||||||
seq2  AAGGAATTAAACCAGGTCATTTGGAGGGG-CACAGCAAAGCTTTAAGTTT  598

seq1  TGGTAACTTTATTGAAACCAATCAGAG-CTTTTA--TTCCTTTTTCAGAA  646
      || |||||||| ||||| ||||||||| ||||||  ||| ||||||||||
seq2  TGTTAACTTTA-TGAAA-CAATCAGAGCCTTTTAATTTCTTTTTTCAGAA  646

seq1  ACAGAAT-ATAGTGACCG-TTGCCAAGAT-AAATACAGTTGCAGTTGCCA  693
      ||||||| |||||||||| | |||||||| |||||||| ||||  |||||
seq2  ACAGAATAATAGTGACCGATGGCCAAGATAAAATACAG-TGCA--TGCCA  693

seq1  TA---ATATAAT-GATGTTTGTAAACTATACA---GTTTTTAT-AAGATT  735
      ||   ||||| |  |  |||||||  ||| ||    ||||||| |||| |
seq2  TAAATATATAGTATAGTTTTGTAACATATTCACGGCTTTTTATAAAGAAT  743

seq1  AATGTCTA  743
      ||||||||
seq2  AATGTCTA  751