BAC Information

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BAC

Clone NameB6Ng01-310K17
Chromosome9 (Build37)
Map Location 30,518,504 - 30,519,311
singlet/doubletsinglet
Overlap genenone
Upstream geneHnt, Snx19, LOC666478
Downstream geneAdamts15, Adamts8, Zbtb44, BC038156, St14, Aplp2, EG638580, EG666539, Prdm10, Nfrkb, Tmem45b, LOC666558, EG666576
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310K17.bB6Ng01-310K17.g
ACCGA102585GA102586
length1,0301,176
definitionB6Ng01-310K17.b B6Ng01-310K17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaggccagccagggctacatgcatagtgagtgcctgtctgaaaa
acaaaaagcgtaattcaaatctgtttctttttaaaaactaactatgatac
ataaatgccaagtttaatacattttcatgagctttaaaagctcagttcac
gctttaagcacatatagacatagtaatcacaatgccagagcactgccctg
caagaaggcattgctctattccacagcttcttagaatccatggtaaggga
cagatcacatagctgaatgcaggaggatacacacgcgagcgcgggaccat
acacacacacatctgacaacggtacaagtttgcaaacatttgaagaccaa
aattaactcaaaatcaaacacgatgaatctgagagccttccaacagcact
cagccatgctgaactaagcaagtttactgcagccttgtttctgaaaacat
aacacaactatttggcaccatgtgaactatacaaccaatagtgcctgaaa
cgccttgctcagcctcaggacccctgtgtgttatgaattacagtggttta
gtttcattttctatacatgccaagttttctgctcttacaaacatctgttc
aaacacaaaatagtgtgaagtggaggagacttttaatatttctcttctac
cagtccttagcatgtcaatatcaaattagcatatctttgaattgtgttgt
taaactatttgacttttaaaatccatttgggttgttaacttgagctttac
ttttataaaaactgttacatgaattttggctcatgattaggacagaattt
ctaataattttttaagtgatctgaaacattctttcttgttttctattata
tattaatgggaagctgctctcttagcaatggctatcaaacgtcaacatat
tcatcaactctgaaacatattgtcattggtttggcatctttcagtgtcaa
ctattcagccaatacttaaattgtttattaaaaactgaatatttatattt
agctcattatagtgtaaattttgttttgcc
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatctttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacactattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccagagctaaagggatctgcaaccctat
aggtggacacatatgactacagtaccccggagctctgactctagctgcat
attattatcaaagatgctagtcgtcatcactgtaaagaagaggtccaatg
actgcaacctttataatgcccagttaggaatcagcaaaagggaatggttg
gcagagggaatgatgtggcttacctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_30518504_30519311
seq2: B6Ng01-310K17.b_46_853

seq1  GAATTCTAGGCCAGCCAGGGCTACATGCATAGTGAGTGCCTGTCTGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGCCAGCCAGGGCTACATGCATAGTGAGTGCCTGTCTGAAAA  50

seq1  ACAAAAAGCGTAATTCAAATCTGTTTCTTTTTAAAAACTAACTATGATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAGCGTAATTCAAATCTGTTTCTTTTTAAAAACTAACTATGATAC  100

seq1  ATAAATGCCAAGTTTAATACATTTTCATGAGCTTTAAAAGCTCAGTTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGCCAAGTTTAATACATTTTCATGAGCTTTAAAAGCTCAGTTCAC  150

seq1  GCTTTAAGCACATATAGACATAGTAATCACAATGCCAGAGCACTGCCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAAGCACATATAGACATAGTAATCACAATGCCAGAGCACTGCCCTG  200

seq1  CAAGAAGGCATTGCTCTATTCCACAGCTTCTTAGAATCCATGGTAAGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGGCATTGCTCTATTCCACAGCTTCTTAGAATCCATGGTAAGGGA  250

seq1  CAGATCACATAGCTGAATGCAGGAGGATACACACGCGAGCGCGGGACCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCACATAGCTGAATGCAGGAGGATACACACGCGAGCGCGGGACCAT  300

seq1  ACACACACACATCTGACAACGGTACAAGTTTGCAAACATTTGAAGACCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACATCTGACAACGGTACAAGTTTGCAAACATTTGAAGACCAA  350

seq1  AATTAACTCAAAATCAAACACGATGAATCTGAGAGCCTTCCAACAGCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAACTCAAAATCAAACACGATGAATCTGAGAGCCTTCCAACAGCACT  400

seq1  CAGCCATGCTGAACTAAGCAAGTTTACTGCAGCCTTGTTTCTGAAAACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATGCTGAACTAAGCAAGTTTACTGCAGCCTTGTTTCTGAAAACAT  450

seq1  AACACAACTATTTGGCACCATGTGAACTATACAACCAATAGTGCCTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAACTATTTGGCACCATGTGAACTATACAACCAATAGTGCCTGAAA  500

seq1  CGCCTTGCTCAGCCTCAGGACCCCTGTGTGTTATGAATTACAGTGGTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTTGCTCAGCCTCAGGACCCCTGTGTGTTATGAATTACAGTGGTTTA  550

seq1  GTTTCATTTTCTATACATGCCAAGTTTTCTGCTCTTACAAACATCTGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATTTTCTATACATGCCAAGTTTTCTGCTCTTACAAACATCTGTTC  600

seq1  AAACACAAAATAGTGTGAAGTGGAGGAGACTTTTAATATTTCTCTTCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAAAATAGTGTGAAGTGGAGGAGACTTTTAATATTTCTCTTCTAC  650

seq1  CAGTCCTTAGCATGTCAATATCAAATTAGCATATCTTTGAATTGTGTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTTAGCATGTCAATATCAAATTAGCATATCTTTGAATTGTGTTGT  700

seq1  TAAACTATTTGACTTTTAAAATCCATTTGGGTTGTTAACTTGAGCTTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTATTTGACTTTTAAAATCCATTTGGGTTGTTAACTTGAGCTTTAC  750

seq1  TTTTATAAAAACTGTTACATGAATTTTGGCTCATGATTAGGACAGAATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAAAAACTGTTACATGAATTTTGGCTCATGATTAGGACAGAATTT  800

seq1  CTAATAAT  808
      ||||||||
seq2  CTAATAAT  808