BAC Information

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BAC

Clone NameB6Ng01-329H11
Chromosome9 (Build37)
Map Location 22,344,346 - 22,504,157
singlet/doubletdoublet
Overlap geneBbs9
Upstream geneAB124611, Carm1, Yipf2, 1810026J23Rik, EG666043, Smarca4, Ldlr, Spc24, Ankrd25, Dock6, EG624219, Rab3d, BC010787, 2510048L02Rik, BC018242, 2310047B19Rik, Epor, Rgl3, C330001K17Rik, Prkcsh, Elavl3, Zfp653, Ecsit, EG625409, Cnn1, Elof1, Acp5, Pigyl, LOC100034724, 9530015I07Rik, 1810064F22Rik, Zfp809, BC050092, Zfp810, LOC100041826, EG625603, Anln, 9530077C05Rik, rp9, LOC100041870, LOC100040805
Downstream geneBmper
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329H11.bB6Ng01-329H11.g
ACCGA116421GA116422
length1,1531,163
definitionB6Ng01-329H11.b B6Ng01-329H11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,503,005 - 22,504,157)(22,344,346 - 22,345,517)
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatcttttggtggtct
ttttgtcttattgacggtgtcttttgccttgcaattttttttaattttat
tggctatttatttcatttacattttacaaaggagtatgccaccagagtgg
cttcaatttaactcataacagtgaaatgactaaatcatttttcattattc
tctacctggagagaaagaaagttaaaatggctgaggacagagcatttgaa
ggcatcaggtgctttagaaatgctgggctgcccacaccttaactttggaa
actttgtcttagctagactagcaggtgactaccagctacagacactgtca
gctatcccattgcctagtgttgataatgaaatgtccaaaaacattaattc
acttaaaaaaaacttaatttttcttccttgctgcttggtgtacactgtct
attaaataatattaactgctagtcagcagcccttaaacaatttctgcttt
agaatgctttataatattgcgcctagtccttgattaggacactcatggga
aaatgtgcttaaaaaaataaatgtaacctaactgctatgtagcaaataac
ttatctcacctgagacaagtgtaaagttttcaaatgtctctagcttcttt
aacatgggaaagatgatgggacctatccttgttccaaggtaattactttg
taagcacgaaggtatcataaaaattccacagtgacaaaacagagtgctga
aacaacttgataatgaaatgcagccacagtggtggtggaagactgcccac
agtacctacagtgcctgctcagttccaggagtgggaacagcaaacagact
tgtaaaggagagttcatgtctcattagcaaaataatttgtcttgccccag
agaaaaatccctggcagaatggaggcaaagtctccagcacctcccagaca
aaagacagcttcctggaagaccagtgcctcccacaagcaaggtgacaagc
acctcccagccgtggggactgacctgcacttccagctcttgtgcttggta
ccc
gaattcagtctctgacaggagaagaagtgggttgaccagaagtacaaagg
aactggttgccactcacacagaacttagatcagcatgaggtctgtgggtg
tgcacattccatgtcttcctgtgggcaaagtggctctctgtgggacctgt
gcacatctgcattggtcagtatttcaggtgcaggaagatgagctaatctt
tgaaggaaatgaaattgaacttgtttcaaattcagctactttgattcagc
aagctatagtgattaataaggatattgaaacgtttgggtagtgtctgtga
ctctaaacaggaagtttctcaggctgatgaatgtgaactgagctgcatag
ccacagaaataaagctgtgaactgtaggactagtttgtgatattttgatg
attcaataacggagttccaggtgctggggtagaaagccctactggatgaa
tgctgacagatgctgtgcactgtttggtaggcctcatgtgatcaactgct
ttgactggttgagtgcattctttaagtgtgtcctccgtgtcaggcacttc
actggtgtctgctaactgcactgtattttatagatgaggaatgaagatgt
caagcattccctcccgggcacctgctggtgagtgactgactacacacttt
cacctcggtgtttttcacagttggggactcatcagaaacagcatctgaaa
gttaggtttcgtggcatgattagaagaaaaggacacttctctgttgaggt
atgctcagaagggggaccagagatctgttgctgtgattctaggctgcccg
atgtgcagagggacccatacagggtttacatttctgtctgggtttttgtg
atctgactgagtgccatctttgtactgatccctgtatgtgtgcaatacac
atttgtgtccttaaatgcactcttgcagtgtgtagcatatcatgttatta
cacatgaagatacttctctggtgagttgtctctcttctgagacagctctc
tttatagtcctggcaggattctttgctgtgtagaccagggtgactttgac
tccacaggatcgctgcctcttgtcgttggttaagcatgctctctgtgatt
ttccttagtttctgtgagtgcaggatgtgatattcctcttggagatggtg
ctatatttaccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_22503005_22504157
seq2: B6Ng01-329H11.b_44_1196 (reverse)

