BAC Information

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BAC

Clone NameB6Ng01-311L23
Chromosome9 (Build37)
Map Location 22,964,333 - 22,965,451
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100034724, 9530015I07Rik, 1810064F22Rik, Zfp809, BC050092, Zfp810, LOC100041826, EG625603, Anln, 9530077C05Rik, rp9, LOC100041870, Bbs9, LOC100040805
Downstream geneBmper, LOC100040866, LOC100040878, LOC100040893, Npsr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311L23.bB6Ng01-311L23.g
ACCGA103390GA103391
length1,1071,146
definitionB6Ng01-311L23.b B6Ng01-311L23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaaaataacactaagatattttgagacaaagactacattctc
acggtttataaatgtgctttgactcgccctcttctatttgtagtaataat
tgttaatttcttactgtacttgatttataaattaaactttatcataggtc
tgtgtgtacaagaaagaccccattgtctgttggtattgctcatggtttca
gaagtccactggagatccctgtgatgcccctgaggacaagaaagaactgc
tgcatattgttttccttgaactaatattattttatcagcttatatgcagt
gtttggtttccagcagtatttttaagaccttctgattcaaacataccttg
ctccaccactgaagacttataaagcttcaaacttgacaagtccccacaca
aactaattcacgccattgctctgagccttcaacactcagccatcactagt
cacacaggagtcctgtagggcctgagatctggtctaactcacctgctctc
tttctatctcacacccctttcacctcacttgccatcttcatgtccttccc
agttccactggtgcttccccctcagcatcctctctgctttctcctgaaag
gctggggcctccctactttctatctcaggcagtctgttgcactgcaggcc
aaggggcacctttaaaagatgagttggaaacatcaaccccactggttaac
tgtctctttgcatagttagggttgttgtttattaaatgtctctctgtttc
tgatcatacttcagagcaacagaaaagacactggggtgctacctcagtaa
atgggaaaggagtactcttaataactgacttgtacctactgtctaaggtt
aactacagctaaactacttccagatctagtgttaggatgtcttagataca
gcccaaggcataagaatgcaatagctagagggccaaaagttcagttatga
tggattcatctctacctactggaccatcagcttctagatactctcctaat
ttactatgatactacatggctgtagagggtaacagaatctatggttgaga
agagagactgattgatatgtcatgttcagcctctctatatggaatatcta
gagtttg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgcccgggggcctagcaa
acacagaagtggatgctcacagtcagctaatggatggatcacaggctccc
aatggaggagctagagaagtaccagagctaaagggatcttcaccctatag
tgacacatatgactacagtaccctgagctctgactctagctgcaatatgt
atcaagatgcttagtcgcatccacttgaagaagtcaatggaaccgctgac
tggtgccgatacaggatcgccagggccaaagggggggaaaatgcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_22964333_22965451
seq2: B6Ng01-311L23.b_49_1155

seq1  GAATTCTTTAAAATAACACTAAGATATTTTGAGACAAAGACTACATTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAAATAACACTAAGATATTTTGAGACAAAGACTACATTCTC  50

seq1  ACGGTTTATAAATGTGCTTTGACTCGCCCTCTTCTATTTGTAGTAATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTTTATAAATGTGCTTTGACTCGCCCTCTTCTATTTGTAGTAATAAT  100

seq1  TGTTAATTTCTTACTGTACTTGATTTATAAATTAAACTTTATCATAGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATTTCTTACTGTACTTGATTTATAAATTAAACTTTATCATAGGTC  150

seq1  TGTGTGTACAAGAAAGACCCCATTGTCTGTTGGTATTGCTCATGGTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTACAAGAAAGACCCCATTGTCTGTTGGTATTGCTCATGGTTTCA  200

seq1  GAAGTCCACTGGAGATCCCTGTGATGCCCCTGAGGACAAGAAAGAACTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCCACTGGAGATCCCTGTGATGCCCCTGAGGACAAGAAAGAACTGC  250

seq1  TGCATATTGTTTTCCTTGAACTAATATTATTTTATCAGCTTATATGCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATTGTTTTCCTTGAACTAATATTATTTTATCAGCTTATATGCAGT  300

