BAC Information

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BAC

Clone NameB6Ng01-308B05
Chromosome9 (Build37)
Map Location 103,342,136 - 103,469,816
singlet/doubletdoublet
Overlap geneBfsp2, Tmem108, 4932413F04Rik
Upstream geneKy, LOC664843, Cep63, Anapc13, Amotl2, EG434510, Ryk, Slco2a1, Rab6b, Srprb, Trf, 1300017J02Rik, Topbp1, Cdv3
Downstream geneEG384978, Nphp3, Ube1dc1, Acad11, Ccrl1, Hmgb1-rs16, Acpp, LOC100040921
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308B05.bB6Ng01-308B05.g
ACCGA100672GA100673
length946504
definitionB6Ng01-308B05.b B6Ng01-308B05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,342,136 - 103,342,921)(103,469,307 - 103,469,816)
sequence
gaattctcgaattttgttttcttaaaaaaaaaaaaaaaccagaacccaaa
acctagaaatataagaatatgtttttggctgggaagtggtggtgcacacc
tttaatcccagcacttgggaggcagaggcaggtggatttctgagttcaag
accagcctggtctatagagtgagttccaggacagccaggactacacagag
aaactctgtctcgaaaaaaaaaatgtgtttttgttttaatctcaggtgta
gggatgcgaggatgcttcggatggtccttggcagccagcagctgaccgtg
atttgcctcgtggtctagcatagacatttttgccagctgcagacagtttc
tgcagttgtgtgatgtttggaattctgggaacttttcagagggtgtaaaa
gtgctagtgctccaagcttggagttggtggttggacattcagggagtttg
gatgtagtttgttagtagtcttgctcacagaagaaacaaaaggaaagaaa
ctagatttagggatttctcccttcctctctctctttctctctctcccctc
ctaccttccctttctctctctatccttctttctctcctatcaagtgatag
gggatgaaaccagggaggataaagggtgggaaaaagaaaaacccacaaat
tagcaaaacagtgatgttctctgatgtggctccagaacaccgttttctgt
tggtcaaaggccaccatagagatgtttacattctatcatataaactccca
cggagttagggagacccaagactctccctcctccttctcttccctcctcc
ccaccacctctcccattctttccatgaaatacatccataaaatgggcatt
cctgtggtctgaatgtgaaaatgttgcacgaacatgtgtgtttgaacgct
tgggtccccagttatgggtcctttaggaggaggtggggggagggtc
ctcatctctgactccatggtcccacattctctagcagactgctcaaccgt
attcacatggaggcttaacaggtatctaagagaagagactggcccacaca
agacctcttgaagtccagtcccagagccagtacactgtcccttccttcta
tattttactggccaaagtaagtcacaggccagcctatattcaaggggtac
agaaaagtttaactcctggtggaaatggccccccaggctgtgttgcagag
gacatgaacactatgaaaggaagaagggaggccaattgtacaacctaccc
atagttcctcacaagattatgttcttgaatggaaagagtaagtggtgttt
aaattgccagtgtgaaggaagaggcagcgagtatcaaagggatttgcatg
tttaagtgcaagaacacatgagagccaaagtctggccatggaacactaaa
gtgtgcaaaactggtgttgttggggaaataatgtgtagggtgtgagtgtg
tgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_103342136_103342921
seq2: B6Ng01-308B05.b_202_989

seq1  GGTCTATAGAGTGAGTTCCAGGACAGCCAGGACTACACAGAGAAACTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTATAGAGTGAGTTCCAGGACAGCCAGGACTACACAGAGAAACTCTG  50

seq1  TCTCGAAAAAAAAAATGTGTTTTTGTTTTAATCTCAGGTGTAGGGATGCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGAAAAAAAAAATGTGTTTTTGTTTTAATCTCAGGTGTAGGGATGCG  100

seq1  AGGATGCTTCGGATGGTCCTTGGCAGCCAGCAGCTGACCGTGATTTGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCTTCGGATGGTCCTTGGCAGCCAGCAGCTGACCGTGATTTGCCT  150

seq1  CGTGGTCTAGCATAGACATTTTTGCCAGCTGCAGACAGTTTCTGCAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGTCTAGCATAGACATTTTTGCCAGCTGCAGACAGTTTCTGCAGTTG  200

seq1  TGTGATGTTTGGAATTCTGGGAACTTTTCAGAGGGTGTAAAAGTGCTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGTTTGGAATTCTGGGAACTTTTCAGAGGGTGTAAAAGTGCTAGT  250

seq1  GCTCCAAGCTTGGAGTTGGTGGTTGGACATTCAGGGAGTTTGGATGTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAAGCTTGGAGTTGGTGGTTGGACATTCAGGGAGTTTGGATGTAGT  300