seq1  GGGTACCCAGCAC-AGAGCTGGGAGTGCA-GTCAGTCCCCACGGGCTGGG  48
      ||||||| ||||| |||||||| |||||| |||||||||||| |||||||
seq2  GGGTACCAAGCACAAGAGCTGGAAGTGCAGGTCAGTCCCCAC-GGCTGGG  49

seq1  AGGTGCTTGTCACC-TGCTTGTGGGAGGCACTGGTCTTCCAGGGAAGCTG  97
      |||||||||||||| |||||||||||||||||||||||||| ||||||| 
seq2  AGGTGCTTGTCACCTTGCTTGTGGGAGGCACTGGTCTTCCA-GGAAGCT-  97

seq1  GTCTTTTGTCTGGGAGGTGCTGGAGACTTTGCCTTCCATTTCTGCCAGGG  147
      ||||||||||||||||||||||||||||||||| |||| |||||||||||
seq2  GTCTTTTGTCTGGGAGGTGCTGGAGACTTTGCC-TCCA-TTCTGCCAGGG  145

seq1  A-TTTTCTCTGGGGCAAGAC-AATTATTTTGCTAATGAGACATGAACTCT  195
      | |||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATTTTTCTCTGGGGCAAGACAAATTATTTTGCTAATGAGACATGAACTCT  195

seq1  CCTTTACAAGTCTGTTTGCTGTTCCCACTCCTGGAACTGAGCAGGCACTG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTACAAGTCTGTTTGCTGTTCCCACTCCTGGAACTGAGCAGGCACTG  245

seq1  TAGGTACTGTGGGCAGTCTTCCACCACCACTGTGGCTGCATTTCATTATC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTACTGTGGGCAGTCTTCCACCACCACTGTGGCTGCATTTCATTATC  295

seq1  AAGTTGTTTCAGCACTCTGTTTTGTCACTGTGGAATTTTTATGATACCTT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTTTCAGCACTCTGTTTTGTCACTGTGGAATTTTTATGATACCTT  345

seq1  CGTGCTTACAAAGTAATTACCTTGGAACAAGGATAGGTCCCATCATCTTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCTTACAAAGTAATTACCTTGGAACAAGGATAGGTCCCATCATCTTT  395

seq1  CCCATGTTAAAGAAGCTAGAGACATTTGAAAACTTTACACTTGTCTCAGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGTTAAAGAAGCTAGAGACATTTGAAAACTTTACACTTGTCTCAGG  445

seq1  TGAGATAAGTTATTTGCTACATAGCAGTTAGGTTACATTTATTTTTTTAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATAAGTTATTTGCTACATAGCAGTTAGGTTACATTTATTTTTTTAA  495

seq1  GCACATTTTCCCATGAGTGTCCTAATCAAGGACTAGGCGCAATATTATAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTTTCCCATGAGTGTCCTAATCAAGGACTAGGCGCAATATTATAA  545

seq1  AGCATTCTAAAGCAGAAATTGTTTAAGGGCTGCTGACTAGCAGTTAATAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCTAAAGCAGAAATTGTTTAAGGGCTGCTGACTAGCAGTTAATAT  595

seq1  TATTTAATAGACAGTGTACACCAAGCAGCAAGGAAGAAAAATTAAGTTTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAATAGACAGTGTACACCAAGCAGCAAGGAAGAAAAATTAAGTTTT  645

