Query= MSMg01no056_f13.b1 MSMg01no056_f13.b1 CHROMAT_FILE:
MSMg01no056_f13.b1 PHD_FILE: MSMg01no056_f13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:59 2005
(294 letters)
>mm_chr9_29141191_29141884
Length = 694
Score = 516 bits (267), Expect = e-151
Identities = 285/291 (97%)
Strand = Plus / Plus
Query: 1 tcaaagttacccatataacctcataagcctgagccttcaatgacctctgcacctactgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 201 tcaaagttacccatataacctcataagcctgagccttcaatgacctctgcagctactact 260
Query: 61 tgacattctctgctttctctgcaagacggtgctcctgataaccttggaaacctcatgaag 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgacattctctgcttcctctgcaagacggtgctcctgataaccttggaaacctcatgaag 320
Query: 121 aaggtgagcaattatcctaaagattccatctctggatgagccctgaggcaggcaccattg 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaggtgggcaattatcctaaagattccatctctggatgagccctgaggcaggcaccattg 380
Query: 181 tcaatcaaagcaccatactgaagtgacagtgttgactgacagatatctattgctcatgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaatcaaagcaccatactgaagtgacagtgttgactgacagatatctattgctcatgac 440
Query: 241 aaacatttattgatttgtgtgttgtgcaaactattgctcctctaattttta 291
||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 aaacatttagtgatttgtgtgttgtgcaaactattgttcctctaattttta 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no056_f13.g1 MSMg01no056_f13.g1 CHROMAT_FILE:
MSMg01no056_f13.g1 PHD_FILE: MSMg01no056_f13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:59 2005
(236 letters)
>mm_chr9_29231611_29232245
Length = 635
Score = 437 bits (226), Expect = e-127
Identities = 232/234 (99%), Gaps = 1/234 (0%)
Strand = Plus / Minus
Query: 1 tatggaaaaccaattgcttcccaccgtgcccttgaagataggctggcacacgggaggcag 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 433 tatggaaaaccaattgcttcccaccgtgcccttgaagataggctggcaca-gggaggcag 375
Query: 61 tgaggcagagcaccgggggcttaaagacggtttacaaaccagccctgcttctgagcagcc 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 374 tgaggcagagcaccgggggcttaaagacggtttataaaccagccctgcttctgagcagcc 315
Query: 121 cagcctctggaaggaatatgtcaagcatagcttcatagctaaatcaggggccatgttcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cagcctctggaaggaatatgtcaagcatagcttcatagctaaatcaggggccatgttcaa 255
Query: 181 gaaacagtgagtgttatgcactcttctatggctaagagtgaaaagtaagtgtgt 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gaaacagtgagtgttatgcactcttctatggctaagagtgaaaagtaagtgtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 635
Length adjustment: 9
Effective length of query: 227
Effective length of database: 626
Effective search space: 142102
Effective search space used: 142102
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
