BAC Information

Click to search

BAC

Clone NameB6Ng01-324G23
Chromosome9 (Build37)
Map Location 38,786,639 - 38,787,826
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933
Downstream geneOlfr934, Olfr935, Olfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1, Olfr27, Olfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945, GA_x5J8B7W60AJ-354484-355428, Olfr947-ps1, Olfr948, LOC667312, Olfr949-ps1, Olfr950-ps1, Olfr951, Olfr952, Olfr953-ps1, Olfr954, Olfr955, Olfr956-ps1, Olfr44, Olfr957, Olfr958, Olfr959, AW551984, Olfr148, Olfr960, Olfr961, GA_x5J8B7W60AJ-4787-4010, Olfr963, Olfr964-ps1, Olfr149, Olfr965, Olfr966-ps1, Olfr150, Olfr967, Olfr968, Olfr969, Olfr970, Olfr971, Olfr972, Olfr973, LOC100043015, Olfr974, Olfr975, Olfr976, Olfr977-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324G23.bB6Ng01-324G23.g
ACCGA112751GA112752
length1,1861,208
definitionB6Ng01-324G23.b B6Ng01-324G23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttagctctatgtaagaacagctaatgaaaaatagattccatg
aactagaaaaagaataagtagggccataaaggtgggtttggggagaggga
aaaagggggaggggaaatgatataattataatataatcatgaaaagtata
ataaataatttcaaaaaacattcattaaagaatgaagtatgatataagca
gtgctttctattcactgaacaaataaacattaatggagtgcttgctcact
aatgggatgctaaaaaatggaaaccaaatgctgattaatgaactgttagg
aaacagtactgacagtgggcagatcacagagatggcaaaaccctgtcaaa
ggctaccttgtcttagatgccttctctagtcccaaaataaaatggcttgg
ttctataacatgtaccaaaaaaaaaaaaaaaaacccaaaaacaaaaaaca
aaaaacaaaaaaaaccaaacaaacaaaaaaacaaaaccaaaatcaaacat
ataatcatataatgtatttggtaggtagaagaagttatctattttgcttc
actgtcacaatttatgagaattatattgtactcagtaacttgggtataat
aatatttttgcttaaaaacatctttcaaatttttactaaaattcttttta
gaaatatagatgaaagttttgtgatacatcaaacctttaatctagatctc
aaatttggagctttccttaagtatctatattctctaaatgtttgtaaaaa
taagaattattaataaaaatttctattctaaaattaataatctgttaatt
cataacagaatcttatggttatagggtagtatacttattcattaatgcaa
aagaataaatcttcatgaatctgattcataacaaatcacaccaatagtca
atagtttggaagagacatgtggggtcttttgagtatacccctgcctgatt
caataattaaccagtgttgtcaatatgaacacaactgatacaataagata
ataaattattgagcacataccacattttgtatccttttatcattgggaag
acgcaatttcaaagccatgttaatagaacatacatttaaattgataacat
ccaaaatagcccataaaaagtcgatttgcctttattataccaataacctt
acagtgctcaatgaagatctatctccattcagaagc
gaattccaggaaaacacaacacaacaggtgacagaattgaacaaaaccat
tcaagacctaaaaaaggaagtagaaatgataaagaaaacccaaagtgagg
caactttggagatagaaaccctgagaaagtaataagggaccatagatgtg
agcattagcaacagaatacaagagatagaagagagaatttcaggtgcaga
agattccatagggaacatggacacaacaatcaaagaaaatacaaaatgca
aaaagatccgaactcaaaacatccaggaaagctaggacacaatgagaaga
ccaaacctactgataatagtagtagataagaaggaagattttcaacttat
aggggcagaaaatattataatctataattcaacaaaattatagaagaaaa
cttcccaaacctaaagaaagagatgccctagaacatacaagaagcctaca
gaattccaaatagactggacaagaaaagaaattcctcctgaaacataata
atcagaacaacaaatgcactatgtaaaggcagtatattaaaagcagtaat
ggaaaaaggacaagtaacatataaaggcaggcctattagaataacaccag
acttctcaccagagactatgaaagccagaagatcctggacacatgttata
tagaccttaagagaacacagatgccagccgaggctacaatatccagcaaa
acactcaattaccatagatggagaaaccaaagtattccatgacaaaacca
cattcacacaatatctttccactattcaaccccttcaaaggataataaca
ggaaaataacaacacaagaatggaatctataccctagaaaaagcaagaag
taatccttcaacaaacctgaaagaagacagccacaagaatagaatccaac
tttaacaacaaaaataacaggaagcaacaattacttttctttaatttttc
ttaacatcaatggacttgattctccataaaaagacataccacacatggga
caacacatcaagaaataccaaaatgcaaaaggatccgatagactgggcta
caaaaaccaggaccacaccattttgctgcctacagggaaccactcaaggg
taaaagacaacactactttcagagtggaagggctggaaacatttcaggca
attgtcctaagaaacaagctgggaagagtagcccaaattctctctaaata
ttactcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_38786639_38787826
seq2: B6Ng01-324G23.b_42_1227 (reverse)

seq1  GCTTCTGAAT-GAGATAAATTTTAAATTTTTAGCACTTGTAAGTGTTATT  49
      |||||||||| |||||| || || |   || ||||| |||||| |||| |
seq2  GCTTCTGAATGGAGATAGATCTTCA---TTGAGCAC-TGTAAG-GTTA-T  44