seq1  GTTTGGTTTCCAGCAGTATTTTTAAGACCTTCTGATTCAAACATACCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTTTCCAGCAGTATTTTTAAGACCTTCTGATTCAAACATACCTTG  350

seq1  CTCCACCACTGAAGACTTATAAAGCTTCAAACTTGACAAGTCCCCACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCACTGAAGACTTATAAAGCTTCAAACTTGACAAGTCCCCACACA  400

seq1  AACTAATTCACGCCATTGCTCTGAGCCTTCAACACTCAGCCATCACTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATTCACGCCATTGCTCTGAGCCTTCAACACTCAGCCATCACTAGT  450

seq1  CACACAGGAGTCCTGTAGGGCCTGAGATCTGGTCTAACTCACCTGCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGGAGTCCTGTAGGGCCTGAGATCTGGTCTAACTCACCTGCTCTC  500

seq1  TTTCTATCTCACACCCCTTTCACCTCACTTGCCATCTTCATGTCCTTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATCTCACACCCCTTTCACCTCACTTGCCATCTTCATGTCCTTCCC  550

seq1  AGTTCCACTGGTGCTTCCCCCTCAGCATCCTCTCTGCTTTCTCCTGAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCACTGGTGCTTCCCCCTCAGCATCCTCTCTGCTTTCTCCTGAAAG  600

seq1  GCTGGGGCCTCCCTACTTTCTATCTCAGGCAGTCTGTTGCACTGCAGGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGCCTCCCTACTTTCTATCTCAGGCAGTCTGTTGCACTGCAGGCC  650

seq1  AAGGGGCACCTTTAAAAGATGAGTTGGAAACATCAACCCCACTGGTTAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGCACCTTTAAAAGATGAGTTGGAAACATCAACCCCACTGGTTAAC  700

seq1  TGTCTCTTTGCATAGTTAGGGTTGTTGTTTATTAAATGTCTCTCTGTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTTTGCATAGTTAGGGTTGTTGTTTATTAAATGTCTCTCTGTTTC  750

seq1  TGATCATACTTCAGAGCAACAGAAAAGACACTGGGGTGCTACCTCAGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCATACTTCAGAGCAACAGAAAAGACACTGGGGTGCTACCTCAGTAA  800

seq1  ATGGG-AAGGAGTACTCTTAATAACTGACTTGTACCTACTGTCTAAGGTT  849
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAAGGAGTACTCTTAATAACTGACTTGTACCTACTGTCTAAGGTT  850

seq1  AACTACAGCTAAACTACTTCCAGATCTAGTGTTAGGATGTCTTAGATACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACAGCTAAACTACTTCCAGATCTAGTGTTAGGATGTCTTAGATACA  900

seq1  GCCCAAGGCCATAAGAATGCAATAGCTAGAGGGCCAAAAGTTCAGTTATG  949
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAGG-CATAAGAATGCAATAGCTAGAGGGCCAAAAGTTCAGTTATG  949

seq1  ATGGATTCATCTCCTACCTACTGGACCATCAGCTTCTAGATACTCTTCCT  999
      |||||||||||| |||||||||||||||||||||||||||||||| ||||
seq2  ATGGATTCATCT-CTACCTACTGGACCATCAGCTTCTAGATACTC-TCCT  997

seq1  AATTTACTATTGATTAACTACATGGCTTGTTAAGAGGGT-ACAGAATCTA  1048
      ||||||||| ||||  |||||||||| |||  ||||||| ||||||||||
seq2  AATTTACTA-TGAT--ACTACATGGC-TGT--AGAGGGTAACAGAATCTA  1041

seq1  TTGTTTGAGGAAAGAGGAAGACTGATTTGATATGTCATGTTCAG-CTCTC  1097
       || |||||  |||||  ||||||| |||||||||||||||||| |||||
seq2  -TGGTTGAG--AAGAG--AGACTGA-TTGATATGTCATGTTCAGCCTCTC  1085

seq1  TATAT-GAATATCTAAGAGTTTG  1119
      ||||| |||||||| ||||||||
seq2  TATATGGAATATCT-AGAGTTTG  1107