Query= MSMg01no055_p12.b1 MSMg01no055_p12.b1 CHROMAT_FILE:
MSMg01no055_p12.b1 PHD_FILE: MSMg01no055_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:30 2005
(293 letters)
>mm_chr9_97163428_97164120
Length = 693
Score = 458 bits (237), Expect = e-133
Identities = 264/273 (96%)
Strand = Plus / Plus
Query: 21 aaagctgtctgggctgtgagtcttgctggatcaggctactatccacacatgaatttggat 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 aaagctgtctgggctgtgagtcttgctggatcaggctactatccacacatgaatttggat 280
Query: 81 ttattcactgtgttattctggttttcccatgcttgctaaggggatgctagggatacagtc 140
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 281 ttattcactgtgttattctggtttccccatgcttgctaaggggatgctagggatacagtc 340
Query: 141 tgtaatcctttcctaggaagagattctggattgctagggttctgtctatctataccatct 200
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 341 tgtaatcctttcctaggaagagattctggattgctagggttctgtctatttataccatct 400
Query: 201 cgcatctggaacgttagcactctgaattactaaacaggattcacctctcaccaactatgg 260
| || |||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 401 cacagctggaatgttagcactctgaattacaaaacaggattcacctctcaccaactatgg 460
Query: 261 cctaaagacaggttctattttctttttctactc 293
||| ||||||| ||||||||||||||||||||
Sbjct: 461 ccttcagacaggctctattttctttttctactc 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no055_p12.g1 MSMg01no055_p12.g1 CHROMAT_FILE:
MSMg01no055_p12.g1 PHD_FILE: MSMg01no055_p12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:30 2005
(364 letters)
>mm_chr9_97258298_97259061
Length = 764
Score = 659 bits (341), Expect = 0.0
Identities = 360/369 (97%), Gaps = 5/369 (1%)
Strand = Plus / Minus
Query: 1 caaaggaacaatgctccctgtgaagacgacaaggtgtgaaatctagcaaagatgcacagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 caaaggaacaatgctccctgtgaagacgacaaggtgtgaaatctagcaaagatgcacagc 690
Query: 61 agccagttaaatcagcatttctcacagaggacaattgaagcttgtagtacaagaatatcc 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 agccaattaaatcagcatttctcacagaggacaattgaagcttgtagtacaagaatatcc 630
Query: 121 catgtaatatttaaaacatatttatactaaaactacttttggtttctctggcagtt---- 176
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 629 catgtaatatttaaaacatatttatactaaaactacttttggtttctctggtagttaaaa 570
Query: 177 -taaaaaaaaaaagacacggagcaggtcaggttggctccatgaagcaaaggaacaaacta 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aaaaaaaaaaaaagacacggagcaggtcaggttggctccatgaagcaaaggaacaaacta 510
Query: 236 tggttgttgtgatggagagctgatgcttatctgaattcccagtgacggcacactcatgag 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tggttgttgtgatggagagctgatgcttatctgaattcccagtgacggcacactcatgag 450
Query: 296 tgccattgtaatgacattgagaatactgggacaggcaagagctatcgtgctatataactg 355
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 449 tgccattgtaatgacattgagaatactgggacaggcaagagctatcgtactatataactg 390
Query: 356 tggaggtgt 364
|||||||||
Sbjct: 389 tggaggtgt 381
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space: 268025
Effective search space used: 268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
