MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-346P15
Chromosome	9 (Build37)
Map Location	83,670,796 - 83,671,047
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Irak1bp1, Phip, LOC100039144, Hmgn3, LOC100039159, 4930431B11Rik, EG619900, LOC100039186, LOC100039200, Sh3bgrl2, LOC100039222
Downstream gene	Elovl4, Ttk, EG546150, Bckdhb, EG666669
Link	Open Mouse BAC browser

Click to get alignment info.

name	Irak1bp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:65099 MGI:1929475
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Phip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83946 MGI:1932404
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039144 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039144
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Hmgn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94353 MGI:2138069
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100039159 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins

name	4930431B11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75782 MGI:1923032
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG619900 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619900 MGI:3643614
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 717 ESTs, 17 Proteins

name	LOC100039186 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039186
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100039200 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039200
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Sh3bgrl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212531 MGI:1915350
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039222 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039222
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Elovl4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83603 MGI:1933331
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22137 MGI:1194921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG546150 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546150 MGI:3645715
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bckdhb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12040 MGI:88137
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666669 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666669 MGI:3643827
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 mRNAs, 1630 ESTs, 12 Proteins

name	Irak1bp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367357 GeneID:65099 MGI:1929475
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin-1 receptor-associated kinase 1 binding protein 1 transcript_id : NM_022986.3

name	Phip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487034 GeneID:83946 MGI:1932404
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology domain interacting protein transcript_id : NM_001081216.1

name	LOC100039144 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260106 GeneID:100039144
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : hypothetical protein LOC100039144 transcript_id : XM_001472344.1

name	Hmgn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41281865 GeneID:94353 MGI:2138069
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : high mobility group nucleosomal binding domain 3 transcript_id : NM_175074.1

name	Hmgn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381310 GeneID:94353 MGI:2138069
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : high mobility group nucleosomal binding domain 3 transcript_id : NM_026122.2

name	LOC100039159 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260108 GeneID:100039159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins product : similar to Ubtf protein transcript_id : XM_001472364.1

name	4930431B11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366770 GeneID:75782 MGI:1923032
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930431B11 gene transcript_id : NM_029434.2

name	4930431B11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68299756 GeneID:75782 MGI:1923032
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930431B11 gene transcript_id : NM_027448.1

name	EG619900 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386273 GeneID:619900 MGI:3643614
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 717 ESTs, 17 Proteins product : predicted gene, EG619900 transcript_id : XM_884518.2

name	Sh3bgrl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363982 GeneID:212531 MGI:1915350
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SH3 domain binding glutamic acid-rich protein like 2 transcript_id : NM_172507.3

name	LOC100039222 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260110 GeneID:100039222
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : hypothetical protein LOC100039222 transcript_id : XM_001472482.1

name	Elovl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22507346 GeneID:83603 MGI:1933331
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4 transcript_id : NM_148941.1

name	Ttk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678462 GeneID:22137 MGI:1194921
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Ttk protein kinase transcript_id : NM_009445.1

name	EG546150 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351417 GeneID:546150 MGI:3645715
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG546150 transcript_id : NM_001024729.2

name	Bckdhb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40353219 GeneID:12040 MGI:88137
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : branched chain ketoacid dehydrogenase E1, beta polypeptide transcript_id : NM_199195.1

name	EG666669 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260112 GeneID:666669 MGI:3643827
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 mRNAs, 1630 ESTs, 12 Proteins product : predicted gene, EG666669 transcript_id : XM_985293.2

name	Irak1bp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560281 CCDS:CCDS23372.1 GeneID:65099 MGI:1929475
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007249 - I-kappaB kinase/NF-kappaB cascade [Evidence IDA] codon_start : 1 exception : mismatches in translation note : ActA binding protein 3 product : interleukin-1 receptor-associated kinase 1 binding protein 1 protein_id : NP_075362.2

name	Phip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487035 GeneID:83946 MGI:1932404
definition	GO_function : GO:0005515 - protein binding [Evidence IDA] GO_process : GO:0008286 - insulin receptor signaling pathway [Evidence IDA] codon_start : 1 note : neuronal differentiation related protein; WD repeat domain 11 product : pleckstrin homology domain interacting protein protein_id : NP_001074685.1

name	LOC100039144 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260107 GeneID:100039144
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472394.1

