BAC Information

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BAC

Clone NameB6Ng01-306C02
Chromosome9 (Build37)
Map Location 92,587,620 - 92,588,496
singlet/doubletsinglet
Overlap geneLOC100039931
Upstream geneLOC331000, Plscr1, Plscr2, 1700057G04Rik, LOC666850, Plscr4, Plod2, LOC100039921
Downstream geneLOC100039944, LOC667009, LOC100040114, LOC674371
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306C02.bB6Ng01-306C02.g
ACCGA099246GA099247
length1,0151,116
definitionB6Ng01-306C02.b B6Ng01-306C02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgaccatcttgtgaaaacctacacaagagtctctgttcagag
gacccaggctccatctgtagctacccataaggatctttatgcaagaaaaa
gaaactcaaataagtctgtttaaaaaaaaatcagtaagtacttctcaacc
ttcctaatgctgcaaccctttagtacagttcctcattttgtgacgacccc
agaaccattaaaatatttttactgctacttcataactttcattttgttac
tattatgatttgtaatgtaaatatctgcattttcccatggccttaggcca
cctcagtgaaagggttgtttaacactctccaaagggatgatgacccacat
attaagagtcactgatctaaagaatcttaatataacttctgttagtttca
atgtgtctctgtttagtttctgtttccatgatctgtccattgatgaaagt
ggtgtgttgaagtctcccactattattgtgtgaggtgcaatgtgtgcttt
gagctttactaaagtgtctttaatgaatgtggctgcgcttgcatttggag
catagatgttcagaattgagagttcctcttgtaagattttaccttagatg
agtatgaagtgtccctccttgtctttttttgataactttgggttggaagt
cgactatgttcgatattagaatggctactccagcttgtttctttggacca
tttgcttggaaatttgttttccagcctttcactctgaggtagtgtctgtc
cttttccatgaggtgagtttcctgtaagcagcaaaaagttgagtcctgtt
tctgtagccagtctgaggaccatgatatagctctctcttgtgaggctatg
ccagtgcctgacaaatacagaagtgaatgctcacagacatttattgaatg
gaacacaggaccactaaagaaggagctatcgaaagtaaccaaaggagcta
aagggatcggcaacccaataggaggatcaacatatgaactacagtacccc
acagactgtgtctct

gaattctgtatttagctctatacaccactttttaatggagttatttaatt
tgttggtatttaatttccttgtattctttatacattttggatattaggcc
tgtgtcagatggagtgttggcgaatatcatttctcattctgtagactgca
gttttgttctactgatggtgttagaaccttagagaagttttcagtttcat
gacgtcccatttattaattgttgatcttagcccctaccctgttagtgttc
tgttcaggaagttgtctcatgtagcattgcactcaagggtatttcacact
ttctcctctattatatttagtgtatccagatttatgttgaggtctttaat
acttgtggacttgaattttgtgcaggatgataaatgtgtatctattttca
ttcttgtacacagagacatccaattagaccagcaccatttgttgaaaatg
cttttagtttttcatcgtatggttttagcttctttgtcaaaaatgagctt
tctctatgtatgtggatttatttctgggttttgaatctatttcactgatt
aacctgtctggttttcatgactactgctctgtaagatagcttgaaatcag
ggatggtgatacctctagaagtccttttattgtacaggattttcttagct
atcctgggttatttgtttttccatatgaagttgagaattgacctttcaag
gtctgtaaagaattgtgttggaattttgatgggaattgcattgagtctgt
agattgcttgtggtaagatgttaatcctaccaatctatgaaaacgggaaa
attttttccatattctgatatcttcctcaattcctttcttcaaagccttg
taattcttgtcatacatgtctttcacttacttggttagatttacactaag
ataatattttatattatttgtggctatttgtgaaaaacatttgttaccag
atttcttttcttcagaccattattgtttgtataaaagaagctaattattt
ttcactttacttaaatttgtatccagccactttgctaagaatattgtcag
ctctaggagaatctcaggtagattttggggtttacctgaatatcccatca
caactactctggtgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_92587620_92588496
seq2: B6Ng01-306C02.b_45_921

