BAC Information

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BAC

Clone NameB6Ng01-345E22
Chromosome9 (Build37)
Map Location 99,532,631 - 99,533,705
singlet/doubletsinglet
Overlap geneDzip1l
Upstream geneEG623166, EG623186, 2410012M07Rik, LOC546155, LOC100040370, 7420426K07Rik, LOC100040380, LOC667347, Foxl2os, Foxl2, Faim, Gm1123, Pik3cb, LOC100040442, LOC100040757, EG623459, Cep70, D9Ertd280e, Mras, LOC623534, Armc8, Dbr1, A4gnt
Downstream geneCldn18, EG667429, Sox14, LOC667456, 4930519F24Rik, LOC100040590, Il20rb, Nck1, LOC633385, Tmem22, LOC667486
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345E22.bB6Ng01-345E22.g
ACCGA127548GA127549
length1,0801,179
definitionB6Ng01-345E22.b B6Ng01-345E22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ggaattcaggtgagcagaagagcctcgaagcttctgggatttgtttcccc
atgggacgggtgacttgggaggtagtcaacaactgcctgttggagagtgg
aattgctgcagggggcagtgaacgctctcagtaatggagcaggcatgctc
actagcgcaaagctccgtttgaatcactaactcagcataaagtaggagta
gggagtttcgctggaccccgtcaagacctgtagaggcaggtaagagcctc
agctttcctaatgacggtgaatcatctctgccttgtgttcctagtcccac
atgtggggaaacagtctgctgataactcagtttggagaaggctggcattc
ctgcccctggggtgcgtggtttcttggtaaccagcaacatagtcatgtgg
ctttgtcttttacccatacctaccaggaagccagctttgtagctgagata
cactgaggctttattgtctccagcactggccctgtcatgatttgccgtga
accctggcagcccctccattctgcacgagaattctcaggtatttacacaa
tgaaacaatcttgtatcattcctacaccacctctgccattgttgggaggg
cggtcagtatgactgggatttgtggagtcagacagaaatagcatctttta
attctggtgctgcctggtgtggtggcgaatgcctttaatcccagcacttg
ggaggcagaggcagttggatttctgagttcgaggccagcctggtctacaa
agtgagttccaggacagccagagctatacagaaagaccctgtctcgaaaa
aacaaaaacaataaagtctggtgctgagcctggcatgtaggcgcttgata
aatgatagctgctttcctcagatcatcatctataggaattcccaccctcc
tcgtctaccctttgaagccagaagcccagactttccaggaaaccaaacct
aacccaagggcttaggaatcatttgctgacatggaacccgagtgcttcat
gcctctggggtcccagagaggagccagggaaatctgggacactggtgaca
gtcaagatgaccagagcttgagcacgtgtc
gaattcagtgcccacataaagaattattagataggctggagaggtggctc
agtggataagagcactgactgctcttcaggaagtcctgaattcaaatccc
agcaacacatggtggctcacaaccatctgtaatgggatccaataccctct
tctgatgtgtctgaagagagcaacagtatactcacattaaatacatatat
atatatatattcgatctcaaataaatgacttatgatgcactttaaaacat
tcaaaaaacacaaaagtagtagataggaagatgtaattaagataggaaat
tcataaaatagaagtgaaacttaaaaaaaaacaatatgaagaatcaatga
aaaattccttgaaaagataaacaggaccagtaaacccttagccaatttca
ccaaaagtaacaaagataaaacccaagttaacaaaattagaggtgaaaat
ggagacataacaagagataccaatgaaatccaaaaaaaggccatgcttta
aaatgtaaattcctctaagttagaaaatataaaagaaatagatgaatttc
tagaatctagaagcctacgacctacccaaaattagattaaaatgagatag
gtaacttaaacagacctatactaacaacgagactaactcagtaaaaagtc
tcccaaccaattaaaacagaagtttacagccaacatcacaatgagtggag
aaaatcctcaaagtattctcactaagatcaggaccaaagtgaattcattc
tcgtcactcatccaatacggtgctcaaagtcttgactcacagcaatatga
caagagaaagcaacagaaaggatacaggtaagaagagaagagattaaaga
gtctcttttttcatatttccatacagaagaaactcctaaggactccactc
aaaaaacaacttcttaaaatctaataaacatttttggcaaagtggcaaca
tacaaaatttaataatacccataactgtagcttttctaaacaccaggaca
ggcacactgaaaaagaaatcagcaaagcaatttccaaaagaaaaagaaaa
agaaaagattctgaaaatgtgggtcttctgtgtaattcttatggacaata
gagcttcctgaggaagggctgaactgatgcacttatctatggtatattca
gtaaggtatttaaggagtccaattctcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_99532631_99533705
seq2: B6Ng01-345E22.b_52_1130

seq1  GAATTCAGGTGAGCAGAAGAGCCTCGAAGCTTCTGGGATTTGTTTCCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTGAGCAGAAGAGCCTCGAAGCTTCTGGGATTTGTTTCCCCA  50

