Query= MSMg01no055_c09.b1 MSMg01no055_c09.b1 CHROMAT_FILE:
MSMg01no055_c09.b1 PHD_FILE: MSMg01no055_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:29 2005
(309 letters)
>mm_chr9_32242468_32243176
Length = 709
Score = 511 bits (264), Expect = e-149
Identities = 294/304 (96%)
Strand = Plus / Minus
Query: 5 gaattccagtctgcctggtggtcagaaacatccatgcctctaccgagatagaacctacta 64
||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 508 gaattccagtcaggttggtggtcagaaacatccatgcctctactgagatagaacctacta 449
Query: 65 ggagaacatgacctcgaatagagactccactgagaggatcatgtaggcacaggccctagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ggagaacatgacctcgaatagagactccactgagaggatcatgtaggcacaggccctagg 389
Query: 125 acatctgaccatccccaaacacagacaacaccttacttattggcatcactgaggttggca 184
|||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 388 acatctgaccgtccccaaacacagatgacaccttacttattggcatcactgaggttggca 329
Query: 185 agcagacccatgttttccaagcataaacagcacagacactgccagcctgcccagcaaaaa 244
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 328 agcagacccaggttttccaagcataaacagcacagacactgccagcctggccagcaaaaa 269
Query: 245 acagaaattcagcgagaagtgaatcttttttccaccaagcatagagagcagggggcccag 304
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 268 acagaaattcagcgagaagtgaatcttttttccactaagcatagagagcagggggcccag 209
Query: 305 tgtg 308
||||
Sbjct: 208 tgtg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 709
Length adjustment: 9
Effective length of query: 300
Effective length of database: 700
Effective search space: 210000
Effective search space used: 210000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no055_c09.g1 MSMg01no055_c09.g1 CHROMAT_FILE:
MSMg01no055_c09.g1 PHD_FILE: MSMg01no055_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:29 2005
(348 letters)
>mm_chr9_32097949_32098696
Length = 748
Score = 576 bits (298), Expect = e-169
Identities = 329/348 (94%), Gaps = 14/348 (4%)
Strand = Plus / Plus
Query: 1 aagaatgaagctcttcccgagagagacaacagggtgtcagggaatgactaagcagtcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagaatgaagctcttcccgagagagacaacagggtgtcagggaatgactaagcagtcctc 260
Query: 61 aaagtggaaaatgtctccaggagcctggagtacagcgggtcataggagacatggactgag 120
||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 261 aaagtggaaaatgtctccaggagcctggagtacagtgggtcataggagacacggactgag 320
Query: 121 ggctgtgacatccaggagagaagagaagaatggtgacagcaccgtgatacagaacaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggctgtgacatccaggagagaagagaagaatggtgacagcaccgtgatacagaacaagaa 380
Query: 181 aacctctgaggtagaaatgaggtagatggggtgctgaaccgaaggcctcctgttgtcctt 240
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 381 aacctctgaggtagaaatgagggagatggggtgctgaaccgaaggcctcctgttgtccct 440
Query: 241 ggctctttctggtccacacagatgtgttcttactcatgagcttggtaatgaaattgttgt 300
|||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 ggctctttctggtccacacagatg--------------agcttggtaatgaaattgttgt 486
Query: 301 cagctgttgtccctgccagtgtttgtgggtacccattaagttcccaga 348
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tagctgttgtccctgccagtgtttgtgggtacccattaagttcccaga 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
