BAC Information

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BAC

Clone NameB6Ng01-314D05
Chromosome9 (Build37)
Map Location 5,259,760 - 5,260,291
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039253, Aasdhppt, Kbtbd3, LOC664860, 8430410K20Rik, Gria4, EG664889
Downstream geneCasp1, Casp4, Casp12, LOC547033, LOC100039361, LOC100039372, LOC664957, LOC676037, Pdgfd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314D05.bB6Ng01-314D05.g
ACCGA105207GA105208
length9551,158
definitionB6Ng01-314D05.b B6Ng01-314D05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcactaaagcatgcacaagacaaatttcaggaaaactcatagg
tcaaaggttttatggatggatttatgtctcaatcactccattagaagtct
tgcctggttacaggtgtaggtcagttgaggcatcgtatttgtcattgcta
gacacctaggtagggactccatcatagattcttgtgagtttcctttattc
taggtttctagttcatataaaagatgtcccccaattctaattgtctcacc
atgttctctttccctctgtcttctactcacctgatcactccttttctagt
ccctagccccactcatatccaacccctcttcccattccaaccacaatgtc
tatcttatttcctcctctcagtgagatttgggtgtttcccacttgaactg
tcattgttaattaccttctttgggtctgtggattgcatcctttattaaat
agctaatattcacttaaacacgaatacagactgtgtgtatctttctgggt
ctgggttatctcactcaggatggtattttatatatctacccatttgcttg
caaatttaatgacattttaaaaaatagctcagttatattccatagtataa
atgtatcatattttctttattcattttttgatgagggatatctaggtttt
tttttctagtttctgtctgttatgaataaagctgctatgcatataactga
gcatatgtccttatgatatggtggaacagcctttccttatatgcccagga
atgatataattgagtcttctattagattccttcccaattttctaagaaac
caccaaatggatttccaaatttattaacaatttatacttccatcagcaat
gggaactgttccatattcctgcaaacatgagctgtcacttgtgttactga
tatcagccattctgatgagtggaaaatggaatctgagatttttgatttgc
atttc
gaattcattagatgtgcactcactgataagtgggtattagcccagaaaca
tagaacacccaagatacaatttgcaaaacacaagaaaatcaaggagaagg
aagttgttgtatttttgagaatagcttttgctatctttcattttttgtta
taccaaatgaatttgcaaattgctctttgtagctctatgaagaattgagt
tggaattttgatgggcagtgcaatgaatctatagattgcttttggcaaga
agaccatttttactatattaagcagtcaatccatgaacatgggaaatctt
tccagtttcttatatctttgatttctttcttcagaaacttgaaattcttg
taatgaacatctttcacttgcttggttaaagtcacaccaagttattttat
attatttgtgactattgtgaagggtgtcctttccctaatttctttctcag
tttgtttttcctttgagtataggagtctattgattggtctgagttaattt
atatccagcaagtttgctgaagttgtttatcaggtttaggagttctctca
tggaatttttggttcacataagtatactagcatatcatctgcaaattgtg
atattttgacttcctcctttccattttgtatccttttgacctccttttat
tgtctaatttctctggctagaatttcgagtactgtcttgaataggtagtg
agagaatgggcagccttatctagtccctgagattagtgaaatttcttcaa
ttttctctccatttagtttgatgttggctactggtttgctgtatagtgct
tttactttaagtttggaccttgaattcttgatctttccaagatttttact
gtgaagggatgtttttaattttgtcaaaggctttctcagcatctaatgag
atgattatgtgggttttattcccctttgagtttgtttatatggtggatca
tgttgacagattttcatatatagaacctttccctgaatccatgggatgaa
gctatgtgatcatgatggatgatcattttgatgtgtctgaatttgttgca
agattttatttgcataattattcataagcaaaatgtcttgaagttctccc
ttctgtcgtcttgtatggttaagtatggagtgtaatagtgggccctccca
tagaatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_5259760_5260291
seq2: B6Ng01-314D05.b_43_574

seq1  GAATTCTTCACTAAAGCATGCACAAGACAAATTTCAGGAAAACTCATAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCACTAAAGCATGCACAAGACAAATTTCAGGAAAACTCATAGG  50

seq1  TCAAAGGTTTTATGGATGGATTTATGTCTCAATCACTCCATTAGAAGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGTTTTATGGATGGATTTATGTCTCAATCACTCCATTAGAAGTCT  100

seq1  TGCCTGGTTACAGGTGTAGGTCAGTTGAGGCATCGTATTTGTCATTGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGTTACAGGTGTAGGTCAGTTGAGGCATCGTATTTGTCATTGCTA  150

seq1  GACACCTAGGTAGGGACTCCATCATAGATTCTTGTGAGTTTCCTTTATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCTAGGTAGGGACTCCATCATAGATTCTTGTGAGTTTCCTTTATTC  200

seq1  TAGGTTTCTAGTTCATATAAAAGATGTCCCCCAATTCTAATTGTCTCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTCTAGTTCATATAAAAGATGTCCCCCAATTCTAATTGTCTCACC  250

seq1  ATGTTCTCTTTCCCTCTGTCTTCTACTCACCTGATCACTCCTTTTCTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTCTTTCCCTCTGTCTTCTACTCACCTGATCACTCCTTTTCTAGT  300

seq1  CCCTAGCCCCACTCATATCCAACCCCTCTTCCCATTCCAACCACAATGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGCCCCACTCATATCCAACCCCTCTTCCCATTCCAACCACAATGTC  350

seq1  TATCTTATTTCCTCCTCTCAGTGAGATTTGGGTGTTTCCCACTTGAACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTATTTCCTCCTCTCAGTGAGATTTGGGTGTTTCCCACTTGAACTG  400

seq1  TCATTGTTAATTACCTTCTTTGGGTCTGTGGATTGCATCCTTTATTAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTTAATTACCTTCTTTGGGTCTGTGGATTGCATCCTTTATTAAAT  450

seq1  AGCTAATATTCACTTAAACACGAATACAGACTGTGTGTATCTTTCTGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATATTCACTTAAACACGAATACAGACTGTGTGTATCTTTCTGGGT  500

seq1  CTGGGTTATCTCACTCAGGATGGTATTTTATA  532
      ||||||||||||||||||||||||||||||||
seq2  CTGGGTTATCTCACTCAGGATGGTATTTTATA  532