Query= MSMg01no059_c01.b1 MSMg01no059_c01.b1 CHROMAT_FILE:
MSMg01no059_c01.b1 PHD_FILE: MSMg01no059_c01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:33 2005
(659 letters)
>mm_chr9_99857660_99858719
Length = 1060
Score = 1201 bits (621), Expect = 0.0
Identities = 645/653 (98%), Gaps = 1/653 (0%)
Strand = Plus / Minus
Query: 8 gaattctcatagttgcttaatgttcttcttaataggcagtaaggtagagcgctcccctac 67
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 gaattctcatagttgtttaatgttcttcttaataggcagtaaggtagagcgctcccctac 801
Query: 68 tgccagggttggctcagcctcagcttttgtataaaactccaatggccatgtttccctcca 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tgccagggttggctcagcctcagcttttgtataaaactccaatggccatgtttccctcca 741
Query: 128 aagcacatcacccggtctcttcagcacacctgctcccagccctgagcataccacatcaat 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aagcacatcacccggtctcttcagcacacctgctcccagccctgagcataccacatcaat 681
Query: 188 catctacccccgccctcaaccaaggctcttccccagccctcccagtctatcccaccctct 247
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 680 catctacccccgccctcaaccaagactcttccccagccctcccagtctatcccaccctct 621
Query: 248 ctgccctgagcaattctggtcctccagtgcccaagccgcaactgcccattacctgggaga 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctgccctgagcaattctggtcctccagtgcccaagccgcaactgcccattacctgggaga 561
Query: 308 gttaataagaaattcaccttccctccct-gcacaaatgaattccagtcagttcattctcc 366
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 560 gttaataagaaattcaccttccctccctggcacaaatgaattccagtcagttcattctcc 501
Query: 367 caggaaataaattttaaaatggaaattaaacaaaacaattgctagcaaaggtaataatgg 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 caggaaataaattttaaaatggaaattaaacaaaacaattgctagcaaaggtaataatgg 441
Query: 427 gtcgtccctgaattctgcctctgagaggaatacattaccgttcccaaggccacagcaggc 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtcgtccctgaattctgcctctgagaggaatacattaccgttcccaaggccacagcaggc 381
Query: 487 tgagagaagcattgctggccccaaagctgcatggtgctcagacttgcaagcctgtggctg 546
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 380 tgagagaagcattgctggtcccaaagctgcatggtgctcagacttgcaagcctgtagctg 321
Query: 547 tgctgtccaaaccctggtactccatcaggctgctgagtgggtctcagaaccacacagctt 606
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 320 tgctgtccaaaccctggtactccatcaggctgctgagcaggtctcagaaccacacagctt 261
Query: 607 ctaaaaattccctgagtgtacacatgcacacttgtgctggatttcctgtgacc 659
||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 260 ctaaaaattccctgattgtacacatgcacacttgtgctggatttcctgtgacc 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1060
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1050
Effective search space: 681450
Effective search space used: 681450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_c01.g1 MSMg01no059_c01.g1 CHROMAT_FILE:
MSMg01no059_c01.g1 PHD_FILE: MSMg01no059_c01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:33 2005
(594 letters)
>mm_chr9_99770959_99771954
Length = 996
Score = 1036 bits (536), Expect = 0.0
Identities = 574/597 (96%), Gaps = 18/597 (3%)
Strand = Plus / Plus
Query: 1 aaatgactcgaaattcattgtccacttggacaatggtgacgaggcctgaaccgagaaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatgactcgaaattcattgtccacttggacaatggtgacgaggcctgaaccgagaaggg 260
Query: 61 gcagaagggaacgataatccgccaagtcagagctggctccaccgcttgccaagttttcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcagaagggaacgataatccgccaagtcagagctggctccaccgcttgccaagttttcag 320
Query: 121 ggttctggcagcccgttctctctccagagaacctgccgggccaggaggagttcgtgcagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggttctggcagcccgttctctctccagagaacctgccgggccaggaggagttcgtgcagg 380
Query: 181 tggcgcgatgcggtgaaagtccctaggctctacctggactgaattatcatcctgctttgg 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 tggcgcgatgcggtgaaagtccctaggctctacctggaccgaattatcatcctgctttgg 440
Query: 241 atcagtgaagattcctggaggttaggtggcttctgctttaaaaagcaaaccttaaggagt 300
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 441 atcagtgaagattcctggaggttgggtggcttcggctttaaaaagcaaaccttaaggagt 500
Query: 301 ctcaggtgtcagtcactcacaactcagtgtgttctactcgaagtagccg---tagccggc 357
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 ctcaggtgtcagtcactcacaactcagtgtgttctactcgaagtagccgaagtagccggc 560
Query: 358 cttcttcatctgtaaagttaggtttcctaagaaaattgacccttgaacaggaaggccagg 417
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 561 cttcttcatctgtaaagttaggtttcgtaagaaaattgacccttgaacaggaaggccag- 619
Query: 418 aaactggaagggaataaagtttggggagtaggactcanataagagaaaccacacacacac 477
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 620 aaactggaagggaataaagtttggggagtaggactcaaataagagaaaccacacacacac 679
Query: 478 acacacacacacacacacacacacacacacacacacacacacacgaaccgcgaagttttg 537
|||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 680 acacacacacacacacacacacacacacac--------------gaaccgcgaagttttg 725
Query: 538 tggaggccagaaggtgaagtgaggcaacatgcctaatctctcaaaagtctggaccag 594
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 tggaggccagaaggtgaagtgaggcaacatgcctaatctctcaaaagtctggaccag 782
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 71
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 996
Length adjustment: 10
Effective length of query: 584
Effective length of database: 986
Effective search space: 575824
Effective search space used: 575824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