name	Hmgn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313298 GeneID:94353 MGI:2138069
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003682 - chromatin binding [Evidence ISS] [Evidence IDA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform HMGN3a is encoded by transcript variant 1 product : high mobility group nucleosomal binding domain 3 isoform HMGN3a protein_id : NP_080398.1

name	Hmgn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281866 GeneID:94353 MGI:2138069
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003682 - chromatin binding [Evidence ISS] [Evidence IDA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform HMGN3b is encoded by transcript variant 2 product : high mobility group nucleosomal binding domain 3 isoform HMGN3b protein_id : NP_778249.1

name	LOC100039159 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260109 GeneID:100039159
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472414.1

name	4930431B11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21624625 CCDS:CCDS23373.1 GeneID:75782 MGI:1923032
definition	codon_start : 1 exception : mismatches in translation note : isoform a is encoded by transcript variant 1 product : hypothetical protein LOC75782 isoform a protein_id : NP_083710.1

name	4930431B11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68299757 CCDS:CCDS23374.1 GeneID:75782 MGI:1923032
definition	codon_start : 1 note : isoform b is encoded by transcript variant 2 product : hypothetical protein LOC75782 isoform b protein_id : NP_081724.1

name	EG619900 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82930467 GeneID:619900 MGI:3643614
definition	codon_start : 1 product : similar to fusion protein: ubiquitin (bases 43_513); ribosomal protein S27a (bases 217_532) protein_id : XP_889611.1

name	Sh3bgrl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369694 GeneID:212531 MGI:1915350
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : SH3 domain binding glutamic acid-rich protein like 2 protein_id : NP_766095.1

name	LOC100039222 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260111 GeneID:100039222
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472532.1

name	Elovl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22507347 CCDS:CCDS23376.1 GeneID:83603 MGI:1933331
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006633 - fatty acid biosynthesis [Evidence IEA]; GO:0008610 - lipid biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation function : involved in elongation of fatty acids product : elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4 protein_id : NP_683743.1

name	Ttk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678463 GeneID:22137 MGI:1194921
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005488 - binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : Ttk protein kinase protein_id : NP_033471.1

name	EG546150 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701560 GeneID:546150 MGI:3645715
definition	codon_start : 1 product : hypothetical protein LOC546150 protein_id : NP_001019900.1

name	Bckdhb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40353220 CCDS:CCDS23378.1 GeneID:12040 MGI:88137
definition	GO_component : GO:0005947 - alpha-ketoglutarate dehydrogenase complex (sensu Eukaryota) [Evidence ISS]; GO:0005743 - mitochondrial inner membrane [Evidence TAS]; GO:0005739 - mitochondrion [Evidence ISS] GO_function : GO:0003826 - alpha-ketoacid dehydrogenase activity [Evidence IDA]; GO:0016831 - carboxy-lyase activity [Evidence ISS] GO_process : GO:0009063 - amino acid catabolism [Evidence TAS]; GO:0009083 - branched chain family amino acid catabolism [Evidence ISS] codon_start : 1 note : branched chain keto acid dehydrogenase E1, beta polypeptide product : branched chain ketoacid dehydrogenase E1, beta polypeptide protein_id : NP_954665.1

name	EG666669 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260113 GeneID:666669 MGI:3643827
definition	codon_start : 1 product : hypothetical protein protein_id : XP_990387.2

name	LOC100039186 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039186
definition	number : 1 pseudo : _no_value

name	LOC100039186 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039186
definition	number : 2 pseudo : _no_value

name	LOC100039200 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039200
definition	number : 1 pseudo : _no_value

