Query= MSMg01no055_l16.b1 MSMg01no055_l16.b1 CHROMAT_FILE:
MSMg01no055_l16.b1 PHD_FILE: MSMg01no055_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:12 2005
(652 letters)
>mm_chr9_32622424_32623475
Length = 1052
Score = 1170 bits (605), Expect = 0.0
Identities = 638/649 (98%), Gaps = 2/649 (0%)
Strand = Plus / Plus
Query: 5 gaattcctttgtatcatttcttatcagatatatcattaatgtccttgcctaggattgata 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctttgtataatttcttatcagatatatcattaatgtccttgcctaggattgata 264
Query: 65 agcattctatggactgaaaaggactgaaaagttactgtgagcttatttgagctaatcttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agcattctatggactgaaaaggactgaaaagttactgtgagcttatttgagctaatcttt 324
Query: 125 caaagatgagggactttattttcaatttctttgggggatccaaaatgccatgcaaatgac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caaagatgagggactttattttcaatttctttgggggatccaaaatgccatgcaaatgac 384
Query: 185 cagtgtgggtcgcttaattgtttggggtcagacaaaatctggcaggggaggatgggcttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagtgtgggtcgcttaattgtttggggtcagacaaaatctggcaggggaggatgggcttt 444
Query: 245 ggttttgcaaattgatgattgcacaaactggggaatggataacaacttctcttttccaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggttttgcaaattgatgattgcacaaactggggaatggataacaacttctcttttccaga 504
Query: 305 atggctttctcagcatatggcaaccacaaccaagttagcaggatcctgaagcaagcaggc 364
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atggctttctcagcatatgggaaccacaaccaagttagcaggatcctgaagcaagcaggc 564
Query: 365 agg-catggaccaagttccagagaataacatggtgaatccagggggttatccttacctca 423
|| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 565 -ggacatggaccaaattccagagaataacatggggaatccagggggttatccttacctca 623
Query: 424 cataaggatgtatatatggctcacatgaggacactaagcttcttcttagccttcttcaac 483
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cataaggatgtatatatagctcacatgaggacactaagcttcttcttagccttcttcaac 683
Query: 484 ttcttctcagtctcatttattacaccagaacactcaactgctggtcgcttggtccgccac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttcttctcagtctcatttattacaccagaacactcaactgctggtcgcttggtccgccac 743
Query: 544 tgttacatcctcttctgaaaaactcaaaggaagcagagtgacgttctgcctgtagttggc 603
||||||||||||||||||||| ||| ||||||||| |||||| |||||||||||||||||
Sbjct: 744 tgttacatcctcttctgaaaagctcgaaggaagcacagtgacattctgcctgtagttggc 803
Query: 604 acagcagtgagatcagtatgcacactacatatgcggtctgctttataac 652
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 acagcagtgagatcagtatgcacactacatatgcggtctgctttataac 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no055_l16.g1 MSMg01no055_l16.g1 CHROMAT_FILE:
MSMg01no055_l16.g1 PHD_FILE: MSMg01no055_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:12 2005
(460 letters)
>mm_chr9_32725109_32725967
Length = 859
Score = 835 bits (432), Expect = 0.0
Identities = 453/460 (98%), Gaps = 1/460 (0%)
Strand = Plus / Minus
Query: 1 actttgtaacctaggcaggctttaaacttgctatcctcctgctccagcgtccagattggt 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 752 actttgtaacctaggcaggctttgaacttgctatcctcctgctccagcgtccagattggt 693
Query: 61 tggaaagggaggcctgtgatatcaggtctggctaccatgtggcttctttagaggggcaat 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 692 tggaaagggaggcctgtgataccaggtctggctaccatgtggcttctttagaggggcaat 633
Query: 121 ttccactttacaagtctgagagtgaaaacatttttctgatgggttttatcatttttcaaa 180
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 632 ttccactttac-agtctgagagtgaatacatttttctgatgggttttatcatttttcaaa 574
Query: 181 aatggatctaatcaaagaattccatctgaacaaaattatccacagcctagtgacacccat 240
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 573 agtggatctaatcaaagaattccatctgaacaaatttatccacagcctagtgacacccat 514
Query: 241 aaatttagtctggaggtattacacataacccatcagtgtgatctcaagaagattgtatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 aaatttagtctggaggtattacacataacccatcagtgtgatctcaagaagattgtatac 454
Query: 301 tgagccttatctttaaggaattcataggtaagagaaggcatgtagctgttgatttcaaca 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tgagccttatctttgaggaattcataggtaagagaaggcatgtagctgttgatttcaaca 394
Query: 361 tcatatggtaaattctaattatctcttaaaaagaagcgttgagtgtaatttgatgaacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tcatatggtaaattctaattatctcttaaaaagaagcgttgagtgtaatttgatgaacca 334
Query: 421 aggaaaggaagcagatctagctggttctgtgtgtgtgtgt 460
||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aggaaaggaagcagatctagctggttctgtgtgtgtgtgt 294
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 859
Length adjustment: 10
Effective length of query: 450
Effective length of database: 849
Effective search space: 382050
Effective search space used: 382050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
