CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGATCCGCGGAATT
CTTTATACTTTCCTTTATAATCATTGTCTGTTGACACTCTGTCAATATCT
TCTCACTATCTAAGCCAGACCTATCTTCCCCTTTGCGTATGTATGTGAAT
CACCATATGGTAGCTGTAAAATGATCTCCATGCCTCAGTTAGACCTGCCA
CTGGTCCGACGCGCTGAGACATGTCTCCAGCCCTGAGAATCCTATCCCAT
CTTGTACCTTACCACCTCCCTAGTTGTGATAAGATAACTGGCTCCGAGGT
TATCAAAGCATAATATGCATTTCTTGGAGAGCAGGCCTTGCATCTTACCT
GGGCAGCATAGTAGAGATGGCCCTGGATGCCAGCTGGCTTTGCTTCTTGT
CTGCTATGCTGTGGAATGGACAAGAGAAAGAGAGAGGGAGAGAGAGAGAG
AGAGAGAGAAAGAGAGAGAGAGAGAGACCCTTCCTCACCACCCTTGTCCC
TTGCTACCTATGGCAGGCTGGAGAGCTCGTCCCAGAGTCATGAGAGCAGG
AGAGATGGCCATGGGCCATGTCTCTCACTGTCTGCAATACGTGAGAGTGC
TCCTGCACCTTACCTCAGCAGCAGAGTAGAGCTGGCCCTGGTAGCAGAGA
TTGCAGGTAAGCTGGCCTCGAGGACATGAGAGCN

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAGCACCCTTGACGTTTCTGATGTTCAC
TGACTGTATGATATTTATTAGATTTATTCCGACCCTGATTTTCTATTTCT
GAAGACGATGCGACCGAATAACAATCTCCCGATCATGATACTCATATATG
AGATGCTTTGATGGCCTAGCTTAACTCATGCTTGGACATCTTTCTTGTTA
AATGAGGCTTGCTAAAGTTTTTTCAATTTGAACAGTGTGTCTCTATAATC
CAGTGCTAACAAAGCTAATAAAAATATTGGCTAAAATCTGAGGAAAACTG
TAGAACAAAACCACCTTCCATTGGGAACAGTTTATTTGTTCTTTTAGTGT
CTCCTTCTAAGTACACAGTAGGTGCCTAGTGTGCTCCCAGTAGGTAGACA
ATATTTGATGCAGATTTTCAAGAACAACTTAAGTAGTATTGACTTCAGAT
TTACAGCTTTCTCTGCTTCCTTTTATTCTTTTCTTTCTAAAATGCTTAAG
CGTATAGAGAAATAAAAACAGGGATTTGTGCTCCAGAACCAAACAAAAAA
TCCCAGAAAGGTGTGAGAGTCAGGGCTTGATAATGAAAGCTACAGGTACC
CAAGGTTTCTTACAGGAAGCTCAGATGCATTTATCACTTCAA

Query= MSMg01no046_k23.g1 MSMg01no046_k23.g1 CHROMAT_FILE:
MSMg01no046_k23.g1 PHD_FILE: MSMg01no046_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:54 2005
         (381 letters)



>mm_chr9_79365837_79366619
          Length = 783

 Score =  694 bits (359), Expect = 0.0
 Identities = 377/383 (98%), Gaps = 2/383 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttaactcatgcttggacatctttcttgttaaatgaggcttgctaaagttttttcaatttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ttaactcatgcttggacatctttcttgttaaatgaggcttgctaaagttttttcaatttg 524

                                                                       
Query: 61  aacagtgtgtctctataatccagtgctaacaaagctaataaaaatattggctaaaatctg 120
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 523 aacagtgtgtctctataatccagtgctaacaacgctaataaaaatattggctaaaatctg 464

                                                                       
Query: 121 aggaaaactgtagaacaaaaccaccttccattgggaacagtttatttgttcttttagtgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 aggaaaactgtagaacaaaaccaccttccattgggaacagtttatttgttcttttagtgt 404

                                                                       
Query: 181 ctccttctaagtacacagtaggtgcctagtgtgctcccagtaggtagacaatatttgatg 240
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ctccttctgagtacacagtaggtgcctagtgtgctcccagtaggtagacaatatttgatg 344

                                                                       
Query: 241 cagattttcaagaacaacttaagtagtattgacttcagatttacagctttctctgcttcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cagattttcaagaacaacttaagtagtattgacttcagatttacagctttctctgcttcc 284

                                                                       
Query: 301 ttttattcttttcttt-ctaaaatgcttaagcgtatagagaaataaaaacagggatttgt 359
           |||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 283 ttttattctttttttttctaaaatgcttaagcgtatagagaaatgaaaacagggatttgt 224

                                  
Query: 360 gctcca-gaaccaaacaaaaaat 381
           |||||| ||||||||||||||||
Sbjct: 223 gctccaagaaccaaacaaaaaat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 783
Length adjustment: 9
Effective length of query: 372
Effective length of database: 774
Effective search space:   287928
Effective search space used:   287928
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)