clone name	MSMg01-536L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111E19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-152D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513E07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-056D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139C21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-119E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224E04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-346P15.b	B6Ng01-346P15.g
ACC	GA128721	GA128722
length	1,224	252
definition	B6Ng01-346P15.b	B6Ng01-346P15.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcctaaacctgataaacagcttcggtgaagtagctggatataaaat taactcaaacaagtcaatggcctttctctacacaaagaataaacaggctg agaaagaaattagggaaacaacacccttttcaatagtcacaaataatata aaataccttggcgtgactctaactaaggaagtgaaagatctgtatgataa aaacttcaagtctctgaagaaagaaattaaagaagatctcagaagatgga aagatctcccatgctcatggattggcaggatcaacattgtaaaaatggct atcttgccaaaagcaatctacagattcaatgcaatccccatcaaaattcc aactcaattcttcaatgaattagaaagaacaatctgcaaattcatctgga ataacaaaaaacctaggatagcaaaaactcttctcaaggataaaagaacc tctggttgaatcaccatgcctgacctaaagatttactacagagcaattgt gataaaaactgcatggtactggtatagtgacagacaagtagaccaatgga atagaattgaagacccagaaatgaacccacacacctatggtcacttgatc ttcgacaagggagctaaaaccatccagtggaaaaaagacagcattttcaa caaatggtgctggcacaactggttgttatcatgtagaagaatgcgaatcg acccattcctctctccttgtactaaggtcaaatctaagtggatcaaggaa ctccacataaaaccagagacactgaaacttatagaggagaaagtggggaa aagtctcgaagatatgggcacagggaaaaaattcctgaatagaacagcaa tggcttgtgctgtaagatcgaggattgacaaatgggacctcatgaaactg caaagcttctgcaaggcaaaagacaccgtcaataagacaaaaagaccacc aacagattgggaaaggatctttacctatcttaaatcagataggggactaa tatcccatatatataaaggaactcagagggtggactcagaaaattcaaat aaccccattaaaaaatggggcttcagagctgaacaagattctcacccgag gaataccggaaagcttgagaaacacctgaaaatgtcaacatcctttatca ttcgagaatgcattgaaccatcctggaagaattcatctcacacagttcag aatgtggctttaggagattctacg	taaactaagaaaaggaagagctggcttctctaagacaggaaggaaggaag gaaggaaggaagggagggagggagggagggaagcaggggaaccaggggat agaatttaaacggttgaggtcaaactctaagtggagaagagctgagagga cagcttagtgtgaggcaccccgttctaacgagatggagagtgtcaagcat tgtgctccattattcaatatatagtgcctgaattgttgtcgtatcattta gg
quality values	Open. Hide. 58 36 22 41 58 62 62 62 54 62 62 62 62 62 62 47 56 62 62 62 62 38 62 62 62 62 62 54 44 56 62 43 38 45 59 44 28 43 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 59 62 56 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 59 54 54 54 62 62 62 62 62 62 62 59 62 62 49 49 62 62 62 54 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 54 62 59 59 62 62 59 59 59 62 62 62 62 62 62 59 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 56 62 62 56 56 56 62 54 62 62 62 62 62 62 62 54 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 58 54 58 58 58 54 58 58 58 58 58 54 58 58 58 58 54 58 58 58 52 52 58 54 58 58 58 58 54 52 54 54 54 41 52 58 58 41 58 49 47 58 58 58 54 54 58 58 58 54 54 54 46 52 54 49 37 58 58 52 54 58 58 54 54 58 58 52 58 53 58 53 58 58 58 58 58 58 58 54 58 52 47 58 58 58 41 58 58 58 58 52 51 47 50 52 54 51 58 54 54 54 54 58 46 54 46 50 48 48 41 53 51 49 41 50 39 49 44 58 58 58 58 58 51 50 51 41 53 53 53 47 46 53 58 54 49 32 49 51 39 48 44 47 58 51 39 58 49 58 58 51 33 40 46 37 49 51 54 58 58 54 51 51 53 53 52 52 53 39 53 58 53 52 35 58 51 39 58 25 28 51 34 40 44 54 50 53 49 40 42 44 49 35 51 51 39 49 51 53 51 39 50 37 46 44 49 52 41 27 34 45 38 39 33 33 16 41 32 54 40 37 45 42 37 51 39 39 54 51 31 33 45 24 27 54 54 38 30 29 51 28 34 28 52 40 46 34 51 44 44 42 46 26 52 39 18 23 27 32 33 40 32 52 47 32 32 21 53 40 53 35 33 35 22 32 34 18 51 49 40 32 40 41 49 49 41 45 49 49 46 31 34 32 45 33 33 53 45 31 35 20 18 32 43 45 40 29 28 40 27 43 51 35 33 46 46 51 51 46 30 31 18 35 30 45 31 29 29 25 26 31 41 32 31 31 41 41 31 31 46 46 26 30 35 42 31 42 35 43 37 32 25 33 25 30 29 31 26 31 24 43 31 24 30 30 25 31 23 46 25 27 31 46 31 26 22 31 32 36 35 36 37 34 46 30 26 31 31 31 24 25 25 28 32 41 38 34 33 31 25 22 12 20 22 16 35 37 46 25 11 24 6 8 16 32 32 27 38 26 22 42 21 27 14 28 17 21 44 44 48 31 5 17 18 28 16 28 16 10 7 7 8 11 20 14 33 31 48 25 25 36 16 25 29 21 25 27 31 48 6 8 29 34 20 14 16 18 29 32 21 36 21 32 33 24 12 21 20 13 28 48 43 17 19 19 26 37 10 21 19 21 14 32 11 29 16 16 24 21 31 24 29 11 39 33 8 8 16 14 14 28 21 30 10 20 8 43 26 6 8 21 5 6 12 13 8 11 24 29 27 27 7 9 7 18 30 14 16 6 13 14 28 28 22 18 17 12 7 30 28 34 18 27 12 27 47 40 21 13 7 5 10 7 11 28 8 13 27 9 17 6 6 10 17 8 4 3 5 16 16 15 17 21 28 25 5 6 5 17 11 6 20 16 17 25 8 5 16 25 4 3 2 7 15 19 17 7 22 28 12 10 12 21 23 21 6 14 3 18 13 4 6 10 7 9 5 5 4 5 5 16 7 25 8 3 3 6 4 3 8 13 9 8 4 1 5 2 4 5 5 3 4 1 4 3 6 6 15 4 13 11 6 12 5 7 5 4 5 8 7 13 19 6 9 6 6 6 6 4 6 22 6 7 4 6 16 10 6 12 10 3 4 6 8 4 4 11 8 5 14 5 4 6 7 18 5 4 5 4 10 4 3	Open. Hide. 62 59 62 30 34 34 27 23 13 28 25 28 34 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 59 62 62 62 59 62 59 62 62 62 62 62 62 62 54 62 62 62 62 56 49 54 38 38 49 56 59 62 62 62 62 49 49 49 62 59 62 54 54 54 54 49 42 54 62 62 54 54 62 49 46 46 23 50 35 35 56 43 34 31 34 34 34 11 13 16 24 23 19 29 23 18 34 18 30 31 13 12 10 13 34 18 27 13 40 25 32 16 33 13 18 13 27 17 23 28 29 29 21 20 18 38 34 23 29 23 34 39 13 35 13 22 21 18 34 18 46 30 50 38 39 39 34 41 51 43 23 10 23 27 21 28 33 20 34 23 34 39 38 18 18 16 22 23 30 49 24 23 11 9 13 11 15 15 39 27 30 30 34 49 18 34 21 16 13 18 18 16 10 16 21 23 14 23 18 18 18 20 13 13 23 10 10 13 18 10 13 16 21 22 9 18 9 18 17 28 13 24 10 16 28 18 24 12 27 12 20 23 13 12 10 10 13 16 8 11 10 11 12 10 10 11

