BAC Information

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BAC

Clone NameB6Ng01-328D02
Chromosome9 (Build37)
Map Location 117,900,202 - 117,900,783
singlet/doubletsinglet
Overlap geneLOC100039681
Upstream geneRbms3, LOC665840, LOC100039650
Downstream geneAzi2, 2010110K16Rik, Eomes, Golga4, Itga9, LOC100039768, Ctdspl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328D02.bB6Ng01-328D02.g
ACCGA115523GA115524
length5761,141
definitionB6Ng01-328D02.b B6Ng01-328D02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ttacttgatatattactatggactcaaaagttatatttacaggcagggaa
atcagaagaaaacgatgagtcattgagctgacttctgaagagatttcaag
aagctcactaccacaagaaaagaaagaacagttagttttgttcccacact
taggagatccaatgcatgtttcaaggttctatgaactctctcacacacac
atacaccacaaataaaaataattttaaaatgatcttttaaacaattccag
gggaatactattccctcttttggccttttgggtactggagtcatttgcac
atacccacacataggcacacacacatatgcataatctaaaattatgtgta
ttaaataagtctttagaatgattctttaaagggtacaaatgaaaggcaga
gaactggaaaatgctcatgaacaatagtcatgactactgtcttctgatct
tcctttcaggttgtttatagttagtgaatagcaatgcaactggcatctgg
atgttgattgtttcctgcgctttgcttaattcatgtttgttatttatgtg
tgtgtgtgtgtgtgtgtgtgtgtgtg

gaattcctgatctttcaaagacttttatcatgaatgggtgttggattttg
tcatatgctttctccacatttaacgagatgatcatgtggcttttgtcttt
gagtttgtttatatagtggattacgttgatgcatttctgtatattaaacc
atccctgcatacctggaatgaaacctacttggtcaggatggatgattgtt
ttgatgtggtcttggattcggttagcgagaattttattgaggatttttgc
atcgatatttacaagggaaattggtctgaagtattctatctttgttgggt
ctttctgtggtttaggtatcagagtaattgtggcttcatagaatgagttg
ggtagagtaccttctacttctattttgtggaatagtttgtgtagaactgg
aattagatcttctatgaaggtctgatagaactctgcactaaacctatctg
gtcctggcctttttttggttgggagactattaatgactgcttctatttct
ttagggtatatgggactgtttagatcgttaacttgatcctgatttaactt
tggtacctggtatctgtctagatatttgtccatttcttccaggttttcca
gttttgttgagtacagccttttgtataaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctctcttttcatttctgattttgttaat
taggatgctgtccctgtgccctctagtgagtctggctaagggtttatcta
tcttgttgattttctcaaagaaccagctcctcctttggttgattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccctctactcctcttgggtgaatttgctttctttttttctagag
cttttaggtgtgttgtcaagctgctagtgtgtgctctctctagtttcttt
ttggaggcactcagagtcatgagttttcctctagaaatgctttcattgtg
tcccataagtttggggtatgctgttgactcatttcgttaaacctgttgaa
ggtcttaattctttcttaattccttccttgaccaaggatcattggaagag
tgtatgtcagctttccaccgggaatgtgggcctctacttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_117900202_117900783
seq2: B6Ng01-328D02.b_44_625

seq1  GAATTCTTACTTGATATATTACTATGGACTCAAAAGTTATATTTACAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTTGATATATTACTATGGACTCAAAAGTTATATTTACAGGC  50

seq1  AGGGAAATCAGAAGAAAACGATGAGTCATTGAGCTGACTTCTGAAGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAATCAGAAGAAAACGATGAGTCATTGAGCTGACTTCTGAAGAGAT  100

seq1  TTCAAGAAGCTCACTACCACAAGAAAAGAAAGAACAGTTAGTTTTGTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGAAGCTCACTACCACAAGAAAAGAAAGAACAGTTAGTTTTGTTCC  150

seq1  CACACTTAGGAGATCCAATGCATGTTTCAAGGTTCTATGAACTCTCTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTAGGAGATCCAATGCATGTTTCAAGGTTCTATGAACTCTCTCAC  200

seq1  ACACACATACACCACAAATAAAAATAATTTTAAAATGATCTTTTAAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATACACCACAAATAAAAATAATTTTAAAATGATCTTTTAAACAA  250

seq1  TTCCAGGGGAATACTATTCCCTCTTTTGGCCTTTTGGGTACTGGAGTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGGGAATACTATTCCCTCTTTTGGCCTTTTGGGTACTGGAGTCAT  300

seq1  TTGCACATACCCACACATAGGCACACACACATATGCATAATCTAAAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACATACCCACACATAGGCACACACACATATGCATAATCTAAAATTA  350

seq1  TGTGTATTAAATAAGTCTTTAGAATGATTCTTTAAAGGGTACAAATGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATTAAATAAGTCTTTAGAATGATTCTTTAAAGGGTACAAATGAAA  400

seq1  GGCAGAGAACTGGAAAATGCTCATGAACAATAGTCATGACTACTGTCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGAACTGGAAAATGCTCATGAACAATAGTCATGACTACTGTCTTC  450

seq1  TGATCTTCCTTTCAGGTTGTTTATAGTTAGTGAATAGCAATGCAACTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTCCTTTCAGGTTGTTTATAGTTAGTGAATAGCAATGCAACTGGC  500

seq1  ATCTGGATGTTGATTGTTTCCTGCGCTTTGCTTAATTCATGTTTGTTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGATGTTGATTGTTTCCTGCGCTTTGCTTAATTCATGTTTGTTATT  550

seq1  TATGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  582
      ||||||||||||||||||||||||||||||||
seq2  TATGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  582


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