seq1  TGGGACGGGTGACTTGGGAGGTAGTCAACAACTGCCTGTTGGAGAGTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACGGGTGACTTGGGAGGTAGTCAACAACTGCCTGTTGGAGAGTGGA  100

seq1  ATTGCTGCAGGGGGCAGTGAACGCTCTCAGTAATGGAGCAGGCATGCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGCAGGGGGCAGTGAACGCTCTCAGTAATGGAGCAGGCATGCTCA  150

seq1  CTAGCGCAAAGCTCCGTTTGAATCACTAACTCAGCATAAAGTAGGAGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCGCAAAGCTCCGTTTGAATCACTAACTCAGCATAAAGTAGGAGTAG  200

seq1  GGAGTTTCGCTGGACCCCGTCAAGACCTGTAGAGGCAGGTAAGAGCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTCGCTGGACCCCGTCAAGACCTGTAGAGGCAGGTAAGAGCCTCA  250

seq1  GCTTTCCTAATGACGGTGAATCATCTCTGCCTTGTGTTCCTAGTCCCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCTAATGACGGTGAATCATCTCTGCCTTGTGTTCCTAGTCCCACA  300

seq1  TGTGGGGAAACAGTCTGCTGATAACTCAGTTTGGAGAAGGCTGGCATTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGAAACAGTCTGCTGATAACTCAGTTTGGAGAAGGCTGGCATTCC  350

seq1  TGCCCCTGGGGTGCGTGGTTTCTTGGTAACCAGCAACATAGTCATGTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTGGGGTGCGTGGTTTCTTGGTAACCAGCAACATAGTCATGTGGC  400

seq1  TTTGTCTTTTACCCATACCTACCAGGAAGCCAGCTTTGTAGCTGAGATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTTTACCCATACCTACCAGGAAGCCAGCTTTGTAGCTGAGATAC  450

seq1  ACTGAGGCTTTATTGTCTCCAGCACTGGCCCTGTCATGATTTGCCGTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGCTTTATTGTCTCCAGCACTGGCCCTGTCATGATTTGCCGTGAA  500

seq1  CCCTGGCAGCCCCTCCATTCTGCACGAGAATTCTCAGGTATTTACACAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCAGCCCCTCCATTCTGCACGAGAATTCTCAGGTATTTACACAAT  550

seq1  GAAACAATCTTGTATCATTCCTACACCACCTCTGCCATTGTTGGGAGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAATCTTGTATCATTCCTACACCACCTCTGCCATTGTTGGGAGGGC  600

seq1  GGTCAGTATGACTGGGATTTGTGGAGTCAGACAGAAATAGCATCTTTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGTATGACTGGGATTTGTGGAGTCAGACAGAAATAGCATCTTTTAA  650

seq1  TTCTGGTGCTGCCTGGTGTGGTGGCGAATGCCTTTAATCCCAGCACTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTGCTGCCTGGTGTGGTGGCGAATGCCTTTAATCCCAGCACTTGG  700

seq1  GAGGCAGAGGCAGTTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAGGCAGTTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAA  750

seq1  GTGAGTTCCAGGACAGCCAGAGCTATACAGAAAGACCCTGTCTCGAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTCCAGGACAGCCAGAGCTATACAGAAAGACCCTGTCTCGAAAAA  800

seq1  ACAAAAACAATAAAGTCTGGTGCTGAGCCTGGCATGTAGGCGCTTGATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACAATAAAGTCTGGTGCTGAGCCTGGCATGTAGGCGCTTGATAA  850

seq1  ATGATAGCTGCTTTCCTCAGATCATCATCTATAGGAATTCCCACCCTCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAGCTGCTTTCCTCAGATCATCATCTATAGGAATTCCCACCCTCCT  900

seq1  CGTCTACCCTTTGAAGCCAGAAGCCCCAGAC-TTCCAGG-AACCAAACCT  948
      ||||||||||||||||||||||| ||||||| ||||||| ||||||||||
seq2  CGTCTACCCTTTGAAGCCAGAAG-CCCAGACTTTCCAGGAAACCAAACCT  949

seq1  AACCCAA-GGCTTAGGAATCATTTGCTGACATGG-ACCCGAGTGCTTCAT  996
      ||||||| |||||||||||||||||||||||||| |||||||||||||||
seq2  AACCCAAGGGCTTAGGAATCATTTGCTGACATGGAACCCGAGTGCTTCAT  999

seq1  G-CTCTGGGGTCCCAGAGAAGAGCCA-GGAAATCT-GGACACTGGTGACA  1043
      | ||||||||||||||||| |||||| |||||||| ||||||||||||||
seq2  GCCTCTGGGGTCCCAGAGAGGAGCCAGGGAAATCTGGGACACTGGTGACA  1049

seq1  GTCAAGATGAACAGAGCTTTGAAGCACGTGTC  1075
      |||||||||| ||||||||   ||||||||||
seq2  GTCAAGATGACCAGAGCTT--GAGCACGTGTC  1079