BAC Information

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BAC

Clone NameB6Ng01-306G03
Chromosome9 (Build37)
Map Location 26,193,066 - 26,194,071
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666327, 2310005P05Rik
Downstream geneB3gat1, BC038479, Glb1l3, Gm1110, LOC330907, Acad8, Thyn1, Vps26b, Ncapd3, Jam3, Igsf9b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306G03.bB6Ng01-306G03.g
ACCGA099437GA099438
length1,0031,158
definitionB6Ng01-306G03.b B6Ng01-306G03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttaaccatgtgtttttgaccaggtttatatacccctgcatgga
ttttatcctatggaaatctcaaatacagttggaatatggttggttagccc
cataatagttatgacactattgtaaaagtaggtacatattggctttcagg
ttgatactggttcatagggttttcagctgcttaagagccagtaacaaaca
aaagtgccagttggcttgtgtattcttcctttgacaaaatctacaattgt
gtgaaatgctgtgactctaagagctgcatcctagagcaagaagagcagga
cctgcaaaatggacacccacaactgactgacatgtcctgctctgtttact
tctcatcattgggctgtctgctcatctctctacttggttgtggtggcagt
tcaatcatgagactggacaacggtgtattgaattacagttccactgtgct
ttgtctaactttggtcagagatttatttcatttggaatctttggggggtg
gacaaacatttgaagacacccagagacacccagtccacagcatggcccac
ctgcagcatgagggagtaaggggtcaagagatgaaagagaaagagaagga
gatggttaaagcactatgaagagaggtagatctggagacatgagagtgga
gataaacatcttgatgtgagtagcctgctatgccacctgaggtcatggtg
aattccctgcccatactgccaataaggaccatgtctaggtctgtgaccat
gtagcagcagaggtctgtgttgacatctgtggcccatattaccaacaagg
gccattcagatgtccctggtctggggtcatgatgatatctaagggttgca
cagagctgacctacctcctcactgcataaagaccccacctcttacctgga
cagcacagtagagctgactctggtggcaggggcatgagcaaacaggctcc
aaggtatgagcatgtaagagctggttctgctcctgtcatgcaggagagga
gag
gaattccattgatcaacctgtctgtttctataccaataccatgtggtatc
tattgctatttctctgcagtacagattgaaatcagggatggtaatatctc
cagaagtactcttattgtacaaggttgtttcagctatcctgaggtttgac
cttttccatgtaaagatgataattgttctttcaaagtctataaggaattg
ggttggaatttttgttggaattgcaatgaatctgaaaattgtttttgtaa
gatggccattattgctatgctaatcctactgatccatgggcatggaagat
ctttccatcttctgatctcttattcaatttctttcttcaccactttaaag
ttcttgtcatagatgtatttcacttccttggttagagttatatcaagatg
ttatatataatatgtggctattttcttttaactctttttttcttttcctt
tctttctttctttctttctttctttctttctttctttctttctttctttc
tttctttctttttttttttgtataaagaagggctactgatcttttatagt
tattttgtatccagccaccttgctgatgatgtttatcagcagtaggaacc
agcaggagttccctggtagaaatttgggggttacttacatatataatcat
attatctgtgaatattttgacttctttaccaatttttatacatttggtat
ctcttagttcacttatttctctagctagaagttcaagtactgtgttgaag
aaatagggaaagagtggcaagccatgtgttgtcaatgattttagtggaat
tgcttacagtttctctacatttaatttaatgttgtcaattggctttctgt
atattgcatttattgtgttcatatatgggccttatatttctgatctgtgc
aagtcttttaacaagtaggggtgttatattttgccaaggcatttttagta
tcaatgaatggctcatgtgttttttcttttcagttgcttctatatggaat
catgatggattttcatataattgaacatccctacatccctgcatctctgg
atgaagcctactggatctgtagaatgatttttaatgtgtccttgaattag
cttgcaagataatgagtactaccattgattcataagggaatttatttgaa
aatctgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_26193066_26194071
seq2: B6Ng01-306G03.b_43_1045 (reverse)

seq1  CTCTCTCTCTCCTGCATGACAAGGAGCAGAACCAGCTCTTACATGCTCAT  50
      ||||| |||||||||||||| |||||||||||||||||||||||||||||
seq2  CTCTC-CTCTCCTGCATGAC-AGGAGCAGAACCAGCTCTTACATGCTCAT  48

