XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTG
TAGACTTTTCATGATTCATGTAAAAATTTCACAGAAACTAATTGGGGACA
CCTTTTGTTCCTGTTGTTCTACTTATAACTTTGAAACCCTCACTAGGACA
AATCAGATATCACTCCTCTATCCCAGAAAAGGAAATGTGTTTTGGTTCAG
TAAGTAACATTAACTACTTCATATTCTATCTGGAGGCATACGTACATAAA
CTACCCAGTAGAGAGATTTAGGGAAGGACATTCAGAAACGCTGGTAGAAC
ACACATAGTGGATGTTATAAGTGAGCTTGCACTATAGAGTTCTGCATTCA
GCAGGTCTACCAGTCCTACCAGCAGAAGGTGCTGAGGCTATATAAGCTCC
TGTTGTGCCACCATGAGTCACATGTATCTACAGGGACAAATGCCAGGACT
TTGCTTGTTTCTGAGAACCCAGTTTGAAGAATAAAAGAATTATATATGTA
CATACATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGCGTGTGGCCTCTCCGACCCATGCCTCGCTGTGCATTCTGTTCGC
GTCCCCACGTGCCTTCTCCTTGTCTTTTCGGCGGCGTCCTTAAACGCTGT
CCTACTCGCATTTTAGGCTGTCGCTTTCGCTCTCGTGTTTTGTCTCTTTC
TTTTCCTTTTTCCCCTCCC

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXATCATCTGATTCAGAGCTACCAAGAGCTGGCTCC
CCGAGCCCATCCAGCGATGAGCACAGGCTCCTTTTCCTAGAGACCTCCGC
TAATTGATCTTTTTTTTTTTCCCTTTTTCCTCTTTTTCTTCTAATCTCTC
TCCAGGTATTCCTACCTAACCTTAACTTTTCCTCGGGTTCAAGACCCTTG
GAAAGGCCTGTATACTTATTTTGTGTACCATATTTCTTCTTTGTTCCTAC
TCTCTCTCCCCACTTTACTTCTGATAGCTTGTCCTGAATTTCCTCTAGAA
TTTTTAGCCCTATCTTAATCACTTGATAACATGTGAAAAGGAACAAAAGG
GCTCCTAACACCAGAAAAAATTCAAGGCCAAACATATTCCACTTTACTTC
TGATAGACTGTCTTGAATTTCCTTAGAAAGTTCAAGACCAGACTTACCTC
GTAAAGCTGTACTCACTGGTACTCTCGTTCCCCAGCTGAAAAGTTCTGAA
TTCATACAGTTGAATCCTTCTTAACAGTCTGCTTTACGGGAACCTTTATT
ACCGCGACCCGCAGTTCTGGTTCTGGAATGAGGGATCTTCCTTGTGCCAG
TCCCGAGTTTTTTCTCGTCCCGGGTTTCGGCACCAATTGTTATTAGACGC
GTTCTCACGACCGG

Query= MSMg01no052_o08.b1 MSMg01no052_o08.b1 CHROMAT_FILE:
MSMg01no052_o08.b1 PHD_FILE: MSMg01no052_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:39 2005
         (505 letters)



>mm_chr9_93463916_93464821
          Length = 906

 Score =  876 bits (453), Expect = 0.0
 Identities = 487/503 (96%), Gaps = 12/503 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgtagacttttcatg-attcatgtaaaaatttcacagaaactaattggggacac 63
           ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtagactttt-atgtattcatgtaaaaatttcacagaaactaattggggacac 263

                                                                       
Query: 64  cttttgttcctgttgttctacttataactttgaaaccctcactaggacaaatcagatatc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cttttgttcctgttgttctacttataactttgaaaccctcactaggacaaatcagatatc 323

                                                                       
Query: 124 actcctctatcccagaaaaggaaatgtgttttggttcagtaagtaacattaactacttca 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 actcctctatcccagaaaaggaaatgtgttttggttcagtaagtaacattaactacttca 383

                                                                       
Query: 184 tattctatctggaggcatacgtacataaactacccagtagagagatttagggaaggacat 243
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 384 tattctatctggaggcatacgtacataaactacccagtagagagatttagggaatgacat 443

                                                                       
Query: 244 tcagaaacgctggtagaacacacatagtggatgttataagtgagcttgcactatagagtt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcagaaacgctggtagaacacacatagtggatgttataagtgagcttgcactatagagtt 503

                                                                       
Query: 304 ctgcattcagcaggtctaccagtcctaccagcagaaggtgctgaggctatataagctcct 363
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctgcattcagcaggactaccagtcctaccagcagaaggtgctgaggctatataagctcct 563

                                                                       
Query: 364 gttgtgccaccatgagtcaca-tgtatctacagggacaaatgccaggactttgcttgttt 422
           ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 564 gttgtgccaccatgagtcacagtgtatctacatggacaaatgccaggactttgcttgttt 623

                                                                       
Query: 423 ctgagaacccagtttgaagaataaaagaattatatatgtacatacatatatatatatata 482
            |||||||||||||||||||||||||||||||||||||||||||  ||       |||||
Sbjct: 624 ttgagaacccagtttgaagaataaaagaattatatatgtacata--ta-------atata 674

                                  
Query: 483 tatatgtgtgtgtgtgtgtgtgt 505
           |||||||||||||||||||||||
Sbjct: 675 tatatgtgtgtgtgtgtgtgtgt 697


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 906
Length adjustment: 10
Effective length of query: 495
Effective length of database: 896
Effective search space:   443520
Effective search space used:   443520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)