BAC Information

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BAC

Clone NameB6Ng01-287J05
Chromosome9 (Build37)
Map Location 19,337,999 - 19,338,347
singlet/doubletsinglet
Overlap geneOlfr852-ps1
Upstream geneMuc16, Olfr24, Olfr828, Olfr829, Olfr830, Olfr831-ps1, Olfr832, GA_x5J8B7W6RL5-13870817-13871726, Olfr834, Olfr835, Olfr836, Olfr837, GA_x5J8B7W6RL5-13695863-13696754, Olfr839-ps1, GA_x5J8B7W6RL5-13645512-13646298, Olfr841-ps1, Olfr842-ps1, Olfr843, Olfr845, Olfr1522-ps1, Olfr846, LOC665697, Olfr847, GA_x5J8B7W6RL5-13451244-13452122, Olfr849, Olfr850, Olfr851
Downstream geneOlfr853, Olfr854, Olfr855, Zfp75, EG624341, LOC665751, Olfr857, Olfr858-ps1, Olfr58, Olfr859, Olfr860, GA_x5J8B7W6RL5-13004417-13003354, Olfr862, Olfr77, EG665823, Olfr863-ps1, Olfr864-ps1, Olfr865-ps1, Olfr866, Olfr867, Olfr868, Olfr869, Olfr870, Olfr871, Olfr872, Olfr39, Olfr873, Olfr18, Zfp560, 4921534A09Rik, EG624824, Zfp26, Zfp426, 5730601F06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287J05.bB6Ng01-287J05.g
ACCGA085462GA085463
length982350
definitionB6Ng01-287J05.b B6Ng01-287J05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgagaatgtagagaaagaggaacactcctccattgttggtt
ggattgcaagcttgtacaaccactctgaaaatcagtctggcggttcctca
gaaaattgggcatagtactaccggaggatccagcaatacctctcctgtgc
gtatatcaagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgagtaacccaatcacaaag
gaactcacacaatatgtactctctgataagtggatattagtccaaaactt
aggatacccaagatataagatacaatttgctaaacgcatgaaactctaga
agaatgaagaccaaagtgtggacactgtgccccttcttagaattgggaac
aaaacacccatggaaggaattacagagacaaagtttggagctgtgacaaa
aggatggaccatctagagactgccacatccagggatccaccccagaatca
gcttccaaactctgacaccattgcatacactagcaagattttgctgaaag
gactcagatatagctgtctcttgtgagactattctggggcctagcaaata
cagaagtggatgctcacagtcagctaatggatggatcacaggctcccaat
ggagagctagagaagtacctatgagctaaagg
ttctctgtctttcctattgctttttaaatgcatggccttgtttaattatt
cataagatgttttatacacacacacacacacacacgcccgcgagcgcgca
tacatatatatatgacccacatgttgagaaagctttataattaccagcta
tgctggtattctaagaatggaagaaataattctaaagtaagagaaaataa
cctctaatataggtatatcacctaaagcacttgtttgttcttgatgagag
tgtaagaacatgcaagcttgataacctgaccacgctcacagaagtagtgg
agaatttcaagatatatatgtgtgtgagtgtgtgtgtgtgtgtgtgtgta

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_19337999_19338347
seq2: B6Ng01-287J05.g_73_421

seq1  TTCTCTGTCTTTCCTATTGCTTTTTAAATGCATGGCCTTGTTTAATTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTCTTTCCTATTGCTTTTTAAATGCATGGCCTTGTTTAATTATT  50

seq1  CATAAGATGTTTTATACACACACACACACACACACGCCCGCGAGCGCGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGATGTTTTATACACACACACACACACACACGCCCGCGAGCGCGCA  100

seq1  TACATATATATATGACCCACATGTTGAGAAAGCTTTATAATTACCAGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATATATATGACCCACATGTTGAGAAAGCTTTATAATTACCAGCTA  150

seq1  TGCTGGTATTCTAAGAATGGAAGAAATAATTCTAAAGTAAGAGAAAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTATTCTAAGAATGGAAGAAATAATTCTAAAGTAAGAGAAAATAA  200

seq1  CCTCTAATATAGGTATATCACCTAAAGCACTTGTTTGTTCTTGATGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAATATAGGTATATCACCTAAAGCACTTGTTTGTTCTTGATGAGAG  250

seq1  TGTAAGAACATGCAAGCTTGATAACCTGACCACGCTCACAGAAGTAGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGAACATGCAAGCTTGATAACCTGACCACGCTCACAGAAGTAGTGG  300

seq1  AGAATTTCAAGATATATATGTGTGTGAGTGTGTGTGTGTGTGTGTGTGT  349
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTCAAGATATATATGTGTGTGAGTGTGTGTGTGTGTGTGTGTGT  349