seq1  TTTTAAGTGAATTAATGTTTTTGGACATTTCATTATCAACACTAGGCAAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGTGAATTAATGTTTTTGGACATTTCATTATCAACACTAGGCAAT  695

seq1  GGGATAGCTGACAGTGTCTGTAGCTGGTAGTCACCTGCTAGTCTAGCTAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAGCTGACAGTGTCTGTAGCTGGTAGTCACCTGCTAGTCTAGCTAA  745

seq1  GACAAAGTTTCCAAAGTTAAGGTGTGGGCAGCCCAGCATTTCTAAAGCAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGTTTCCAAAGTTAAGGTGTGGGCAGCCCAGCATTTCTAAAGCAC  795

seq1  CTGATGCCTTCAAATGCTCTGTCCTCAGCCATTTTAACTTTCTTTCTCTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGCCTTCAAATGCTCTGTCCTCAGCCATTTTAACTTTCTTTCTCTC  845

seq1  CAGGTAGAGAATAATGAAAAATGATTTAGTCATTTCACTGTTATGAGTTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAGAGAATAATGAAAAATGATTTAGTCATTTCACTGTTATGAGTTA  895

seq1  AATTGAAGCCACTCTGGTGGCATACTCCTTTGTAAAATGTAAATGAAATA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAAGCCACTCTGGTGGCATACTCCTTTGTAAAATGTAAATGAAATA  945

seq1  AATAGCCAATAAAATTAAAAAAAATTGCAAGGCAAAAGACACCGTCAATA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCCAATAAAATTAAAAAAAATTGCAAGGCAAAAGACACCGTCAATA  995

seq1  AGACAAAAAGACCACCAAAAGATTGGGAAAGGATCTTTACCTATCCTAAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAAAGACCACCAAAAGATTGGGAAAGGATCTTTACCTATCCTAAA  1045

seq1  TCAGATAGGGGACTAATATCCAATATATATAAAGAACTCAAGAAGGTGGA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATAGGGGACTAATATCCAATATATATAAAGAACTCAAGAAGGTGGA  1095

seq1  CTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAAACA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAAACA  1145

seq1  AAGAATTC  1153
      ||||||||
seq2  AAGAATTC  1153

seq1: chr9_22344346_22345517
seq2: B6Ng01-329H11.g_63_1225

seq1  GAATTCAGTCTCTGACAGGAGAAGAAGTGGGTTGACCAGAAGTACAAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTCTGACAGGAGAAGAAGTGGGTTGACCAGAAGTACAAAGG  50

seq1  AACTGGTTGCCACTCACACAGAACTTAGATCAGCATGAGGTCTGTGGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGTTGCCACTCACACAGAACTTAGATCAGCATGAGGTCTGTGGGTG  100

seq1  TGCACATTCCATGTCTTCCTGTGGGCAAAGTGGCTCTCTGTGGGACCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATTCCATGTCTTCCTGTGGGCAAAGTGGCTCTCTGTGGGACCTGT  150

seq1  GCACATCTGCATTGGTCAGTATTTCAGGTGCAGGAAGATGAGCTAATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATCTGCATTGGTCAGTATTTCAGGTGCAGGAAGATGAGCTAATCTT  200

seq1  TGAAGGAAATGAAATTGAACTTGTTTCAAATTCAGCTACTTTGATTCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGAAATGAAATTGAACTTGTTTCAAATTCAGCTACTTTGATTCAGC  250

seq1  AAGCTATAGTGATTAATAAGGATATTGAAACGTTTGGGTAGTGTCTGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATAGTGATTAATAAGGATATTGAAACGTTTGGGTAGTGTCTGTGA  300

seq1  CTCTAAACAGGAAGTTTCTCAGGCTGATGAATGTGAACTGAGCTGCATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAACAGGAAGTTTCTCAGGCTGATGAATGTGAACTGAGCTGCATAG  350

seq1  CCACAGAAATAAAGCTGTGAACTGTAGGACTAGTTTGTGATATTTTGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGAAATAAAGCTGTGAACTGTAGGACTAGTTTGTGATATTTTGATG  400