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_83670796_83671047
seq2: B6Ng01-346P15.g_77_328

seq1  TAAACTAAGAAAAGGAAGAGCTGGCTTCTCTAAGACAGGAAGGAAGGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTAAGAAAAGGAAGAGCTGGCTTCTCTAAGACAGGAAGGAAGGAAG  50

seq1  GAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAAGCAGGGGAACCAGGGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAAGCAGGGGAACCAGGGGAT  100

seq1  AGAATTCAAACGGTTGAGGTCAAACTCTAAGTGGAGAAGAGCTGAGAGGA  150
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTAAACGGTTGAGGTCAAACTCTAAGTGGAGAAGAGCTGAGAGGA  150

seq1  CAGCTTAGTGTGAGGCACCCCGTTCTAACGAGATGGAGAGTGTCAAGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTAGTGTGAGGCACCCCGTTCTAACGAGATGGAGAGTGTCAAGCAT  200

seq1  TGTGCTCCAGTAGTCAATATATAGTGCCTGAATTGGTGTCGTATCAATTA  250
      ||||||||| || |||||||||||||||||||||| |||||||||| |||
seq2  TGTGCTCCATTATTCAATATATAGTGCCTGAATTGTTGTCGTATCATTTA  250

seq1  GG  252
      ||
seq2  GG  252

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information