Query= MSMg01no047_h21.b1 MSMg01no047_h21.b1 CHROMAT_FILE:
MSMg01no047_h21.b1 PHD_FILE: MSMg01no047_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:51 2005
(648 letters)
>mm_chr9_92763032_92764081
Length = 1050
Score = 1147 bits (593), Expect = 0.0
Identities = 633/647 (97%), Gaps = 2/647 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctaaggcaaacagaaagaaagaaagaatgatcctttcttccatacaaacatct 63
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 204 ggaattcctaaggcaaacagaaagaaagaaagagtgatcctttcttccatacaaacatct 263
Query: 64 cccatgatactgtagctactcggaaatctgtgcccacatcaaatgcttcgctgggcagga 123
||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 264 cccatgatactgtagctactcagaaatctgtgcccacatcaaatgctgagctgggcagga 323
Query: 124 gaatgcttctccctgtcatcccagcacttcta--acagtgataggaagaaactacaagtg 181
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 324 gaatgcttctccctgtcatcccagcacttctaacacagtgacaggaagaaactacaagtg 383
Query: 182 aagcaggcctgagttgtgtaataagactgtgtctcaaaacaaaccaagaaatgtacaggt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aagcaggcctgagttgtgtaataagactgtgtctcaaaacaaaccaagaaatgtacaggt 443
Query: 242 actgtaagacccccattcggggacccccactagactcgggagagagagagtgcccaaaga 301
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 444 actgtaagacccccattcggggacccccgctagactcgggagagagagagtgcccaaaga 503
Query: 302 aacatgagaatccttcttgctgtaagcacatgaggcagtttaatggcggagctcgggatc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aacatgagaatccttcttgctgtaagcacatgaggcagtttaatggcggagctcgggatc 563
Query: 362 gaaacctatcttatgcaggagacagtgggttcgaccccgaggctcgaaagctagggtttt 421
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 564 gaaacctatcttatgcaggagacagtgggttcgaccccgaggctcgaaaactaggggttt 623
Query: 422 ttatggggtaaagggcttaggggtggggaattcagcataccgacacactattggcttatt 481
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 624 ttatggggtaaagggcttaggggtggggaattcagcatagcgacacactattggcttatt 683
Query: 482 caaacatcagcagaaaaattacatgcaggtcagggtgtcagagttctgtgagttattgac 541
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 684 caaacatcagcagaaaaattacatgcaggtcagggtgtcagagttctgtgagttgttgac 743
Query: 542 tcagttcagatagccctgttatgtcctcacattcctctttatctttttggtcaagctgtt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tcagttcagatagccctgttatgtcctcacattcctctttatctttttggtcaagctgtt 803
Query: 602 cccaggaatgcctgtgtttgtttttctttgttctcagcccaggcagc 648
|||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 804 cccaggaatgcctgggtttgtttttctttgttttcagcccaggcagc 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1050
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1040
Effective search space: 663520
Effective search space used: 663520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no047_h21.g1 MSMg01no047_h21.g1 CHROMAT_FILE:
MSMg01no047_h21.g1 PHD_FILE: MSMg01no047_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:51 2005
(509 letters)
>mm_chr9_92823795_92824703
Length = 909
Score = 984 bits (509), Expect = 0.0
Identities = 509/509 (100%)
Strand = Plus / Minus
Query: 1 tttcagtggagatcacaagcattagagacattaagagtgtggatcaagcctccaggaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tttcagtggagatcacaagcattagagacattaagagtgtggatcaagcctccaggaaca 517
Query: 61 gtggagtgaaggagtagatattttctaagctgatgttctaggagtcagggaaacttacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gtggagtgaaggagtagatattttctaagctgatgttctaggagtcagggaaacttacct 457
Query: 121 gtccaacttgaagccaggacagggggatgagacagatctttccaaatggcataagctgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gtccaacttgaagccaggacagggggatgagacagatctttccaaatggcataagctgct 397
Query: 181 gatactcgtcatatgtagagagttattaaatatggatatgagagtctgaggctaacagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gatactcgtcatatgtagagagttattaaatatggatatgagagtctgaggctaacagaa 337
Query: 241 tttatacaggatcatttcaaaatttttatgatgcaaaaaatggtcatactttggttacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tttatacaggatcatttcaaaatttttatgatgcaaaaaatggtcatactttggttacag 277
Query: 301 caaacagagttcccttttctttgcttgggagaatgtactcagagatgtgtgtgactaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 caaacagagttcccttttctttgcttgggagaatgtactcagagatgtgtgtgactaaca 217
Query: 361 tttgtccagggaagtttgacccgtccagcaggtccagttattcgagggtctcaaggggac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 tttgtccagggaagtttgacccgtccagcaggtccagttattcgagggtctcaaggggac 157
Query: 421 ctcctcctaagaaccaaatgggggttagagagggacgagggccttgtgcgaataacgaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ctcctcctaagaaccaaatgggggttagagagggacgagggccttgtgcgaataacgaca 97
Query: 481 cggaggcgttctggaatgcatcaaagccc 509
|||||||||||||||||||||||||||||
Sbjct: 96 cggaggcgttctggaatgcatcaaagccc 68
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