seq1  ATTCAATAACGGAGTTCCAGGTGCTGGGGTAGAAAGCCCTACTGGATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATAACGGAGTTCCAGGTGCTGGGGTAGAAAGCCCTACTGGATGAA  450

seq1  TGCTGACAGATGCTGTGCACTGTTTGGTAGGCCTCATGTGATCAACTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGACAGATGCTGTGCACTGTTTGGTAGGCCTCATGTGATCAACTGCT  500

seq1  TTGACTGGTTGAGTGCATTCTTTAAGTGTGTCCTCCGTGTCAGGCACTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTGGTTGAGTGCATTCTTTAAGTGTGTCCTCCGTGTCAGGCACTTC  550

seq1  ACTGGTGTCTGCTAACTGCACTGTATTTTATAGATGAGGAATGAAGATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTGTCTGCTAACTGCACTGTATTTTATAGATGAGGAATGAAGATGT  600

seq1  CAAGCATTCCCTCCCGGGCACCTGCTGGTGAGTGACTGACTACACACTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATTCCCTCCCGGGCACCTGCTGGTGAGTGACTGACTACACACTTT  650

seq1  CACCTCGGTGTTTTTCACAGTTGGGGACTCATCAGAAACAGCATCTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCGGTGTTTTTCACAGTTGGGGACTCATCAGAAACAGCATCTGAAA  700

seq1  GTTAGGTTTCGTGGCATGATTAGAAGAAAAGGACACTTCTCTGTTGAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGTTTCGTGGCATGATTAGAAGAAAAGGACACTTCTCTGTTGAGGT  750

seq1  ATGCTCAGAAGGGGGACCAGAGATCTGTTGCTGTGATTCTAGGCTGCCCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCAGAAGGGGGACCAGAGATCTGTTGCTGTGATTCTAGGCTGCCCG  800

seq1  ATGTGCAGAGGGACCCATACAGGGTTTACATTTCTGTCTGGGTTTTTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCAGAGGGACCCATACAGGGTTTACATTTCTGTCTGGGTTTTTGTG  850

seq1  ATCTGACTGAGTGCCATCTTTGTACTGATCCCTGTATGTGTGCAATACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGACTGAGTGCCATCTTTGTACTGATCCCTGTATGTGTGCAATACAC  900

seq1  ATTTGTGTCCTTAAATGCACTCTTGCAGTGTGTAGCATATCATGTTTATT  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATTTGTGTCCTTAAATGCACTCTTGCAGTGTGTAGCATATCATG-TTATT  949

seq1  ACACATGAAGATACTTCTCTGGTGAGTTGTCTTCTCTTCTGAGACAGGCT  1000
      ||||||||||||||||||||||||||||||| |||||||||||||| |||
seq2  ACACATGAAGATACTTCTCTGGTGAGTTGTC-TCTCTTCTGAGACA-GCT  997

seq1  CTCTTTATAGTCCTGGCAGGAT--CTTGCTGTGTAGACCAGGGTGGCCTT  1048
      ||||||||||||||||||||||   |||||||||||||||||||| | ||
seq2  CTCTTTATAGTCCTGGCAGGATTCTTTGCTGTGTAGACCAGGGTGACTTT  1047

seq1  GAACTCACAGGGATCGCCTGCCTC-TGTCGTTGGTTAAAGGCATGCTCTC  1097
      ||   |||| |||||| ||||||| |||||||||||||  ||||||||||
seq2  GACTCCACA-GGATCG-CTGCCTCTTGTCGTTGGTTAA--GCATGCTCTC  1093

seq1  TGGTGATTTTCCTGTGTTTTTTTGTTGTAGTGTGGAAGAATGTGATATAT  1147
      | |||||||||||  |||| | ||    |||   | || |||||  ||||
seq2  T-GTGATTTTCCTTAGTTTCTGTG----AGT---GCAGGATGTG--ATAT  1133

seq1  TCCTCTGGGA-----TGTGTTATTTACCTA  1172
      |||||| |||     ||   ||||||||||
seq2  TCCTCTTGGAGATGGTGCTATATTTACCTA  1163