seq1  GAATTCACTGACCATCTTGTGAAAACCTACACAAGAGTCTCTGTTCAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGACCATCTTGTGAAAACCTACACAAGAGTCTCTGTTCAGAG  50

seq1  GACCCAGGCTCCATCTGTAGCTACCCATAAGGATCTTTATGCAAGAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGGCTCCATCTGTAGCTACCCATAAGGATCTTTATGCAAGAAAAA  100

seq1  GAAACTCAAATAAGTCTGTTTAAAAAAAAATCAGTAAGTACTTCTCAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCAAATAAGTCTGTTTAAAAAAAAATCAGTAAGTACTTCTCAACC  150

seq1  TTCCTAATGCTGCAACCCTTTAGTACAGTTCCTCATTTTGTGACGACCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAATGCTGCAACCCTTTAGTACAGTTCCTCATTTTGTGACGACCCC  200

seq1  AGAACCATTAAAATATTTTTACTGCTACTTCATAACTTTCATTTTGTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCATTAAAATATTTTTACTGCTACTTCATAACTTTCATTTTGTTAC  250

seq1  TATTATGATTTGTAATGTAAATATCTGCATTTTCCCATGGCCTTAGGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGATTTGTAATGTAAATATCTGCATTTTCCCATGGCCTTAGGCCA  300

seq1  CCTCAGTGAAAGGGTTGTTTAACACTCTCCAAAGGGATGATGACCCACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGTGAAAGGGTTGTTTAACACTCTCCAAAGGGATGATGACCCACAT  350

seq1  ATTAAGAGTCACTGATCTAAAGAATCTTAATATAACTTCTGTTAGTTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAGTCACTGATCTAAAGAATCTTAATATAACTTCTGTTAGTTTCA  400

seq1  ATGTGTCTCTGTTTAGTTTCTGTTTCCATGATCTGTCCATTGATGAAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCTCTGTTTAGTTTCTGTTTCCATGATCTGTCCATTGATGAAAGT  450

seq1  GGTGTGTTGAAGTCTCCCACTATTATTGTGTGAGGTGCAATGTGTGCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGTTGAAGTCTCCCACTATTATTGTGTGAGGTGCAATGTGTGCTTT  500

seq1  GAGCTTTACTAAAGTGTCTTTAATGAATGTGGCTGCGCTTGCATTTGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTTACTAAAGTGTCTTTAATGAATGTGGCTGCGCTTGCATTTGGAG  550

seq1  CATAGATGTTCAGAATTGAGAGTTCCTCTTGTAAGATTTTACCTTAGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGATGTTCAGAATTGAGAGTTCCTCTTGTAAGATTTTACCTTAGATG  600

seq1  AGTATGAAGTGTCCCTCCTTGTCTTTTTTTGATAACTTTGGGTTGGAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGAAGTGTCCCTCCTTGTCTTTTTTTGATAACTTTGGGTTGGAAGT  650

seq1  CGACTATGTTCGATATTAGAATGGCTACTCCAGCTTGTTTCTTTGGACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTATGTTCGATATTAGAATGGCTACTCCAGCTTGTTTCTTTGGACCA  700

seq1  TTTGCTTGGAAATTTGTTTTCCAGCCTTTCACTCTGAGGTAGTGTCTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTGGAAATTTGTTTTCCAGCCTTTCACTCTGAGGTAGTGTCTGTC  750

seq1  CTTTTCCATGAGGTGAGTTTCCTGTAAGCAGCAAAAAGTTGAGTCCTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCATGAGGTGAGTTTCCTGTAAGCAGCAAAAAGTTGAGTCCTGTT  800

seq1  TCTGTAGCCAGTCTGAGGACCATGATATAGCTCTCTCTTGTGAGGCTATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGCCAGTCTGAGGACCATGATATAGCTCTCTCTTGTGAGGCTATG  850

seq1  CCAGTGCCTGACAAATACAGAAGTGAA  877
      |||||||||||||||||||||||||||
seq2  CCAGTGCCTGACAAATACAGAAGTGAA  877


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