seq1  TGGTATAATTTAAAGCCAAAATTCGATTTTTTAT-GGCTATTTT-GATGT  97
      ||||||||  ||||| ||||  |||| ||||||| ||||||||| |||||
seq2  TGGTATAA--TAAAGGCAAA--TCGACTTTTTATGGGCTATTTTGGATGT  90

seq1  TATCAATTTTAATGTATG-TCTATT-ACATGCTTTTGGAATTTGCGTCTT  145
      ||||||||| |||||||| |||||| |||||  ||| ||| |||||||||
seq2  TATCAATTTAAATGTATGTTCTATTAACATGGCTTT-GAAATTGCGTCTT  139

seq1  -CCAATGATAAAA-GATACAAAATGTGTTATGTGCTCAATAATTATTTAT  193
       |||||||||||| ||||||||||||| ||||||||||||||||  ||||
seq2  CCCAATGATAAAAGGATACAAAATGTGGTATGTGCTCAATAATTTATTAT  189

seq1  CTTATTGTATCAGTTGTGTTCATATTGACAACACTGGTTAATAATTGAAT  243
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTTATTGTATCAGTTGTGTTCATATTGACAACACTGGTTAATTATTGAAT  239

seq1  CAGGCAGGGGTATACTCAAAAGACCCCACATGTCTCTTCC-AACTATTGA  292
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CAGGCAGGGGTATACTCAAAAGACCCCACATGTCTCTTCCAAACTATTGA  289

seq1  CTATTGGTGTGATTTGTTATGAATCAGATTCATGAAGATTTATTCTTTTG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGGTGTGATTTGTTATGAATCAGATTCATGAAGATTTATTCTTTTG  339

seq1  CATTAATGAATAAGTATACTA-CCTATAACCATAAGATTCTGTTATGAAT  391
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CATTAATGAATAAGTATACTACCCTATAACCATAAGATTCTGTTATGAAT  389

seq1  TAACAGATTATTAATTTTAGAATAGAAATTTTTATTAATAATTCTTATTT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGATTATTAATTTTAGAATAGAAATTTTTATTAATAATTCTTATTT  439

seq1  TTACAAACATTTAGAGAATATAGATACTTAAGGAAAGCTCCAAATTTGAG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAACATTTAGAGAATATAGATACTTAAGGAAAGCTCCAAATTTGAG  489

seq1  ATCTAGATTAAAGGTTTGATGTATCACAAAACTTTCATCTATATTTCTAA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGATTAAAGGTTTGATGTATCACAAAACTTTCATCTATATTTCTAA  539

seq1  AAAGAATTTTAGTAAAAATTTGAAAGATGTTTTTAAGCAAAAATATTATT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATTTTAGTAAAAATTTGAAAGATGTTTTTAAGCAAAAATATTATT  589

seq1  ATACCCAAGTTACTGAGTACAATATAATTCTCATAAATTGTGACAGTGAA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCAAGTTACTGAGTACAATATAATTCTCATAAATTGTGACAGTGAA  639

seq1  GCAAAATAGATAACTTCTTCTACCTACCAAATACATTATATGATTATATG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATAGATAACTTCTTCTACCTACCAAATACATTATATGATTATATG  689

seq1  TTTGATTTTGGTTTTGTTTTTTTGTTTGTTTGGTTTTTTTTGTTTTTTGT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTTTGGTTTTGTTTTTTTGTTTGTTTGGTTTTTTTTGTTTTTTGT  739

seq1  TTTTTGTTTTTGGGTTTTTTTTTTTTTTTTTGGTACATGTTATAGAACCA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTTGGGTTTTTTTTTTTTTTTTTGGTACATGTTATAGAACCA  789

seq1  AGCCATTTTATTTTGGGACTAGAGAAGGCATCTAAGACAAGGTAGCCTTT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTTTATTTTGGGACTAGAGAAGGCATCTAAGACAAGGTAGCCTTT  839

seq1  GACAGGGTTTTGCCATCTCTGTGATCTGCCCACTGTCAGTACTGTTTCCT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGTTTTGCCATCTCTGTGATCTGCCCACTGTCAGTACTGTTTCCT  889

seq1  AACAGTTCATTAATCAGCATTTGGTTTCCATTTTTTAGCATCCCATTAGT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTCATTAATCAGCATTTGGTTTCCATTTTTTAGCATCCCATTAGT  939

seq1  GAGCAAGCACTCCATTAATGTTTATTTGTTCAGTGAATAGAAAGCACTGC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGCACTCCATTAATGTTTATTTGTTCAGTGAATAGAAAGCACTGC  989

seq1  TTATATCATACTTCATTCTTTAATGAATGTTTTTTGAAATTATTTATTAT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCATACTTCATTCTTTAATGAATGTTTTTTGAAATTATTTATTAT  1039

seq1  ACTTTTCATGATTATATTATAATTATATCATTTCCCCTCCCCCTTTTTCC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCATGATTATATTATAATTATATCATTTCCCCTCCCCCTTTTTCC  1089

seq1  CTCTCCCCAAACCCACCTTTATGGCCCTACTTATTCTTTTTCTAGTTCAT  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCCAAACCCACCTTTATGGCCCTACTTATTCTTTTTCTAGTTCAT  1139

seq1  GGAATCTATTTTTCATTAGCTGTTCTTACATAGAGCTAAGTGAATTC  1188
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCTATTTTTCATTAGCTGTTCTTACATAGAGCTAAGTGAATTC  1186