seq1  TTGTTAGTAGTCTTGCTCACAGAAGAAACAAAAGGAAAGAAACTAGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGTAGTCTTGCTCACAGAAGAAACAAAAGGAAAGAAACTAGATTT  350

seq1  AGGGATTTCTCCCTTCCTCTCTCTCTTTCTCTCTCTCCCCTCCTACCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTTCTCCCTTCCTCTCTCTCTTTCTCTCTCTCCCCTCCTACCTTC  400

seq1  CCTTTCTCTCTCTATCCTTCTTTCTCTCCTATCAAGTGATAGGGGATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTCTCTCTATCCTTCTTTCTCTCCTATCAAGTGATAGGGGATGAA  450

seq1  ACCAGGGAGGATAAAGGGTGGGAAAAAGAAAAACCCACAAATTAGCAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGGAGGATAAAGGGTGGGAAAAAGAAAAACCCACAAATTAGCAAAA  500

seq1  CAGTGATGTTCTCTGATGTGGCTCCAGAACACCGTTTTCTGTTGGTCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATGTTCTCTGATGTGGCTCCAGAACACCGTTTTCTGTTGGTCAAA  550

seq1  GGCCACCATAGAGATGTTTACATTCTATCATATAAACTCCCACGGAGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACCATAGAGATGTTTACATTCTATCATATAAACTCCCACGGAGTTA  600

seq1  GGGAGACCCAAGACTCTCCCTCCTCCTTCTCTTCCCTCCTCCCCACCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGACCCAAGACTCTCCCTCCTCCTTCTCTTCCCTCCTCCCCACCACC  650

seq1  TCTCCCATTCTTTCCATGAAATACATCCATAAAATGGGCATTCCTGTGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCATTCTTTCCATGAAATACATCCATAAAATGGGCATTCCTGTGGT  700

seq1  CTGAATGTGAAAATGTTGCACGAACATGTGTGTTTGAACGCTT-GGTCCC  749
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTGAATGTGAAAATGTTGCACGAACATGTGTGTTTGAACGCTTGGGTCCC  750

seq1  CAGTTATGGGTCCTTTAGGAGGAGGT-GGGGGAGGGTC  786
      |||||||||||||||||||||||||| |||||||||||
seq2  CAGTTATGGGTCCTTTAGGAGGAGGTGGGGGGAGGGTC  788

seq1: chr9_103469307_103469816
seq2: B6Ng01-308B05.g_67_576 (reverse)

seq1  CACACACACTCACACCCTACACATTATTTCCCCAACAACACCAGTTTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACTCACACCCTACACATTATTTCCCCAACAACACCAGTTTTGC  50

seq1  ACACTTTAGTGTTCCATGGCCAGACTTTGGCTCTCATGTGTTCTTGCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTAGTGTTCCATGGCCAGACTTTGGCTCTCATGTGTTCTTGCACT  100

seq1  TAAACATGCAAATCCCTTTGATACTCGCTGCCTCTTCCTTCACACTGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATGCAAATCCCTTTGATACTCGCTGCCTCTTCCTTCACACTGGCA  150

seq1  ATTTAAACACCACTTACTCTTTCCATTCAAGAACATAATCTTGTGAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAACACCACTTACTCTTTCCATTCAAGAACATAATCTTGTGAGGAA  200

seq1  CTATGGGTAGGTTGTACAATTGGCCTCCCTTCTTCCTTTCATAGTGTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGGTAGGTTGTACAATTGGCCTCCCTTCTTCCTTTCATAGTGTTCA  250

seq1  TGTCCTCTGCAACACAGCCTGGGGGGCCATTTCCACCAGGAGTTAAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCTGCAACACAGCCTGGGGGGCCATTTCCACCAGGAGTTAAACTT  300

seq1  TTCTGTACCCCTTGAATATAGGCTGGCCTGTGACTTACTTTGGCCAGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTACCCCTTGAATATAGGCTGGCCTGTGACTTACTTTGGCCAGTAA  350

seq1  AATATAGAAGGAAGGGACAGTGTACTGGCTCTGGGACTGGACTTCAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGAAGGAAGGGACAGTGTACTGGCTCTGGGACTGGACTTCAAGAG  400

seq1  GTCTTGTGTGGGCCAGTCTCTTCTCTTAGATACCTGTTAAGCCTCCATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGTGTGGGCCAGTCTCTTCTCTTAGATACCTGTTAAGCCTCCATGT  450

seq1  GAATACGGTTGAGCAGTCTGCTAGAGAATGTGGGACCATGGAGTCAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACGGTTGAGCAGTCTGCTAGAGAATGTGGGACCATGGAGTCAGAGA  500

seq1  TGAGGAATTC  510
      ||||||||||
seq2  TGAGGAATTC  510