seq1  ACCCTTGGAGCCTGTTTGCTCATGCCCCTGCCACCAGAGTCAGCTCTACT  100
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-CCTTGGAGCCTGTTTGCTCATGCCCCTGCCACCAGAGTCAGCTCTACT  97

seq1  GTGCTGTCCAGGTAAGAGGTGGGGTCTTTATGCAGTGAGGAGGTAGGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTCCAGGTAAGAGGTGGGGTCTTTATGCAGTGAGGAGGTAGGTCA  147

seq1  GCTCTGTGCAACCCTTAGATATCATCATGACCCCAGACCAGGGACATCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTGCAACCCTTAGATATCATCATGACCCCAGACCAGGGACATCTG  197

seq1  AATGGCCCTTGTTGGTAATATGGGCCACAGATGTCAACACAGACCTCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCCCTTGTTGGTAATATGGGCCACAGATGTCAACACAGACCTCTGC  247

seq1  TGCTACATGGTCACAGACCTAGACATGGTCCTTATTGGCAGTATGGGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACATGGTCACAGACCTAGACATGGTCCTTATTGGCAGTATGGGCAG  297

seq1  GGAATTCACCATGACCTCAGGTGGCATAGCAGGCTACTCACATCAAGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCACCATGACCTCAGGTGGCATAGCAGGCTACTCACATCAAGATG  347

seq1  TTTATCTCCACTCTCATGTCTCCAGATCTACCTCTCTTCATAGTGCTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTCCACTCTCATGTCTCCAGATCTACCTCTCTTCATAGTGCTTTA  397

seq1  ACCATCTCCTTCTCTTTCTCTTTCATCTCTTGACCCCTTACTCCCTCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTCCTTCTCTTTCTCTTTCATCTCTTGACCCCTTACTCCCTCATG  447

seq1  CTGCAGGTGGGCCATGCTGTGGACTGGGTGTCTCTGGGTGTCTTCAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGGTGGGCCATGCTGTGGACTGGGTGTCTCTGGGTGTCTTCAAATG  497

seq1  TTTGTCCACCCCCCAAAGATTCCAAATGAAATAAATCTCTGACCAAAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCACCCCCCAAAGATTCCAAATGAAATAAATCTCTGACCAAAGTT  547

seq1  AGACAAAGCACAGTGGAACTGTAATTCAATACACCGTTGTCCAGTCTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAGCACAGTGGAACTGTAATTCAATACACCGTTGTCCAGTCTCAT  597

seq1  GATTGAACTGCCACCACAACCAAGTAGAGAGATGAGCAGACAGCCCAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGAACTGCCACCACAACCAAGTAGAGAGATGAGCAGACAGCCCAATG  647

seq1  ATGAGAAGTAAACAGAGCAGGACATGTCAGTCAGTTGTGGGTGTCCATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAGTAAACAGAGCAGGACATGTCAGTCAGTTGTGGGTGTCCATTT  697

seq1  TGCAGGTCCTGCTCTTCTTGCTCTAGGATGCAGCTCTTAGAGTCACAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTCCTGCTCTTCTTGCTCTAGGATGCAGCTCTTAGAGTCACAGCA  747

seq1  TTTCACACAATTGTAGATTTTGTCAAAGGAAGAATACACAAGCCAACTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACACAATTGTAGATTTTGTCAAAGGAAGAATACACAAGCCAACTGG  797

seq1  CACTTTTGTTTGTTACTGGCTCTTAAGCAGCTGAAAACCCTATGAACCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTGTTTGTTACTGGCTCTTAAGCAGCTGAAAACCCTATGAACCAG  847

seq1  TATCAACCTGAAAGCCAATATGTACCTACTTTTACAATAGTGTCATAACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAACCTGAAAGCCAATATGTACCTACTTTTACAATAGTGTCATAACT  897

seq1  ATTATGGGGCTAACCAACCATATTCCAACTGTATTTGAGATTTCCATAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGGGGCTAACCAACCATATTCCAACTGTATTTGAGATTTCCATAGG  947

seq1  ATAAAATCCATGCAGGGGTATATAAACCTGGTCAAAAACACATGGTTAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATCCATGCAGGGGTATATAAACCTGGTCAAAAACACATGGTTAAG  997

seq1  GAATTC  1006
      ||||||
seq2  GAATTC  1003