Query= MSMg01no059_h11.b1 MSMg01no059_h11.b1 CHROMAT_FILE:
MSMg01no059_h11.b1 PHD_FILE: MSMg01no059_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:58 2005
(654 letters)
>mm_chr9_112512677_112513730
Length = 1054
Score = 1137 bits (588), Expect = 0.0
Identities = 636/652 (97%), Gaps = 4/652 (0%)
Strand = Plus / Minus
Query: 5 gaattccttaagtgg-catattgag-tttaagaacacaaatataaaatagctttttttgg 62
||||||||||||||| |||||||| ||| ||||||||||||||||||||| ||||||||
Sbjct: 854 gaattccttaagtggaaatattgagtttttagaacacaaatataaaatagc-ttttttgg 796
Query: 63 taatgataccagttgtataatgctcaaaccttgcagaacaattcaatcataaaatgagaa 122
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 795 taatgataccagttgtataatgctcaaaccttgcagagcaattcaatcataaaatgagaa 736
Query: 123 gagcgggagccatggttcacttacagtgaaggggtttagaagagtcttggggagaactgg 182
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 735 gagcgggagccatggttcacttgcagtgaaggggtttagaagagtcttggggagaactgg 676
Query: 183 gtctcatttgtatcttgatctaaggatagtcagaaagtcggtgttttcctgacttctgtt 242
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 675 gtctcatttgtatcttgatctaaggatagtcagaaagtcagtgttttcctgacttctgtt 616
Query: 243 acattcctgtgaccagtcatctgaggctgagtgccttggattaaattgaatctacttaac 302
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 615 acattcctgtgaccagtcatctgaggctgagtgccttggattaaattcaatctacttaac 556
Query: 303 acagttttatatactgttctagattgggcagatccaactgttggacctctggtaaagact 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 acagttttatatactgttctagattgggcagatccaactgttggacctctggtaaagact 496
Query: 363 ttggcttcatcatagccaaggagatgatatctcagtcagagtcatttagattgagaaagg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ttggcttcatcatagccaaggagatgatatctcagtcagagtcatttagattgagaaagg 436
Query: 423 taactgaggagggaactggtaagaagtgcgaaaccagagagaaaaaaaatctcactcata 482
|||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||
Sbjct: 435 taactgaggagggaactggtaagaagtgggaaaccagagagaaaacag-tctcactcata 377
Query: 483 tagcaaacatttctcgggctcatcctgctttagaaacttgacagatcaaggagacagaat 542
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tagcaaacatttcttgggctcatcctgctttagaaacttgacagatcaaggagacagaat 317
Query: 543 tatcactcatgggggtagcccatggcctccttaccttccataaggccccacttacccaaa 602
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 316 tatcactcatgggggtagcccatggcctccttaccttccatgaggccccacttacccaaa 257
Query: 603 ctatcactttcattcagagagcatactgtaaggagtctaatggcttcctgtg 654
|||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 256 ctatcactttcattcagagagcatactgtaaggagtctaagggcttcctgtg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_h11.g1 MSMg01no059_h11.g1 CHROMAT_FILE:
MSMg01no059_h11.g1 PHD_FILE: MSMg01no059_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:59 2005
(437 letters)
>mm_chr9_112434765_112435602
Length = 838
Score = 770 bits (398), Expect = 0.0
Identities = 424/438 (96%), Gaps = 13/438 (2%)
Strand = Plus / Plus
Query: 1 cttgggtcacaaaatggctcatatgtcaggatggaatgacacaccacgtgagtgtgtctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttgggtcacaaaatggctcatatgtcaggatggaatgacacaccacgtgagtgtgtctg 260
Query: 61 tgtggtagggtctggggagggctttgagttagaaaccaggacaatggaaaaagtcaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtggtagggtctggggagggctttgagttagaaaccaggacaatggaaaaagtcaagaa 320
Query: 121 gacacaggctactctaagatttaacacaagacccaccccc-ttgttatcagctacctgcc 179
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 gacacaggctactctaagatttaacacaagacccaccccccttgttatcagctacctgcc 380
Query: 180 cagtccaccctgtctaagaaatcttaaataggtacctctgggaaacatgagaagagaatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagtccaccctgtctaagaaatcttaaataggtacctctgggaaacatgagaagagaatt 440
Query: 240 acttgcctgatgtctggttagaacatgctcaaagcccactgaagataaaagcttgtttgt 299
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acttgcctgaagtctggttagaacatgctcaaagcccactgaagataaaagcttgtttgt 500
Query: 300 ggtaattctaatctactatttatttatttatttatttatttatttatttattatatttat 359
|||||||||||||||||||||||||||||||||||| || |||||||||| ||||||
Sbjct: 501 ggtaattctaatctactatttatttatttatttatt-at--atttatttat---atttat 554
Query: 360 ttatatttatttatttattcatccattcattcattcagcagaaggttagatatgatgtat 419
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ttat------ttatttattcatccattcattcattcagcagaaggttagatatgatgtat 608
Query: 420 ctcattcaagtaaatgcc 437
||||||||||||||||||
Sbjct: 609 ctcattcaagtaaatgcc 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 838
Length adjustment: 9
Effective length of query: 428
Effective length of database: 829
Effective search space: 354812
Effective search space used: 354812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
