Query= MSMg01no057_o06.b1 MSMg01no057_o06.b1 CHROMAT_FILE:
MSMg01no057_o06.b1 PHD_FILE: MSMg01no057_o06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:00 2005
(508 letters)
>mm_chr9_81935964_81936869
Length = 906
Score = 841 bits (435), Expect = 0.0
Identities = 466/477 (97%), Gaps = 2/477 (0%)
Strand = Plus / Minus
Query: 1 aattctggagtctgacagtaagaaacaaattaattttttcaaggtctttcattaagtaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aattctggagtctgacagtaagaaacaaattaattttttcaaggtctttcattaagtaac 616
Query: 61 ttacaactaacaataaaactgtaaatgaatcctacagaaaataagcatcaacagcattcc 120
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 615 ttacaactaacaataaaaccataaatgaatcctatggaaaataagcatcaacagcattcc 556
Query: 121 atggaacagtctgctaattcaacttccggcttgtgcacctaaactctatagtttattttt 180
|||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 555 atggaacagtctgctaattcaacttctggcttgtgctcctaaactctatagtttatttta 496
Query: 181 aatataatgacagatgaggtgcaaatgtggattaggtcaagtaattcccaagtccaaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aatataatgacagatgaggtgcaaatgtggattaggtcaagtaattcccaagtccaaatc 436
Query: 241 tttggatggcttccaaacacatccaaattcctaaaccttccctaaagtaattcttgaaca 300
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 435 tttggatggcttccaa--acatccaaattcctaaaccttccccaaagtaattcttgaaca 378
Query: 301 tagaaaattctacatgacttacctcaggtctttgactgatgtccccaacatcacagtgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tagaaaattctacatgacttacctcaggtctttgactgatgtccccaacatcacagtgga 318
Query: 361 tgtagcatattaatcttattttaagagctctccaagaaatttctgctgcggtggacttgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 317 tgtagcatattaatcttattttaagagctctccaagaaatttctgctgcgggggacttgg 258
Query: 421 caactattcctgtcttcttgaaatgacttttgtcatattttcttgtgatctgctctt 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 caactattcctgtcttcttgaaatgacttttgtcatattttcttgtgatctgctctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 906
Length adjustment: 10
Effective length of query: 498
Effective length of database: 896
Effective search space: 446208
Effective search space used: 446208
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no057_o06.g1 MSMg01no057_o06.g1 CHROMAT_FILE:
MSMg01no057_o06.g1 PHD_FILE: MSMg01no057_o06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:00 2005
(382 letters)
>mm_chr9_81841900_81842685
Length = 786
Score = 679 bits (351), Expect = 0.0
Identities = 371/379 (97%), Gaps = 4/379 (1%)
Strand = Plus / Plus
Query: 1 aggaaattagtagcgattcctactaggaaatgagaaagccttcactcactagaacgttgc 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggaaattagtagggattcctactaggaaatgagaaagccttcactcactagaacgttgc 260
Query: 61 ataggctccctcagtctacattttatcatttgaaaaatggattagaagataataaaatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataggctccctcagtctacattttatcatttgaaaaatggattagaagataataaaatgt 320
Query: 121 tattcatggaagtactatgtaaatgtgtaaacctttatgcaaatgttctcattttagtgt 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattcatggaagtactttgtaaatgtgtaaacctttatgcaaatgttctcattttagtgt 380
Query: 181 tagaggtagctgtctttgtggagtgagagatgatatgtcagtgtcaaataatcactaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagaggtagctgtctttgtggagtgagagatgatatgtcagtgtcaaataatcactaaaa 440
Query: 241 ctattgtgaagatgtgttcaaaataaatccccaaatacccatgcctgccatatcctaaga 300
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 441 ctattgtgaagatgtgttcaaaataaatccccaaatatctatgcctgccatatcctaaga 500
Query: 301 tgaataatttagtaatcagaggtatcaat--gttccataatga--ttttttaaagattta 356
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 501 tgaataatttagtaatcagaggtatcaatatgttccataatgagtttttttaaagattta 560
Query: 357 ttcattttatatataagta 375
|||||||||||||||||||
Sbjct: 561 ttcattttatatataagta 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 786
Length adjustment: 9
Effective length of query: 373
Effective length of database: 777
Effective search space: 289821
Effective search space used: 289821
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
